Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2206

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2205 and Echvi_2206 overlap by 1 nucleotidesEchvi_2206 and Echvi_2207 are separated by 29 nucleotidesEchvi_2207 and Echvi_2208 are separated by 7 nucleotides Echvi_2205: Echvi_2205 - hypothetical protein, at 2,631,788 to 2,634,589 _2205 Echvi_2206: Echvi_2206 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit, at 2,634,589 to 2,634,876 _2206 Echvi_2207: Echvi_2207 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 2,634,906 to 2,635,631 _2207 Echvi_2208: Echvi_2208 - Truncated hemoglobins, at 2,635,639 to 2,636,010 _2208 Position (kb) 2634 2635Strain fitness (log2 ratio) -2 -1 0 1 2at 2633.649 kb on + strand, within Echvi_2205at 2633.691 kb on - strand, within Echvi_2205at 2633.699 kb on + strand, within Echvi_2205at 2633.794 kb on + strand, within Echvi_2205at 2633.805 kb on + strand, within Echvi_2205at 2633.805 kb on + strand, within Echvi_2205at 2633.805 kb on + strand, within Echvi_2205at 2633.805 kb on + strand, within Echvi_2205at 2633.805 kb on + strand, within Echvi_2205at 2633.806 kb on - strand, within Echvi_2205at 2633.806 kb on - strand, within Echvi_2205at 2633.806 kb on - strand, within Echvi_2205at 2633.806 kb on - strand, within Echvi_2205at 2633.806 kb on - strand, within Echvi_2205at 2633.806 kb on - strand, within Echvi_2205at 2633.806 kb on - strand, within Echvi_2205at 2633.806 kb on - strand, within Echvi_2205at 2633.806 kb on - strand, within Echvi_2205at 2633.806 kb on - strand, within Echvi_2205at 2633.829 kb on + strand, within Echvi_2205at 2633.829 kb on + strand, within Echvi_2205at 2633.829 kb on + strand, within Echvi_2205at 2633.829 kb on + strand, within Echvi_2205at 2633.829 kb on + strand, within Echvi_2205at 2633.830 kb on - strand, within Echvi_2205at 2633.874 kb on - strand, within Echvi_2205at 2633.886 kb on - strand, within Echvi_2205at 2633.930 kb on + strand, within Echvi_2205at 2633.930 kb on + strand, within Echvi_2205at 2633.930 kb on + strand, within Echvi_2205at 2633.931 kb on - strand, within Echvi_2205at 2633.931 kb on - strand, within Echvi_2205at 2633.934 kb on + strand, within Echvi_2205at 2633.934 kb on + strand, within Echvi_2205at 2633.935 kb on - strand, within Echvi_2205at 2633.935 kb on - strand, within Echvi_2205at 2633.935 kb on - strand, within Echvi_2205at 2633.935 kb on - strand, within Echvi_2205at 2633.935 kb on - strand, within Echvi_2205at 2633.935 kb on - strand, within Echvi_2205at 2633.941 kb on + strand, within Echvi_2205at 2634.181 kb on + strand, within Echvi_2205at 2634.243 kb on + strand, within Echvi_2205at 2634.243 kb on + strand, within Echvi_2205at 2634.244 kb on - strand, within Echvi_2205at 2634.253 kb on + strand, within Echvi_2205at 2634.316 kb on - strandat 2634.394 kb on - strandat 2634.551 kb on + strandat 2634.552 kb on - strandat 2634.942 kb on - strandat 2634.952 kb on - strandat 2635.029 kb on - strand, within Echvi_2207at 2635.029 kb on - strand, within Echvi_2207at 2635.031 kb on - strand, within Echvi_2207at 2635.031 kb on - strand, within Echvi_2207at 2635.031 kb on - strand, within Echvi_2207at 2635.047 kb on - strand, within Echvi_2207at 2635.076 kb on - strand, within Echvi_2207at 2635.140 kb on - strand, within Echvi_2207at 2635.415 kb on - strand, within Echvi_2207at 2635.431 kb on + strand, within Echvi_2207at 2635.432 kb on - strand, within Echvi_2207at 2635.456 kb on - strand, within Echvi_2207at 2635.464 kb on - strand, within Echvi_2207at 2635.475 kb on + strand, within Echvi_2207at 2635.476 kb on - strand, within Echvi_2207at 2635.476 kb on - strand, within Echvi_2207at 2635.600 kb on + strandat 2635.600 kb on + strandat 2635.631 kb on + strandat 2635.631 kb on + strandat 2635.631 kb on + strandat 2635.632 kb on - strandat 2635.632 kb on - strandat 2635.676 kb on + strandat 2635.762 kb on - strand, within Echvi_2208at 2635.771 kb on + strand, within Echvi_2208at 2635.771 kb on + strand, within Echvi_2208at 2635.772 kb on - strand, within Echvi_2208at 2635.772 kb on - strand, within Echvi_2208at 2635.827 kb on - strand, within Echvi_2208

