Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2481 and Echvi_2482 are separated by 187 nucleotides Echvi_2482 and Echvi_2483 are separated by 202 nucleotides
Echvi_2481: Echvi_2481 - fumarylacetoacetase, at 2,946,772 to 2,948,049
_2481
Echvi_2482: Echvi_2482 - hypothetical protein, at 2,948,237 to 2,948,695
_2482
Echvi_2483: Echvi_2483 - Protein tyrosine/serine phosphatase, at 2,948,898 to 2,949,716
_2483
Position (kb)
2948
2949 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2947.405 kb on - strand, within Echvi_2481 at 2947.507 kb on - strand, within Echvi_2481 at 2947.522 kb on + strand, within Echvi_2481 at 2947.523 kb on - strand, within Echvi_2481 at 2947.745 kb on - strand, within Echvi_2481 at 2947.751 kb on - strand, within Echvi_2481 at 2947.803 kb on + strand, within Echvi_2481 at 2947.807 kb on - strand, within Echvi_2481 at 2947.825 kb on + strand, within Echvi_2481 at 2947.825 kb on + strand, within Echvi_2481 at 2947.825 kb on + strand, within Echvi_2481 at 2947.825 kb on + strand, within Echvi_2481 at 2947.825 kb on + strand at 2947.826 kb on - strand, within Echvi_2481 at 2947.826 kb on - strand, within Echvi_2481 at 2947.826 kb on - strand, within Echvi_2481 at 2947.826 kb on - strand, within Echvi_2481 at 2947.826 kb on - strand, within Echvi_2481 at 2947.826 kb on - strand, within Echvi_2481 at 2947.826 kb on - strand, within Echvi_2481 at 2947.826 kb on - strand, within Echvi_2481 at 2947.826 kb on - strand, within Echvi_2481 at 2948.012 kb on + strand at 2948.012 kb on + strand at 2948.012 kb on + strand at 2948.012 kb on + strand at 2948.013 kb on - strand at 2948.016 kb on + strand at 2948.016 kb on + strand at 2948.017 kb on - strand at 2948.017 kb on - strand at 2948.070 kb on - strand at 2948.074 kb on + strand at 2948.113 kb on + strand at 2948.119 kb on + strand at 2948.119 kb on + strand at 2948.150 kb on + strand at 2948.151 kb on - strand at 2948.151 kb on - strand at 2948.151 kb on - strand at 2948.151 kb on - strand at 2948.164 kb on + strand at 2948.165 kb on - strand at 2948.168 kb on + strand at 2948.169 kb on - strand at 2948.172 kb on + strand at 2948.172 kb on + strand at 2948.173 kb on - strand at 2948.173 kb on - strand at 2948.173 kb on - strand at 2948.179 kb on - strand at 2948.179 kb on - strand at 2948.179 kb on - strand at 2948.195 kb on - strand at 2948.306 kb on + strand, within Echvi_2482 at 2948.342 kb on + strand, within Echvi_2482 at 2948.342 kb on + strand, within Echvi_2482 at 2948.343 kb on - strand, within Echvi_2482 at 2948.358 kb on + strand, within Echvi_2482 at 2948.387 kb on - strand, within Echvi_2482 at 2948.411 kb on + strand, within Echvi_2482 at 2948.411 kb on + strand, within Echvi_2482 at 2948.412 