Experiment: Hydantoin (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu5062 and Atu5063 are separated by 19 nucleotides Atu5063 and Atu5064 are separated by 245 nucleotides Atu5064 and Atu5065 are separated by 132 nucleotides
Atu5062: Atu5062 - ABC transporter nucleotide binding/ATPase (glycerol-3-phosphate), at 60,700 to 61,743
Atu5062
Atu5063: Atu5063 - RpiR family transcriptional regulator, at 61,763 to 62,641
Atu5063
Atu5064: Atu5064 - MarR family transcriptional regulator, at 62,887 to 63,339
Atu5064
Atu5065: Atu5065 - non-heme chloroperoxidase, at 63,472 to 64,293
Atu5065
Position (kb) 61
62
63 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 60.853 kb on + strand, within Atu5062 at 60.854 kb on + strand, within Atu5062 at 60.878 kb on - strand, within Atu5062 at 60.889 kb on + strand, within Atu5062 at 60.897 kb on - strand, within Atu5062 at 60.960 kb on + strand, within Atu5062 at 61.068 kb on + strand, within Atu5062 at 61.104 kb on + strand, within Atu5062 at 61.111 kb on + strand, within Atu5062 at 61.116 kb on + strand, within Atu5062 at 61.124 kb on - strand, within Atu5062 at 61.156 kb on + strand, within Atu5062 at 61.164 kb on - strand, within Atu5062 at 61.164 kb on - strand, within Atu5062 at 61.221 kb on - strand, within Atu5062 at 61.226 kb on + strand, within Atu5062 at 61.258 kb on + strand, within Atu5062 at 61.266 kb on - strand, within Atu5062 at 61.266 kb on - strand, within Atu5062 at 61.266 kb on - strand, within Atu5062 at 61.266 kb on - strand, within Atu5062 at 61.271 kb on - strand, within Atu5062 at 61.304 kb on - strand, within Atu5062 at 61.318 kb on + strand, within Atu5062 at 61.441 kb on + strand, within Atu5062 at 61.456 kb on + strand, within Atu5062 at 61.459 kb on - strand, within Atu5062 at 61.474 kb on - strand, within Atu5062 at 61.485 kb on - strand, within Atu5062 at 61.523 kb on + strand, within Atu5062 at 61.523 kb on + strand, within Atu5062 at 61.531 kb on - strand, within Atu5062 at 61.565 kb on + strand, within Atu5062 at 61.565 kb on + strand, within Atu5062 at 61.573 kb on - strand, within Atu5062 at 61.573 kb on - strand, within Atu5062 at 61.573 kb on - strand, within Atu5062 at 61.786 kb on + strand at 61.814 kb on - strand at 61.873 kb on - strand, within Atu5063 at 61.873 kb on - strand, within Atu5063 at 61.916 kb on + strand, within Atu5063 at 61.916 kb on + strand, within Atu5063 at 61.922 kb on + strand, within Atu5063 at 61.930 kb on - strand, within Atu5063 at 61.961 kb on - strand, within Atu5063 at 61.999 kb on - strand, within Atu5063 at 62.057 kb on - strand, within Atu5063 at 62.093 kb on + strand, within Atu5063 at 62.093 kb on + strand, within Atu5063 at 62.093 kb on + strand, within Atu5063 at 62.093 kb on + strand, within Atu5063 at 62.093 kb on + strand, within Atu5063 at 62.101 kb on - strand, within Atu5063 at 62.126 kb on + strand, within Atu5063 at 62.126 kb on + strand, within Atu5063 at 62.136 kb on + strand, within Atu5063 at 62.172 kb on + strand, within Atu5063 at 62.225 kb on + strand, within Atu5063 at 62.391 kb on + strand, within Atu5063 at 62.459 kb on + strand, within Atu5063 at 62.493 kb on + strand, within Atu5063 at 62.511 kb on + strand, within Atu5063 at 62.546 kb on + strand, within Atu5063 at 62.625 kb on + strand at 62.625 kb on + strand at 62.663 kb on - strand at 62.666 kb on - strand at 62.699 kb on + strand at 62.718 kb on - strand at 62.733 kb on - strand at 62.745 kb on + strand at 62.754 kb on - strand at 62.768 kb on + strand