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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2,633,649 + Echvi_2205 0.66 +0.3
2,633,691 - Echvi_2205 0.68 +0.1
2,633,699 + Echvi_2205 0.68 -0.8
2,633,794 + Echvi_2205 0.72 -2.1
2,633,805 + Echvi_2205 0.72 +0.7
2,633,805 + Echvi_2205 0.72 -2.2
2,633,805 + Echvi_2205 0.72 +1.2
2,633,805 + Echvi_2205 0.72 +0.5
2,633,805 + Echvi_2205 0.72 +0.2
2,633,806 - Echvi_2205 0.72 -0.2
2,633,806 - Echvi_2205 0.72 +1.1
2,633,806 - Echvi_2205 0.72 +1.8
2,633,806 - Echvi_2205 0.72 -0.6
2,633,806 - Echvi_2205 0.72 +0.4
2,633,806 - Echvi_2205 0.72 -0.7
2,633,806 - Echvi_2205 0.72 +2.7
2,633,806 - Echvi_2205 0.72 +0.0
2,633,806 - Echvi_2205 0.72 +0.2
2,633,806 - Echvi_2205 0.72 -0.3
2,633,829 + Echvi_2205 0.73 -0.5
2,633,829 + Echvi_2205 0.73 -0.1
2,633,829 + Echvi_2205 0.73 +0.2
2,633,829 + Echvi_2205 0.73 -1.4
2,633,829 + Echvi_2205 0.73 +0.1
2,633,830 - Echvi_2205 0.73 -0.4
2,633,874 - Echvi_2205 0.74 -0.9
2,633,886 - Echvi_2205 0.75 +0.4
2,633,930 + Echvi_2205 0.76 -0.3
2,633,930 + Echvi_2205 0.76 -0.5
2,633,930 + Echvi_2205 0.76 +1.4
2,633,931 - Echvi_2205 0.76 -0.2
2,633,931 - Echvi_2205 0.76 +0.3
2,633,934 + Echvi_2205 0.77 +0.1
2,633,934 + Echvi_2205 0.77 +1.5
2,633,935 - Echvi_2205 0.77 -0.3
2,633,935 - Echvi_2205 0.77 +0.1
2,633,935 - Echvi_2205 0.77 +0.5
2,633,935 - Echvi_2205 0.77 -0.1
2,633,935 - Echvi_2205 0.77 -0.1
2,633,935 - Echvi_2205 0.77 -0.4
2,633,941 + Echvi_2205 0.77 +0.2
2,634,181 + Echvi_2205 0.85 +1.6
2,634,243 + Echvi_2205 0.88 +0.4
2,634,243 + Echvi_2205 0.88 +2.2
2,634,244 - Echvi_2205 0.88 -0.8
2,634,253 + Echvi_2205 0.88 -2.0
2,634,316 - +0.8
2,634,394 - -0.6
2,634,551 + -2.5
2,634,552 - +2.6
2,634,942 - +0.8
2,634,952 - -0.1
2,635,029 - Echvi_2207 0.17 +2.4
2,635,029 - Echvi_2207 0.17 -1.0
2,635,031 - Echvi_2207 0.17 +0.1
2,635,031 - Echvi_2207 0.17 +1.1
2,635,031 - Echvi_2207 0.17 -0.9
2,635,047 - Echvi_2207 0.19 -1.1
2,635,076 - Echvi_2207 0.23 +0.3
2,635,140 - Echvi_2207 0.32 +0.5
2,635,415 - Echvi_2207 0.70 +0.4
2,635,431 + Echvi_2207 0.72 -0.6
2,635,432 - Echvi_2207 0.72 -0.2
2,635,456 - Echvi_2207 0.76 +1.1
2,635,464 - Echvi_2207 0.77 -0.8
2,635,475 + Echvi_2207 0.78 +0.3
2,635,476 - Echvi_2207 0.79 -0.8
2,635,476 - Echvi_2207 0.79 +2.1
2,635,600 + +1.5
2,635,600 + -0.3
2,635,631 + +0.3
2,635,631 + +0.5
2,635,631 + +0.4
2,635,632 - -0.1
2,635,632 - +0.0
2,635,676 + +0.2
2,635,762 - Echvi_2208 0.33 -0.6
2,635,771 + Echvi_2208 0.35 +0.7
2,635,771 + Echvi_2208 0.35 +1.0
2,635,772 - Echvi_2208 0.36 +0.4
2,635,772 - Echvi_2208 0.36 -0.3
2,635,827 - Echvi_2208 0.51 -1.1

Or see this region's nucleotide sequence