kb on - strand, within Echvi_2482 at 2948.415 kb on - strand, within Echvi_2482 at 2948.415 kb on - strand, within Echvi_2482 at 2948.500 kb on + strand, within Echvi_2482 at 2948.501 kb on - strand, within Echvi_2482 at 2948.507 kb on - strand, within Echvi_2482 at 2948.561 kb on - strand, within Echvi_2482 at 2948.581 kb on + strand, within Echvi_2482 at 2948.581 kb on + strand, within Echvi_2482 at 2948.606 kb on - strand, within Echvi_2482 at 2948.900 kb on - strand at 2948.910 kb on + strand at 2948.911 kb on - strand at 2948.989 kb on + strand, within Echvi_2483 at 2948.990 kb on - strand, within Echvi_2483 at 2949.025 kb on + strand, within Echvi_2483 at 2949.047 kb on + strand, within Echvi_2483 at 2949.047 kb on + strand, within Echvi_2483 at 2949.047 kb on + strand, within Echvi_2483 at 2949.047 kb on + strand, within Echvi_2483 at 2949.048 kb on - strand, within Echvi_2483 at 2949.048 kb on - strand, within Echvi_2483 at 2949.049 kb on + strand, within Echvi_2483 at 2949.049 kb on + strand, within Echvi_2483 at 2949.049 kb on + strand, within Echvi_2483 at 2949.049 kb on + strand, within Echvi_2483 at 2949.049 kb on + strand, within Echvi_2483 at 2949.049 kb on + strand, within Echvi_2483 at 2949.049 kb on + strand, within Echvi_2483 at 2949.050 kb on - strand, within Echvi_2483 at 2949.050 kb on - strand, within Echvi_2483 at 2949.050 kb on - strand, within Echvi_2483 at 2949.050 kb on - strand, within Echvi_2483 at 2949.054 kb on - strand, within Echvi_2483 at 2949.077 kb on - strand, within Echvi_2483 at 2949.131 kb on - strand, within Echvi_2483 at 2949.170 kb on - strand, within Echvi_2483 at 2949.170 kb on - strand, within Echvi_2483 at 2949.186 kb on - strand, within Echvi_2483 at 2949.366 kb on - strand, within Echvi_2483 at 2949.383 kb on + strand, within Echvi_2483 at 2949.383 kb on + strand, within Echvi_2483 at 2949.384 kb on - strand, within Echvi_2483 at 2949.384 kb on - strand, within Echvi_2483 at 2949.384 kb on - strand, within Echvi_2483 at 2949.559 kb on + strand, within Echvi_2483 at 2949.601 kb on - strand, within Echvi_2483 at 2949.658 kb on + strand at 2949.659 kb on - strand at 2949.659 kb on - strand at 2949.659 kb on - strand at 2949.659 kb on - strand at 2949.662 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,947,405 - Echvi_2481 0.50 -1.8 2,947,507 - Echvi_2481 0.58 +0.6 2,947,522 + Echvi_2481 0.59 -0.4 2,947,523 - Echvi_2481 0.59 -1.2 2,947,745 - Echvi_2481 0.76 +1.0 2,947,751 - Echvi_2481 0.77 +1.0 2,947,803 + Echvi_2481 0.81 -1.1 2,947,807 - Echvi_2481 0.81 -0.1 2,947,825 + Echvi_2481 0.82 -1.1 2,947,825 + Echvi_2481 0.82 -1.7 2,947,825 + Echvi_2481 0.82 -0.3 2,947,825 + Echvi_2481 0.82 +0.6 2,947,825 + +2.0 2,947,826 - Echvi_2481 