Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4125 and Echvi_4126 are separated by 93 nucleotides Echvi_4126 and Echvi_4127 are separated by 41 nucleotides Echvi_4127 and Echvi_4128 are separated by 4 nucleotides
Echvi_4125: Echvi_4125 - copper-(or silver)-translocating P-type ATPase, at 4,938,444 to 4,940,681
_4125
Echvi_4126: Echvi_4126 - AraC-type DNA-binding domain-containing proteins, at 4,940,775 to 4,941,344
_4126
Echvi_4127: Echvi_4127 - copper-(or silver)-translocating P-type ATPase, at 4,941,386 to 4,943,425
_4127
Echvi_4128: Echvi_4128 - Predicted permeases, at 4,943,430 to 4,944,650
_4128
Position (kb)
4941
4942
4943
4944 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4940.453 kb on + strand, within Echvi_4125 at 4940.454 kb on - strand, within Echvi_4125 at 4940.462 kb on - strand at 4940.501 kb on + strand at 4940.520 kb on + strand at 4940.521 kb on - strand at 4940.580 kb on + strand at 4940.650 kb on - strand at 4940.703 kb on + strand at 4940.828 kb on + strand at 4940.866 kb on - strand, within Echvi_4126 at 4940.870 kb on - strand at 4940.870 kb on - strand, within Echvi_4126 at 4940.877 kb on - strand, within Echvi_4126 at 4940.884 kb on + strand, within Echvi_4126 at 4940.885 kb on - strand, within Echvi_4126 at 4940.927 kb on - strand, within Echvi_4126 at 4940.969 kb on + strand, within Echvi_4126 at 4941.025 kb on + strand, within Echvi_4126 at 4941.037 kb on - strand, within Echvi_4126 at 4941.037 kb on - strand, within Echvi_4126 at 4941.042 kb on - strand, within Echvi_4126 at 4941.042 kb on - strand, within Echvi_4126 at 4941.086 kb on + strand, within Echvi_4126 at 4941.191 kb on + strand, within Echvi_4126 at 4941.191 kb on + strand, within Echvi_4126 at 4941.192 kb on - strand, within Echvi_4126 at 4941.192 kb on - strand, within Echvi_4126 at 4941.229 kb on - strand, within Echvi_4126 at 4941.237 kb on + strand, within Echvi_4126 at 4941.237 kb on + strand, within Echvi_4126 at 4941.238 kb on - strand, within Echvi_4126 at 4941.243 kb on + strand, within Echvi_4126 at 4941.243 kb on + strand, within Echvi_4126 at 4941.244 kb on - strand, within Echvi_4126 at 4941.296 kb on + strand at 4941.320 kb on + strand at 4941.321 kb on - strand at 4941.324 kb on - strand at 4941.333 kb on + strand at 4941.334 kb on - strand at 4941.334 kb on - strand at 4941.334 kb on - strand at 4941.334 kb on - strand at 4941.338 kb on + strand at 4941.338 kb on + strand at 4941.338 kb on + strand at 4941.360 kb on + strand at 4941.361 kb on - strand at 4941.367 kb on + strand at 4941.367 kb on + strand at 4941.367 kb on + strand at 4941.367 kb on + strand at 4941.368 kb on - strand at 4941.368 kb on - strand at 4941.368 kb on - strand at 4941.368 kb on - strand at 4941.370 kb on + strand at 4941.370 kb on + strand at 4941.371 kb on - strand at 4941.371 kb on - strand at 4941.371 kb on - strand at 4941.371 kb on - strand at 4941.371 kb on - strand at 4941.378 kb on - strand at 