Experiment: deuterated glucose in H2O
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yibW and yibV are separated by 369 nucleotides yibV and yibU are separated by 164 nucleotides yibU and yibH are separated by 96 nucleotides
b4651: yibW - no description, at 3,766,915 to 3,766,998
yibW
b4615: yibV - hypothetical protein, no homologs (RefSeq), at 3,767,368 to 3,767,806
yibV
b4652: yibU - no description, at 3,767,971 to 3,768,169
yibU
b3597: yibH - hypothetical protein (NCBI), at 3,768,266 to 3,769,402
yibH
Position (kb)
3767
3768
3769 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3767.931 kb on - strand at 3767.931 kb on - strand at 3767.938 kb on - strand at 3768.008 kb on - strand, within yibU at 3768.008 kb on - strand, within yibU at 3768.010 kb on - strand, within yibU at 3768.019 kb on - strand, within yibU at 3768.055 kb on - strand, within yibU at 3768.055 kb on - strand, within yibU at 3768.055 kb on - strand, within yibU at 3768.064 kb on - strand, within yibU at 3768.065 kb on - strand, within yibU at 3768.070 kb on - strand, within yibU at 3768.070 kb on - strand, within yibU at 3768.075 kb on - strand, within yibU at 3768.097 kb on - strand, within yibU at 3768.098 kb on - strand, within yibU at 3768.099 kb on - strand, within yibU at 3768.099 kb on - strand, within yibU at 3768.099 kb on - strand, within yibU at 3768.099 kb on - strand, within yibU at 3768.099 kb on - strand, within yibU at 3768.099 kb on - strand, within yibU at 3768.104 kb on - strand, within yibU at 3768.110 kb on - strand, within yibU at 3768.110 kb on - strand, within yibU at 3768.120 kb on - strand, within yibU at 3768.146 kb on - strand, within yibU at 3768.227 kb on + strand at 3768.260 kb on - strand at 3768.269 kb on - strand at 3768.269 kb on - strand at 3768.270 kb on - strand at 3768.270 kb on - strand at 3768.302 kb on - strand at 3768.302 kb on - strand at 3768.316 kb on - strand at 3768.324 kb on - strand at 3768.333 kb on - strand at 3768.334 kb on - strand at 3768.344 kb on - strand at 3768.345 kb on - strand at 3768.345 kb on - strand at 3768.351 kb on + strand at 3768.400 kb on - strand, within yibH at 3768.410 kb on + strand, within yibH at 3768.435 kb on - strand, within yibH at 3768.435 kb on - strand, within yibH at 3768.436 kb on + strand, within yibH at 3768.437 kb on + strand, within yibH at 3768.464 kb on - strand, within yibH at 3768.466 kb on + strand, within yibH at 3768.492 kb on - strand, within yibH at 3768.502 kb on - strand, within yibH at 3768.516 kb on - strand, within yibH at 3768.516 kb on - strand, within yibH at 3768.540 kb on + strand, within yibH at 3768.540 kb on + strand, within yibH at 3768.540 kb on + strand, within yibH at 3768.679 kb on + strand, within yibH at 3768.698 kb on + strand, within yibH at 3768.706 kb on - strand, within yibH at 3768.709 kb on + strand, within yibH at 3768.763 kb on - strand, within yibH at 3768.763 kb on - strand, within yibH at 3768.781 kb on + strand, within yibH at 3768.789 kb on - strand, within yibH at 3768.834 kb on + strand, within yibH at 3768.965 kb on - strand, within yibH at 3768.965 kb on - strand, within yibH at 