0.82 -0.6 2,947,826 - Echvi_2481 0.82 -0.3 2,947,826 - Echvi_2481 0.82 -1.3 2,947,826 - Echvi_2481 0.82 -1.2 2,947,826 - Echvi_2481 0.82 +0.3 2,947,826 - Echvi_2481 0.82 -1.9 2,947,826 - Echvi_2481 0.82 -1.2 2,947,826 - Echvi_2481 0.82 +0.7 2,947,826 - Echvi_2481 0.82 +0.1 2,948,012 + -0.1 2,948,012 + +0.4 2,948,012 + -0.8 2,948,012 + +0.2 2,948,013 - -1.1 2,948,016 + -1.0 2,948,016 + +0.6 2,948,017 - +0.1 2,948,017 - -0.0 2,948,070 - -0.2 2,948,074 + -0.4 2,948,113 + -0.2 2,948,119 + -0.8 2,948,119 + -0.1 2,948,150 + -1.0 2,948,151 - +0.9 2,948,151 - +1.3 2,948,151 - -1.0 2,948,151 - -0.8 2,948,164 + -1.0 2,948,165 - -0.2 2,948,168 + -1.6 2,948,169 - -0.0 2,948,172 + -0.2 2,948,172 + -0.5 2,948,173 - -0.1 2,948,173 - +1.2 2,948,173 - -0.9 2,948,179 - +0.8 2,948,179 - -2.3 2,948,179 - -0.2 2,948,195 - +0.1 2,948,306 + Echvi_2482 0.15 -0.4 2,948,342 + Echvi_2482 0.23 -0.3 2,948,342 + Echvi_2482 0.23 +0.2 2,948,343 - Echvi_2482 0.23 -0.9 2,948,358 + Echvi_2482 0.26 +0.2 2,948,387 - Echvi_2482 0.33 +0.2 2,948,411 + Echvi_2482 0.38 +1.0 2,948,411 + Echvi_2482 0.38 -0.4 2,948,412 - Echvi_2482 0.38 -0.5 2,948,415 - Echvi_2482 0.39 -0.8 2,948,415 - Echvi_2482 0.39 +0.7 2,948,500 + Echvi_2482 0.57 -1.2 2,948,501 - Echvi_2482 0.58 -0.7 2,948,507 - Echvi_2482 0.59 -1.0 2,948,561 - Echvi_2482 0.71 -2.1 2,948,581 + Echvi_2482 0.75 -0.5 2,948,581 + Echvi_2482 0.75 -0.7 2,948,606 - Echvi_2482 0.80 +0.5 2,948,900 - -0.0 2,948,910 + -0.2 2,948,911 - -0.8 2,948,989 + Echvi_2483 0.11 +0.9 2,948,990 - Echvi_2483 0.11 -0.7 2,949,025 + Echvi_2483 0.16 +0.7 2,949,047 + Echvi_2483 0.18 +0.4 2,949,047 + Echvi_2483 0.18 +2.0 2,949,047 + Echvi_2483 0.18 +0.0 2,949,047 + Echvi_2483 0.18 -1.5 2,949,048 - Echvi_2483 0.18 -3.1 2,949,048 - Echvi_2483 0.18 +0.7 2,949,049 + Echvi_2483 0.18 -0.7 2,949,049 + Echvi_2483 0.18 -0.1 2,949,049 + Echvi_2483 0.18 -0.0 2,949,049 + Echvi_2483 0.18 +0.1 2,949,049 + Echvi_2483 0.18 +0.1 2,949,049 + Echvi_2483 0.18 -0.1 2,949,049 + Echvi_2483 0.18 +0.1 2,949,050 - Echvi_2483 0.19 -0.6 2,949,050 - Echvi_2483 0.19 -0.5 2,949,050 - Echvi_2483 0.19 +0.2 2,949,050 - Echvi_2483 0.19 -0.2 2,949,054 - Echvi_2483 0.19 +0.4 2,949,077 - Echvi_2483 0.22 +1.2 2,949,131 - Echvi_2483 0.28 -0.2 2,949,170 - Echvi_2483 0.33 -0.0 2,949,170 - Echvi_2483 0.33 -2.9 2,949,186 - Echvi_2483 0.35 -1.2 2,949,366 - Echvi_2483 0.57 -0.8 2,949,383 + Echvi_2483 0.59 -0.0 2,949,383 + Echvi_2483 0.59 -2.4 2,949,384 - Echvi_2483 0.59 +0.6 2,949,384 - Echvi_2483 0.59 +0.8 2,949,384 - Echvi_2483 0.59 -1.8 2,949,559 + Echvi_2483 0.81 -2.5 2,949,601 - Echvi_2483 0.86 -0.7 2,949,658 + -1.5 2,949,659 - -1.3 2,949,659 - -0.6 2,949,659 - +0.4 2,949,659 - -0.9 2,949,662 + -1.6
Or see this region's nucleotide sequence