4941.379 kb on + strand at 4941.379 kb on + strand at 4941.380 kb on - strand at 4941.387 kb on + strand at 4941.391 kb on + strand at 4941.391 kb on + strand at 4941.391 kb on + strand at 4941.440 kb on - strand at 4941.440 kb on - strand at 4941.461 kb on + strand at 4941.461 kb on + strand at 4941.462 kb on - strand at 4941.473 kb on + strand at 4941.532 kb on - strand at 4941.532 kb on - strand at 4941.532 kb on - strand at 4941.547 kb on + strand at 4941.547 kb on + strand at 4941.547 kb on + strand at 4941.547 kb on + strand at 4941.548 kb on - strand at 4941.548 kb on - strand at 4941.548 kb on - strand at 4941.566 kb on - strand at 4941.568 kb on + strand at 4941.570 kb on + strand at 4941.570 kb on + strand at 4941.571 kb on - strand at 4941.632 kb on - strand, within Echvi_4127 at 4941.632 kb on - strand, within Echvi_4127 at 4941.654 kb on - strand, within Echvi_4127 at 4941.717 kb on - strand, within Echvi_4127 at 4941.737 kb on + strand, within Echvi_4127 at 4941.737 kb on + strand, within Echvi_4127 at 4941.741 kb on + strand, within Echvi_4127 at 4941.741 kb on + strand, within Echvi_4127 at 4941.742 kb on - strand, within Echvi_4127 at 4941.758 kb on + strand, within Echvi_4127 at 4941.758 kb on + strand, within Echvi_4127 at 4941.758 kb on + strand, within Echvi_4127 at 4941.759 kb on - strand, within Echvi_4127 at 4941.759 kb on - strand, within Echvi_4127 at 4941.759 kb on - strand, within Echvi_4127 at 4941.769 kb on + strand, within Echvi_4127 at 4941.770 kb on - strand, within Echvi_4127 at 4941.875 kb on + strand, within Echvi_4127 at 4941.875 kb on + strand, within Echvi_4127 at 4941.916 kb on + strand, within Echvi_4127 at 4941.929 kb on - strand, within Echvi_4127 at 4941.983 kb on + strand, within Echvi_4127 at 4941.983 kb on + strand, within Echvi_4127 at 4941.984 kb on - strand, within Echvi_4127 at 4941.984 kb on - strand, within Echvi_4127 at 4942.010 kb on - strand, within Echvi_4127 at 4942.069 kb on - strand, within Echvi_4127 at 4942.172 kb on - strand, within Echvi_4127 at 4942.223 kb on + strand, within Echvi_4127 at 4942.248 kb on + strand, within Echvi_4127 at 4942.280 kb on - strand, within Echvi_4127 at 4942.311 kb on - strand, within Echvi_4127 at 4942.413 kb on - strand, within Echvi_4127 at 4942.413 kb on - strand, within Echvi_4127 at 4942.535 kb on + strand, within Echvi_4127 at 4942.536 kb on - strand, within Echvi_4127 at 4942.545 kb on + strand, within Echvi_4127 at 4942.567 kb on + strand, within Echvi_4127 at 4942.567 kb on + strand, within Echvi_4127 at 4942.639 kb on - strand, within Echvi_4127 at 4942.639 kb on - strand, within Echvi_4127 at 4942.829 kb on + strand, within Echvi_4127 at 4942.829 kb on + strand, within Echvi_4127 at 4942.830 kb on - strand, within Echvi_4127 at 4942.834 kb on + strand, within Echvi_4127 at 4942.835 kb on - strand, within Echvi_4127 at 4942.835 kb on - strand, within Echvi_4127 at 4942.984 kb on + strand, within Echvi_4127 