3768.996 kb on + strand, within yibH at 3768.996 kb on + strand, within yibH at 3769.004 kb on - strand, within yibH at 3769.004 kb on - strand, within yibH at 3769.004 kb on - strand, within yibH at 3769.009 kb on - strand, within yibH at 3769.011 kb on + strand, within yibH at 3769.011 kb on + strand, within yibH at 3769.011 kb on + strand, within yibH at 3769.017 kb on + strand, within yibH at 3769.041 kb on - strand, within yibH at 3769.081 kb on + strand, within yibH at 3769.088 kb on - strand, within yibH at 3769.114 kb on - strand, within yibH
Per-strain Table
Position Strand Gene LocusTag Fraction deuterated glucose in H2O remove 3,767,931 - +1.1 3,767,931 - +0.3 3,767,938 - -0.5 3,768,008 - yibU b4652 0.19 -0.1 3,768,008 - yibU b4652 0.19 +1.4 3,768,010 - yibU b4652 0.20 +0.5 3,768,019 - yibU b4652 0.24 +0.1 3,768,055 - yibU b4652 0.42 -0.3 3,768,055 - yibU b4652 0.42 +0.7 3,768,055 - yibU b4652 0.42 +1.4 3,768,064 - yibU b4652 0.47 +0.8 3,768,065 - yibU b4652 0.47 -0.1 3,768,070 - yibU b4652 0.50 +0.4 3,768,070 - yibU b4652 0.50 +0.9 3,768,075 - yibU b4652 0.52 -1.1 3,768,097 - yibU b4652 0.63 -1.1 3,768,098 - yibU b4652 0.64 +0.3 3,768,099 - yibU b4652 0.64 +0.3 3,768,099 - yibU b4652 0.64 -0.1 3,768,099 - yibU b4652 0.64 -0.3 3,768,099 - yibU b4652 0.64 +0.0 3,768,099 - yibU b4652 0.64 +1.2 3,768,099 - yibU b4652 0.64 +1.2 3,768,104 - yibU b4652 0.67 -1.4 3,768,110 - yibU b4652 0.70 +3.1 3,768,110 - yibU b4652 0.70 +0.2 3,768,120 - yibU b4652 0.75 +0.1 3,768,146 - yibU b4652 0.88 -0.2 3,768,227 + -0.3 3,768,260 - +0.6 3,768,269 - +2.2 3,768,269 - +1.1 3,768,270 - -1.1 3,768,270 - +2.2 3,768,302 - +0.0 3,768,302 - -0.1 3,768,316 - -0.1 3,768,324 - +0.5 3,768,333 - -1.1 3,768,334 - +0.1 3,768,344 - +1.8 3,768,345 - +0.4 3,768,345 - +1.2 3,768,351 + -0.9 3,768,400 - yibH b3597 0.12 +0.9 3,768,410 + yibH b3597 0.13 +0.2 3,768,435 - yibH b3597 0.15 +0.3 3,768,435 - yibH b3597 0.15 +0.8 3,768,436 + yibH b3597 0.15 +0.9 3,768,437 + yibH b3597 0.15 -0.5 3,768,464 - yibH b3597 0.17 -0.2 3,768,466 + yibH b3597 0.18 -1.2 3,768,492 - yibH b3597 0.20 -0.4 3,768,502 - yibH b3597 0.21 +0.1 3,768,516 - yibH b3597 0.22 +0.3 3,768,516 - yibH b3597 0.22 -0.1 3,768,540 + yibH b3597 0.24 +1.7 3,768,540 + yibH b3597 0.24 +0.3 3,768,540 + yibH b3597 0.24 -1.2 3,768,679 + yibH b3597 0.36 +0.4 3,768,698 + yibH b3597 0.38 +0.7 3,768,706 - yibH b3597 0.39 -0.8 3,768,709 + yibH b3597 0.39 -0.5 3,768,763 - yibH b3597 0.44 +0.5 3,768,763 - yibH b3597 0.44 -2.6 3,768,781 + yibH b3597 0.45 -1.5 3,768,789 - yibH b3597 0.46 +2.0 3,768,834 + yibH b3597 0.50 +0.5 3,768,965 - yibH b3597 0.61 -0.3 3,768,965 - yibH b3597 0.61 -0.3 3,768,996 + yibH b3597 0.64 +1.4 3,768,996 + yibH b3597 0.64 +0.9 3,769,004 - yibH b3597 0.65 -0.3 3,769,004 - yibH b3597 0.65 +0.9 3,769,004 - yibH b3597 0.65 -0.0 3,769,009 - yibH b3597 0.65 -0.1 3,769,011 + yibH b3597 0.66 +0.7 3,769,011 + yibH b3597 0.66 +0.2 3,769,011 + yibH b3597 0.66 +0.1 3,769,017 + yibH b3597 0.66 +0.8 3,769,041 - yibH b3597 0.68 -1.0 3,769,081 + yibH b3597 0.72 -0.0 3,769,088 - yibH b3597 0.72 +0.3 3,769,114 - yibH b3597 0.75 +0.8
Or see this region's nucleotide sequence