Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2610

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2609 and Echvi_2610 are separated by 117 nucleotidesEchvi_2610 and Echvi_2611 are separated by 94 nucleotides Echvi_2609: Echvi_2609 - Predicted xylanase/chitin deacetylase, at 3,091,072 to 3,092,064 _2609 Echvi_2610: Echvi_2610 - Esterase/lipase, at 3,092,182 to 3,093,003 _2610 Echvi_2611: Echvi_2611 - hypothetical protein, at 3,093,098 to 3,093,997 _2611 Position (kb) 3092 3093 3094Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3091.217 kb on + strand, within Echvi_2609at 3091.274 kb on + strand, within Echvi_2609at 3091.274 kb on + strand, within Echvi_2609at 3091.275 kb on - strand, within Echvi_2609at 3091.306 kb on + strand, within Echvi_2609at 3091.308 kb on + strand, within Echvi_2609at 3091.378 kb on + strand, within Echvi_2609at 3091.468 kb on + strand, within Echvi_2609at 3091.471 kb on + strand, within Echvi_2609at 3091.471 kb on + strand, within Echvi_2609at 3091.471 kb on + strand, within Echvi_2609at 3091.472 kb on - strand, within Echvi_2609at 3091.472 kb on - strand, within Echvi_2609at 3091.539 kb on - strand, within Echvi_2609at 3091.636 kb on - strand, within Echvi_2609at 3091.646 kb on + strand, within Echvi_2609at 3091.997 kb on + strandat 3092.024 kb on + strandat 3092.029 kb on - strandat 3092.108 kb on + strandat 3092.161 kb on + strandat 3092.251 kb on + strandat 3092.275 kb on + strand, within Echvi_2610at 3092.276 kb on - strand, within Echvi_2610at 3092.276 kb on - strand, within Echvi_2610at 3092.278 kb on + strand, within Echvi_2610at 3092.279 kb on - strand, within Echvi_2610at 3092.308 kb on + strand, within Echvi_2610at 3092.308 kb on + strand, within Echvi_2610at 3092.309 kb on - strand, within Echvi_2610at 3092.309 kb on - strand, within Echvi_2610at 3092.338 kb on + strand, within Echvi_2610at 3092.339 kb on - strand, within Echvi_2610at 3092.339 kb on - strand, within Echvi_2610at 3092.341 kb on + strand, within Echvi_2610at 3092.460 kb on - strand, within Echvi_2610at 3092.466 kb on + strand, within Echvi_2610at 3092.497 kb on + strand, within Echvi_2610at 3092.497 kb on + strand, within Echvi_2610at 3092.497 kb on + strand, within Echvi_2610at 3092.497 kb on + strand, within Echvi_2610at 3092.522 kb on + strand, within Echvi_2610at 3092.523 kb on - strand, within Echvi_2610at 3092.541 kb on + strand, within Echvi_2610at 3092.542 kb on - strand, within Echvi_2610at 3092.542 kb on - strand, within Echvi_2610at 3092.552 kb on - strand, within Echvi_2610at 3092.697 kb on + strand, within Echvi_2610at 3092.697 kb on + strand, within Echvi_2610at 3092.697 kb on + strand, within Echvi_2610at 3092.775 kb on - strand, within Echvi_2610at 3092.776 kb on + strand, within Echvi_2610at 3092.776 kb on + strand, within Echvi_2610at 3092.776 kb on + strand, within Echvi_2610at 3092.777 kb on - strand, within Echvi_2610at 