at 4942.984 kb on + strand, within Echvi_4127 at 4942.985 kb on - strand, within Echvi_4127 at 4942.985 kb on - strand, within Echvi_4127 at 4942.985 kb on - strand, within Echvi_4127 at 4942.985 kb on - strand, within Echvi_4127 at 4942.985 kb on - strand, within Echvi_4127 at 4943.029 kb on + strand, within Echvi_4127 at 4943.039 kb on + strand, within Echvi_4127 at 4943.040 kb on - strand, within Echvi_4127 at 4943.040 kb on - strand, within Echvi_4127 at 4943.040 kb on - strand, within Echvi_4127 at 4943.051 kb on - strand, within Echvi_4127 at 4943.055 kb on + strand, within Echvi_4127 at 4943.056 kb on - strand, within Echvi_4127 at 4943.189 kb on + strand, within Echvi_4127 at 4943.190 kb on - strand, within Echvi_4127 at 4943.299 kb on + strand at 4943.309 kb on + strand at 4943.310 kb on - strand at 4943.310 kb on - strand at 4943.320 kb on + strand at 4943.321 kb on - strand at 4943.321 kb on - strand at 4943.321 kb on - strand at 4943.321 kb on - strand at 4943.401 kb on + strand at 4943.401 kb on + strand at 4943.402 kb on - strand at 4943.431 kb on + strand at 4943.432 kb on - strand at 4943.436 kb on + strand at 4943.436 kb on + strand at 4943.437 kb on - strand at 4943.440 kb on - strand at 4943.549 kb on + strand at 4943.549 kb on + strand at 4943.550 kb on - strand at 4943.566 kb on + strand, within Echvi_4128 at 4943.599 kb on - strand, within Echvi_4128 at 4943.600 kb on + strand, within Echvi_4128 at 4943.630 kb on - strand, within Echvi_4128 at 4943.640 kb on - strand, within Echvi_4128 at 4943.708 kb on - strand, within Echvi_4128 at 4943.718 kb on + strand, within Echvi_4128 at 4943.732 kb on + strand, within Echvi_4128 at 4943.741 kb on + strand, within Echvi_4128 at 4943.741 kb on + strand, within Echvi_4128 at 4943.748 kb on + strand, within Echvi_4128 at 4943.748 kb on + strand, within Echvi_4128 at 4943.782 kb on + strand, within Echvi_4128 at 4943.785 kb on + strand, within Echvi_4128 at 4943.786 kb on - strand, within Echvi_4128 at 4943.786 kb on - strand, within Echvi_4128 at 4943.860 kb on - strand, within Echvi_4128 at 4943.910 kb on + strand, within Echvi_4128 at 4943.913 kb on - strand, within Echvi_4128 at 4943.920 kb on - strand, within Echvi_4128 at 4943.932 kb on - strand, within Echvi_4128 at 4943.996 kb on + strand, within Echvi_4128 at 4943.996 kb on + strand, within Echvi_4128 at 4943.999 kb on + strand, within Echvi_4128 at 4943.999 kb on + strand, within Echvi_4128 at 4944.000 kb on - strand, within Echvi_4128 at 4944.084 kb on + strand, within Echvi_4128 at 4944.084 kb on + strand, within Echvi_4128 at 4944.084 kb on + strand, within Echvi_4128 at 4944.106 kb on + strand, within Echvi_4128 at 4944.107 kb on - strand, within Echvi_4128 at 4944.107 kb on - strand, within Echvi_4128 at 4944.220 kb on - strand, within Echvi_4128 at 4944.287 kb on - strand, within Echvi_4128 at 4944.287 kb on - strand, within Echvi_4128 at 4944.297 kb on + strand, within Echvi_4128 at 4944.377 kb on + strand, within Echvi_4128 at 4944.378 kb on - strand, within Echvi_4128