at 62.776 kb on - strand at 62.789 kb on + strand at 62.789 kb on + strand at 62.789 kb on + strand at 62.826 kb on - strand at 62.843 kb on + strand at 62.848 kb on - strand at 62.967 kb on + strand, within Atu5064 at 62.967 kb on + strand, within Atu5064 at 63.039 kb on - strand, within Atu5064 at 63.068 kb on - strand, within Atu5064 at 63.211 kb on - strand, within Atu5064 at 63.211 kb on - strand, within Atu5064 at 63.216 kb on - strand, within Atu5064 at 63.216 kb on - strand, within Atu5064 at 63.244 kb on - strand, within Atu5064 at 63.244 kb on - strand, within Atu5064 at 63.244 kb on - strand, within Atu5064 at 63.244 kb on - strand, within Atu5064 at 63.244 kb on - strand, within Atu5064 at 63.246 kb on + strand, within Atu5064 at 63.254 kb on - strand, within Atu5064 at 63.271 kb on - strand, within Atu5064 at 63.496 kb on - strand at 63.516 kb on + strand at 63.535 kb on - strand at 63.636 kb on + strand, within Atu5065
Per-strain Table
Position Strand Gene LocusTag Fraction Hydantoin (N) remove 60,853 + Atu5062 0.15 +0.7 60,854 + Atu5062 0.15 -0.5 60,878 - Atu5062 0.17 +1.0 60,889 + Atu5062 0.18 +0.5 60,897 - Atu5062 0.19 +1.6 60,960 + Atu5062 0.25 +0.8 61,068 + Atu5062 0.35 +0.4 61,104 + Atu5062 0.39 -0.8 61,111 + Atu5062 0.39 +2.9 61,116 + Atu5062 0.40 +2.9 61,124 - Atu5062 0.41 +0.3 61,156 + Atu5062 0.44 -0.1 61,164 - Atu5062 0.44 +1.6 61,164 - Atu5062 0.44 +1.5 61,221 - Atu5062 0.50 +0.7 61,226 + Atu5062 0.50 +0.7 61,258 + Atu5062 0.53 +0.4 61,266 - Atu5062 0.54 +0.7 61,266 - Atu5062 0.54 +1.2 61,266 - Atu5062 0.54 +0.7 61,266 - Atu5062 0.54 +0.3 61,271 - Atu5062 0.55 -0.4 61,304 - Atu5062 0.58 -0.2 61,318 + Atu5062 0.59 +0.6 61,441 + Atu5062 0.71 +0.3 61,456 + Atu5062 0.72 +0.4 61,459 - Atu5062 0.73 -0.9 61,474 - Atu5062 0.74 +0.3 61,485 - Atu5062 0.75 +1.8 61,523 + Atu5062 0.79 +1.4 61,523 + Atu5062 0.79 +2.6 61,531 - Atu5062 0.80 -0.3 61,565 + Atu5062 0.83 +0.6 61,565 + Atu5062 0.83 -1.1 61,573 - Atu5062 0.84 +0.0 61,573 - Atu5062 0.84 -0.8 61,573 - Atu5062 0.84 -0.9 61,786 + +0.7 61,814 - +0.0 61,873 - Atu5063 0.13 +1.9 61,873 - Atu5063 0.13 +0.7 61,916 + Atu5063 0.17 +2.3 61,916 + Atu5063 0.17 +4.2 61,922 + Atu5063 0.18 +0.9 61,930 - Atu5063 0.19 +1.0 61,961 - Atu5063 0.23 +2.4 61,999 - Atu5063 0.27 +1.2 62,057 - Atu5063 0.33 +0.1 62,093 + Atu5063 0.38 +0.3 62,093 + Atu5063 0.38 +1.1 62,093 + Atu5063 0.38 +3.0 62,093 + Atu5063 0.38 +0.0 62,093 + Atu5063 0.38 +0.6 62,101 - Atu5063 0.38 +2.6 62,126 + Atu5063 0.41 +0.2 62,126 + Atu5063 0.41 -0.5 62,136 + Atu5063 0.42 -0.3 62,172 + Atu5063 0.47 +1.1 62,225 + Atu5063 0.53 +1.9 62,391 + Atu5063 0.71 +0.2 62,459 + Atu5063 0.79 -0.7 62,493 + Atu5063 0.83 +0.6 62,511 + Atu5063 0.85 -1.3 62,546 + Atu5063 0.89 +0.7 62,625 + -0.2 62,625 + +1.1 62,663 - +0.9 62,666 - +1.1 62,699 + -0.1 62,718 - +0.0 62,733 - +0.5 62,745 + -0.1 62,754 - +0.4 62,768 + -0.8 62,776 - -0.1 62,789 + +2.2 62,789 + +0.7 62,789 + +0.7 62,826 - +1.1 62,843 + +1.0 62,848 - +0.5 62,967 + Atu5064 0.18 -0.5 62,967 + Atu5064 0.18 +1.6 63,039 - Atu5064 0.34 +1.2 63,068 - Atu5064 0.40 +1.6 63,211 - Atu5064 0.72 -0.5 63,211 - Atu5064 0.72 +0.6 63,216 - Atu5064 0.73 +0.6 63,216 - Atu5064 0.73 +0.7 63,244 - Atu5064 0.79 +0.6 63,244 - Atu5064 0.79 +2.6 63,244 - Atu5064 0.79 -1.4 63,244 - Atu5064 0.79 +0.0 63,244 - Atu5064 0.79 +1.6 63,246 + Atu5064 0.79 -0.5 63,254 - Atu5064 0.81 +0.9 63,271 - Atu5064 0.85 +2.0 63,496 - -0.5 63,516 + -0.1 63,535 - -1.8 63,636 + Atu5065 0.20 +2.0
Or see this region's nucleotide sequence