3092.848 kb on + strand, within Echvi_2610at 3092.848 kb on + strand, within Echvi_2610at 3092.849 kb on - strand, within Echvi_2610at 3092.863 kb on + strand, within Echvi_2610at 3092.864 kb on - strand, within Echvi_2610at 3092.865 kb on + strand, within Echvi_2610at 3092.865 kb on + strand, within Echvi_2610at 3092.866 kb on - strand, within Echvi_2610at 3092.866 kb on - strand, within Echvi_2610at 3092.866 kb on - strand, within Echvi_2610at 3092.910 kb on - strand, within Echvi_2610at 3092.910 kb on - strand, within Echvi_2610at 3092.910 kb on - strand, within Echvi_2610at 3092.911 kb on + strand, within Echvi_2610at 3092.912 kb on - strand, within Echvi_2610at 3092.912 kb on - strand, within Echvi_2610at 3092.935 kb on - strandat 3092.944 kb on + strandat 3092.944 kb on + strandat 3092.944 kb on + strandat 3092.994 kb on - strandat 3093.010 kb on - strandat 3093.064 kb on + strandat 3093.065 kb on - strandat 3093.067 kb on + strandat 3093.067 kb on + strandat 3093.068 kb on - strandat 3093.069 kb on + strandat 3093.070 kb on - strandat 3093.092 kb on + strandat 3093.120 kb on + strandat 3093.121 kb on - strandat 3093.121 kb on - strandat 3093.122 kb on + strandat 3093.123 kb on - strandat 3093.212 kb on - strand, within Echvi_2611at 3093.295 kb on + strand, within Echvi_2611at 3093.332 kb on - strand, within Echvi_2611at 3093.333 kb on + strand, within Echvi_2611at 3093.333 kb on + strand, within Echvi_2611at 3093.334 kb on - strand, within Echvi_2611at 3093.334 kb on - strand, within Echvi_2611at 3093.453 kb on + strand, within Echvi_2611at 3093.453 kb on + strand, within Echvi_2611at 3093.454 kb on - strand, within Echvi_2611at 3093.693 kb on - strand, within Echvi_2611at 3093.693 kb on - strand, within Echvi_2611at 3093.719 kb on + strand, within Echvi_2611at 3093.720 kb on - strand, within Echvi_2611at 3093.760 kb on + strand, within Echvi_2611at 3093.761 kb on - strand, within Echvi_2611at 3093.825 kb on - strand, within Echvi_2611at 3093.862 kb on - strand, within Echvi_2611at 3093.880 kb on + strand, within Echvi_2611at 3093.893 kb on + strand, within Echvi_2611at 3093.893 kb on + strand, within Echvi_2611at 3093.893 kb on + strand, within Echvi_2611at 3093.898 kb on + strand, within Echvi_2611at 3093.899 kb on - strand, within Echvi_2611at 3093.983 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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3,091,217 + Echvi_2609 0.15 -0.5
3,091,274 + Echvi_2609 0.20 -0.5
3,091,274 + Echvi_2609 0.20 -1.9
3,091,275 - Echvi_2609 0.20 -0.3
3,091,306 + Echvi_2609 0.24 -1.2
3,091,308 + Echvi_2609 0.24 +0.1
3,091,378 + Echvi_2609 0.31 +1.5
3,091,468 + Echvi_2609 0.40 -0.5
3,091,471 + Echvi_2609 0.40 +0.7
3,091,471 + Echvi_2609 0.40 +0.5
3,091,471 + Echvi_2609 0.40 +0.7
3,091,472 - Echvi_2609 0.40 -0.9
3,091,472 - Echvi_2609 0.40 +0.3
3,091,539 - Echvi_2609 0.47 -0.1
3,091,636 - Echvi_2609 0.57 -0.1