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 4,940,453 + Echvi_4125 0.90 +1.1 4,940,454 - Echvi_4125 0.90 -1.0 4,940,462 - -0.5 4,940,501 + +0.2 4,940,520 + -0.2 4,940,521 - -2.1 4,940,580 + -1.2 4,940,650 - +1.5 4,940,703 + -0.1 4,940,828 + -1.0 4,940,866 - Echvi_4126 0.16 +1.4 4,940,870 - +1.8 4,940,870 - Echvi_4126 0.17 +0.0 4,940,877 - Echvi_4126 0.18 +1.5 4,940,884 + Echvi_4126 0.19 +0.3 4,940,885 - Echvi_4126 0.19 +0.1 4,940,927 - Echvi_4126 0.27 +0.8 4,940,969 + Echvi_4126 0.34 -1.0 4,941,025 + Echvi_4126 0.44 -0.7 4,941,037 - Echvi_4126 0.46 +0.0 4,941,037 - Echvi_4126 0.46 +0.6 4,941,042 - Echvi_4126 0.47 -0.6 4,941,042 - Echvi_4126 0.47 +0.1 4,941,086 + Echvi_4126 0.55 -0.2 4,941,191 + Echvi_4126 0.73 +0.3 4,941,191 + Echvi_4126 0.73 +0.1 4,941,192 - Echvi_4126 0.73 +1.0 4,941,192 - Echvi_4126 0.73 +0.6 4,941,229 - Echvi_4126 0.80 +0.2 4,941,237 + Echvi_4126 0.81 -0.8 4,941,237 + Echvi_4126 0.81 -0.4 4,941,238 - Echvi_4126 0.81 +0.4 4,941,243 + Echvi_4126 0.82 -0.3 4,941,243 + Echvi_4126 0.82 +1.1 4,941,244 - Echvi_4126 0.82 -0.0 4,941,296 + +2.0 4,941,320 + +0.6 4,941,321 - -3.2 4,941,324 - +0.6 4,941,333 + +0.3 4,941,334 - -1.4 4,941,334 - +1.3 4,941,334 - +0.6 4,941,334 - +0.2 4,941,338 + -0.7 4,941,338 + +1.2 4,941,338 + -0.9 4,941,360 + -0.7 4,941,361 - -0.9 4,941,367 + -0.3 4,941,367 + +0.0 4,941,367 + +1.3 4,941,367 + -0.2 4,941,368 - +0.1 4,941,368 - -1.0 4,941,368 - +1.8 4,941,368 - -0.7 4,941,370 + +0.4 4,941,370 + +0.4 4,941,371 - +0.3 4,941,371 - -0.9 4,941,371 - -0.5 4,941,371 - +0.5 4,941,371 - +1.2 4,941,378 - -0.0 4,941,379 + +0.7 4,941,379 + +0.1 4,941,380 - -1.0 4,941,387 + -2.4 4,941,391 + -0.1 4,941,391 + +1.0 4,941,391 + -2.5 4,941,440 - -0.6 4,941,440 - -0.6 4,941,461 + +0.5 4,941,461 + +1.1 4,941,462 - -0.0 4,941,473 + +0.9 4,941,532 - -0.4 4,941,532 - -1.0 4,941,532 - +0.3 4,941,547 + +1.8 4,941,547 + -0.2 4,941,547 + +0.0 4,941,547 + -0.4 4,941,548 - -1.3 4,941,548 - -3.6 4,941,548 - -0.2 4,941,566 - +0.3 4,941,568 + -1.5 4,941,570 + -1.1 4,941,570 + -0.1 4,941,571 - +0.2 4,941,632 - Echvi_4127 0.12 -0.2 4,941,632 - Echvi_4127 0.12 -0.3 4,941,654 - Echvi_4127 0.13 -0.7 4,941,717 - Echvi_4127 0.16 +0.2 4,941,737 + Echvi_4127 0.17 -1.4 4,941,737 + Echvi_4127 0.17 -1.2 4,941,741 + Echvi_4127 0.17 -0.6 4,941,741 + Echvi_4127 0.17 +1.7 4,941,742 - Echvi_4127 0.17 +1.3 4,941,758 + Echvi_4127 0.18 -0.5 4,941,758 + Echvi_4127 0.18 -0.1 4,941,758 + Echvi_4127 0.18 -0.0 4,941,759 - Echvi_4127 0.18 -1.0 4,941,759 - Echvi_4127 0.18 +0.7 4,941,759 - Echvi_4127 0.18 -0.6 4,941,769 + Echvi_4127 0.19 -0.3 4,941,770 - Echvi_4127 0.19 +0.3 4,941,875 + Echvi_4127 0.24 +1.4 4,941,875 + Echvi_4127 0.24 +0.2 4,941,916 + Echvi_4127 0.26 -0.2 4,941,929 - Echvi_4127 0.27 -2.0 4,941,983 + Echvi_4127 0.29 -0.0 4,941,983 + Echvi_4127 0.29 -1.0 4,941,984 - Echvi_4127 0.29 -0.4 4,941,984 - Echvi_4127 0.29 -1.6 4,942,010 - Echvi_4127 0.31 +0.1 4,942,069 - Echvi_4127 0.33 -1.4 4,942,172 - Echvi_4127 0.39 -2.2 4,942,223 + Echvi_4127 0.41 -1.4 4,942,248 + Echvi_4127 0.42 -0.2 4,942,280 - Echvi_4127 0.44 +0.8 4,942,311 - Echvi_4127 0.45 -0.1 4,942,413 - Echvi_4127 0.50 -0.7 4,942,413 - Echvi_4127 0.50 -0.0 4,942,535 + Echvi_4127 0.56 -0.2 4,942,536 - Echvi_4127 0.56 -0.7 4,942,545 + Echvi_4127 0.57 -1.2 4,942,567 + Echvi_4127 0.58 +0.5 4,942,567 + Echvi_4127 0.58 -0.9 4,942,639 - Echvi_4127 0.61 +0.5 4,942,639 - Echvi_4127 0.61 -0.5 4,942,829 + Echvi_4127 0.71 -1.3 4,942,829 + Echvi_4127 0.71 +0.4 4,942,830 - Echvi_4127 0.71 +0.0 4,942,834 + Echvi_4127 0.71 -0.9 4,942,835 - Echvi_4127 0.71 -1.6 4,942,835 - Echvi_4127 0.71 -0.4 4,942,984 + Echvi_4127 0.78 +1.5 4,942,984 + Echvi_4127 0.78 +0.3 4,942,985 - Echvi_4127 0.78 -1.9 4,942,985 - Echvi_4127 0.78 -1.7 4,942,985 - Echvi_4127 0.78 -0.5 4,942,985 - Echvi_4127 0.78 -1.9 4,942,985 - Echvi_4127 0.78 -1.3 4,943,029 + Echvi_4127 0.81 +0.8 4,943,039 + Echvi_4127 0.81 -0.3 4,943,040 - Echvi_4127 0.81 -0.1 4,943,040 - Echvi_4127 0.81 +0.5 4,943,040 - Echvi_4127 0.81 +0.4 4,943,051 - Echvi_4127 0.82 +0.3 4,943,055 + Echvi_4127 0.82 +1.2 4,943,056 - Echvi_4127 0.82 +0.0 4,943,189 + Echvi_4127 0.88 +0.3 4,943,190 - Echvi_4127 0.88 -0.1 4,943,299 + -0.5 4,943,309 + +2.2 4,943,310 - +0.3 4,943,310 - -0.2 4,943,320 + -0.5 4,943,321 - +0.1 4,943,321 - +0.4 4,943,321 - -0.2 4,943,321 - +1.1 4,943,401 + -1.2 4,943,401 + -0.4 4,943,402 - -0.8 4,943,431 + -1.1 4,943,432 - +0.1 4,943,436 + -2.2 4,943,436 + -2.1 4,943,437 - -0.9 4,943,440 - -0.3 4,943,549 + +0.4 4,943,549 + -0.9 4,943,550 - +0.2 4,943,566 + Echvi_4128 0.11 +0.8 4,943,599 - Echvi_4128 0.14 +2.2 4,943,600 + Echvi_4128 0.14 -0.5 4,943,630 - Echvi_4128 0.16 -0.2 4,943,640 - Echvi_4128 0.17 -0.2 4,943,708 - Echvi_4128 0.23 +1.1 4,943,718 + Echvi_4128 0.24 -1.5 4,943,732 + Echvi_4128 0.25 -0.4 4,943,741 + Echvi_4128 0.25 +1.3 4,943,741 + Echvi_4128 0.25 -0.1 4,943,748 + Echvi_4128 0.26 -2.3 4,943,748 + Echvi_4128 0.26 -0.4 4,943,782 + Echvi_4128 0.29 +1.6 4,943,785 + Echvi_4128 0.29 +1.0 4,943,786 - Echvi_4128 0.29 -0.0 4,943,786 - Echvi_4128 0.29 -0.2 4,943,860 - Echvi_4128 0.35 +1.5 4,943,910 + Echvi_4128 0.39 +0.2 4,943,913 - Echvi_4128 0.40 +1.1 4,943,920 - Echvi_4128 0.40 -0.6 4,943,932 - Echvi_4128 0.41 -0.4 4,943,996 + Echvi_4128 0.46 -0.1 4,943,996 + Echvi_4128 0.46 -0.0 4,943,999 + Echvi_4128 0.47 -2.0 4,943,999 + Echvi_4128 0.47 +0.3 4,944,000 - Echvi_4128 0.47 +0.3 4,944,084 + Echvi_4128 0.54 -0.4 4,944,084 + Echvi_4128 0.54 +0.3 4,944,084 + Echvi_4128 0.54 -0.7 4,944,106 + Echvi_4128 0.55 +0.5 4,944,107 - Echvi_4128 0.55 -0.3 4,944,107 - Echvi_4128 0.55 -0.0 4,944,220 - Echvi_4128 0.65 -0.6 4,944,287 - Echvi_4128 0.70 +0.5 4,944,287 - Echvi_4128 0.70 +0.6 4,944,297 + Echvi_4128 0.71 -0.7 4,944,377 + Echvi_4128 0.78 +1.3 4,944,378 - Echvi_4128 0.78 -0.7
Or see this region's nucleotide sequence