3,091,646 + Echvi_2609 0.58 -0.2
3,091,997 + +0.2
3,092,024 + -0.1
3,092,029 - -1.0
3,092,108 + -0.0
3,092,161 + +1.6
3,092,251 + +1.3
3,092,275 + Echvi_2610 0.11 +0.6
3,092,276 - Echvi_2610 0.11 +0.9
3,092,276 - Echvi_2610 0.11 +0.6
3,092,278 + Echvi_2610 0.12 -2.7
3,092,279 - Echvi_2610 0.12 -0.7
3,092,308 + Echvi_2610 0.15 -1.2
3,092,308 + Echvi_2610 0.15 +0.8
3,092,309 - Echvi_2610 0.15 -1.1
3,092,309 - Echvi_2610 0.15 +0.1
3,092,338 + Echvi_2610 0.19 +0.6
3,092,339 - Echvi_2610 0.19 -1.8
3,092,339 - Echvi_2610 0.19 -0.2
3,092,341 + Echvi_2610 0.19 -1.5
3,092,460 - Echvi_2610 0.34 -1.0
3,092,466 + Echvi_2610 0.35 -0.3
3,092,497 + Echvi_2610 0.38 -2.1
3,092,497 + Echvi_2610 0.38 -0.2
3,092,497 + Echvi_2610 0.38 -0.7
3,092,497 + Echvi_2610 0.38 -0.1
3,092,522 + Echvi_2610 0.41 -2.1
3,092,523 - Echvi_2610 0.41 +2.1
3,092,541 + Echvi_2610 0.44 +0.2
3,092,542 - Echvi_2610 0.44 +1.2
3,092,542 - Echvi_2610 0.44 -1.2
3,092,552 - Echvi_2610 0.45 +2.8
3,092,697 + Echvi_2610 0.63 -1.1
3,092,697 + Echvi_2610 0.63 -0.9
3,092,697 + Echvi_2610 0.63 -0.7
3,092,775 - Echvi_2610 0.72 -1.7
3,092,776 + Echvi_2610 0.72 -0.9
3,092,776 + Echvi_2610 0.72 +1.8
3,092,776 + Echvi_2610 0.72 +1.7
3,092,777 - Echvi_2610 0.72 +0.2
3,092,848 + Echvi_2610 0.81 -0.8
3,092,848 + Echvi_2610 0.81 +1.0
3,092,849 - Echvi_2610 0.81 -2.9
3,092,863 + Echvi_2610 0.83 +3.7
3,092,864 - Echvi_2610 0.83 -0.5
3,092,865 + Echvi_2610 0.83 -0.5
3,092,865 + Echvi_2610 0.83 -0.1
3,092,866 - Echvi_2610 0.83 +1.0
3,092,866 - Echvi_2610 0.83 +1.1
3,092,866 - Echvi_2610 0.83 -0.0
3,092,910 - Echvi_2610 0.89 +1.9
3,092,910 - Echvi_2610 0.89 +0.9
3,092,910 - Echvi_2610 0.89 +1.2
3,092,911 + Echvi_2610 0.89 +0.4
3,092,912 - Echvi_2610 0.89 -0.5
3,092,912 - Echvi_2610 0.89 +1.5
3,092,935 - -0.1
3,092,944 + -0.9
3,092,944 + -0.9
3,092,944 + +0.3
3,092,994 - +2.9
3,093,010 - -1.2
3,093,064 + -0.4
3,093,065 - -0.7
3,093,067 + -0.4
3,093,067 + +0.5
3,093,068 - -0.0
3,093,069 + -0.4
3,093,070 - -0.1
3,093,092 + -1.7
3,093,120 + +1.2
3,093,121 - +0.0
3,093,121 - +1.1
3,093,122 + -0.6
3,093,123 - -0.4
3,093,212 - Echvi_2611 0.13 +0.2
3,093,295 + Echvi_2611 0.22 -0.2
3,093,332 - Echvi_2611 0.26 +0.2
3,093,333 + Echvi_2611 0.26 -1.5
3,093,333 + Echvi_2611 0.26 -2.0
3,093,334 - Echvi_2611 0.26 -2.0
3,093,334 - Echvi_2611 0.26 +0.6
3,093,453 + Echvi_2611 0.39 +0.1
3,093,453 + Echvi_2611 0.39 -0.4
3,093,454 - Echvi_2611 0.40 -0.3
3,093,693 - Echvi_2611 0.66 +0.2
3,093,693 - Echvi_2611 0.66 -0.7
3,093,719 + Echvi_2611 0.69 -1.6
3,093,720 - Echvi_2611 0.69 -0.5
3,093,760 + Echvi_2611 0.74 -0.9
3,093,761 - Echvi_2611 0.74 -0.4
3,093,825 - Echvi_2611 0.81 -0.4
3,093,862 - Echvi_2611 0.85 -0.4
3,093,880 + Echvi_2611 0.87 -0.1
3,093,893 + Echvi_2611 0.88 +0.0
3,093,893 + Echvi_2611 0.88 -0.4
3,093,893 + Echvi_2611 0.88 -0.2
3,093,898 + Echvi_2611 0.89 -0.5
3,093,899 - Echvi_2611 0.89 +0.2
3,093,983 - +0.9

Or see this region's nucleotide sequence