Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2142 and Echvi_2143 are separated by 449 nucleotides Echvi_2143 and Echvi_2144 are separated by 41 nucleotides
Echvi_2142: Echvi_2142 - SusD family., at 2,533,169 to 2,534,950
_2142
Echvi_2143: Echvi_2143 - Beta-galactosidase/beta-glucuronidase, at 2,535,400 to 2,538,510
_2143
Echvi_2144: Echvi_2144 - Domain of unknown function (DUF3472)., at 2,538,552 to 2,539,850
_2144
Position (kb)
2535
2536
2537
2538
2539 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2534.406 kb on - strand, within Echvi_2142 at 2534.417 kb on - strand, within Echvi_2142 at 2534.423 kb on + strand, within Echvi_2142 at 2534.557 kb on + strand, within Echvi_2142 at 2534.560 kb on - strand, within Echvi_2142 at 2534.610 kb on + strand, within Echvi_2142 at 2534.610 kb on + strand, within Echvi_2142 at 2534.611 kb on - strand, within Echvi_2142 at 2534.686 kb on - strand, within Echvi_2142 at 2534.686 kb on - strand, within Echvi_2142 at 2534.692 kb on - strand, within Echvi_2142 at 2534.692 kb on - strand, within Echvi_2142 at 2534.831 kb on + strand at 2534.832 kb on - strand at 2534.832 kb on - strand at 2534.833 kb on + strand at 2534.834 kb on - strand at 2534.834 kb on - strand at 2534.964 kb on + strand at 2534.995 kb on - strand at 2534.998 kb on + strand at 2534.999 kb on - strand at 2535.000 kb on + strand at 2535.001 kb on - strand at 2535.001 kb on - strand at 2535.001 kb on - strand at 2535.021 kb on - strand at 2535.022 kb on + strand at 2535.064 kb on - strand at 2535.070 kb on + strand at 2535.071 kb on - strand at 2535.072 kb on + strand at 2535.073 kb on - strand at 2535.465 kb on + strand at 2535.536 kb on - strand at 2535.640 kb on + strand at 2535.641 kb on - strand at 2535.748 kb on + strand, within Echvi_2143 at 2535.801 kb on - strand, within Echvi_2143 at 2535.914 kb on + strand, within Echvi_2143 at 2535.915 kb on - strand, within Echvi_2143 at 2535.931 kb on + strand, within Echvi_2143 at 2535.931 kb on + strand, within Echvi_2143 at 2535.985 kb on + strand, within Echvi_2143 at 2535.986 kb on - strand, within Echvi_2143 at 2535.986 kb on - strand, within Echvi_2143 at 2536.007 kb on + strand, within Echvi_2143 at 2536.016 kb on + strand, within Echvi_2143 at 2536.046 kb on - strand, within Echvi_2143 at 2536.046 kb on - strand, within Echvi_2143 at 2536.133 kb on + strand, within Echvi_2143 at 2536.134 kb on - strand, within Echvi_2143 at 2536.158 kb on + strand, within Echvi_2143 at 2536.158 kb on + strand, within Echvi_2143 at 2536.159 kb on - strand, within Echvi_2143 at 2536.159 kb on - strand, within Echvi_2143 at 2536.159 kb on - strand, within Echvi_2143 at 2536.159 kb on - strand, within Echvi_2143 at 2536.174 kb on - strand, within Echvi_2143 at 2536.385 kb on + strand, within Echvi_2143 at 2536.386 kb on - strand, within Echvi_2143 at 2536.388 kb on - strand, within Echvi_2143 at 2536.388 kb on - strand, within Echvi_2143 at 2536.388 kb on - strand, within Echvi_2143 at 2536.465 kb on + strand, within Echvi_2143 at 2536.465 kb on + strand, within Echvi_2143 at 2536.465 kb on + strand, within Echvi_2143 at 2536.466 kb on - strand, within Echvi_2143 at 2536.665 kb on - strand, within Echvi_2143 at 2536.671 kb on + strand, within Echvi_2143 at 2536.671 kb on + strand, within Echvi_2143 at 2536.676 kb on - strand, within Echvi_2143 at 2536.684 kb on + strand, within Echvi_2143 at 2536.723 kb on + strand, within Echvi_2143 at 2536.723 kb on + strand, within Echvi_2143 at 2536.724 kb on - strand, within Echvi_2143 at 2536.724 kb on - strand, within Echvi_2143 at 2536.724 kb on - strand, within Echvi_2143 at 2536.724 kb on - strand, within Echvi_2143 at 2536.726 kb on + strand, within Echvi_2143 at 2536.726 kb on + strand, within Echvi_2143 at 2536.726 kb on + strand, within Echvi_2143 at 2536.727 kb on - strand, within Echvi_2143 at 2536.727 kb on - strand, within Echvi_2143 at 2536.727 kb on - strand, within Echvi_2143 at 2536.777 kb on - strand, within Echvi_2143 at 2536.809 kb on + strand, within Echvi_2143 at 2536.874 kb on - strand, within Echvi_2143 at 2536.900 kb on + strand, within Echvi_2143 at 2536.901 kb on - strand, within Echvi_2143 at 2536.939 kb on + strand, within Echvi_2143 at 2536.939 kb on + strand, within Echvi_2143 at 2536.940 kb on - strand, within Echvi_2143 at 2536.961 kb on + strand, within Echvi_2143 at 2536.961 kb on + strand, within Echvi_2143 at 2536.962 kb on - strand, within Echvi_2143 at 2536.962 kb on - strand, within Echvi_2143 at 2536.962 kb on - strand, within Echvi_2143 at 2536.972 kb on + strand, within Echvi_2143 at 2537.027 kb on - strand, within Echvi_2143 at 2537.028 kb on + strand, within Echvi_2143 at 2537.028 kb on + strand, within Echvi_2143 at 2537.028 kb on + strand, within Echvi_2143 at 2537.028 kb on + strand, within Echvi_2143 at 2537.028 kb on + strand, within Echvi_2143 at 2537.028 kb on + strand, within Echvi_2143 at 2537.029 kb on - strand, within Echvi_2143 at 2537.042 kb on - strand, within Echvi_2143 at 2537.042 kb on - strand, within Echvi_2143 at 2537.042 kb on - strand, within Echvi_2143 at 2537.061 kb on + strand, within Echvi_2143 at 2537.061 kb on + strand, within Echvi_2143 at 2537.061 kb on + strand, within Echvi_2143 at 2537.062 kb on - strand, within Echvi_2143 at 2537.062 kb on - strand, within Echvi_2143 at 2537.165 kb on + strand, within Echvi_2143 at 2537.285 kb on - strand, within Echvi_2143 at 2537.285 kb on - strand, within Echvi_2143 at 2537.285 kb on - strand, within Echvi_2143 at 2537.352 kb on + strand, within Echvi_2143 at 2537.469 kb on + strand, within Echvi_2143 at 2537.469 kb on + strand, within Echvi_2143 at 2537.469 kb on + strand, within Echvi_2143 at 2537.470 kb on - strand, within Echvi_2143 at 2537.676 kb on - strand, within Echvi_2143 at 2537.676 kb on - strand, within Echvi_2143 at 2537.709 kb on + strand, within Echvi_2143 at 2537.739 kb on + strand, within Echvi_2143 at 2537.739 kb on + strand, within Echvi_2143 at 2537.740 kb on - strand, within Echvi_2143 at 2537.740 kb on - strand, within Echvi_2143 at 2537.740 kb on - strand, within Echvi_2143 at 2537.755 kb on - strand, within Echvi_2143 at 2537.833 kb on - strand, within Echvi_2143 at 2537.833 kb on - strand, within Echvi_2143 at 2537.833 kb on - strand, within Echvi_2143 at 2537.843 kb on - strand, within Echvi_2143 at 2537.905 kb on + strand, within Echvi_2143 at 2537.924 kb on - strand, within Echvi_2143 at 2537.963 kb on - strand, within Echvi_2143 at 2537.963 kb on - strand, within Echvi_2143 at 2537.963 kb on - strand, within Echvi_2143 at 2537.983 kb on - strand, within Echvi_2143 at 2538.032 kb on - strand, within Echvi_2143 at 2538.130 kb on + strand, within Echvi_2143 at 2538.160 kb on - strand, within Echvi_2143 at 2538.175 kb on + strand, within Echvi_2143 at 2538.176 kb on - strand, within Echvi_2143 at 2538.184 kb on + strand, within Echvi_2143 at 2538.184 kb on + strand, within Echvi_2143 at 2538.268 kb on + strand at 2538.294 kb on - strand at 2538.294 kb on - strand at 2538.379 kb on + strand at 2538.379 kb on + strand at 2538.382 kb on - strand at 2538.382 kb on - strand at 2538.382 kb on - strand at 2538.382 kb on - strand at 2538.429 kb on + strand at 2538.457 kb on + strand at 2538.471 kb on + strand at 2538.490 kb on + strand at 2538.490 kb on + strand at 2538.496 kb on - strand at 2538.514 kb on + strand at 2538.515 kb on - strand at 2538.515 kb on - strand at 2538.518 kb on + strand at 2538.519 kb on - strand at 2538.519 kb on - strand at 2538.519 kb on - strand at 2538.549 kb on - strand at 2538.558 kb on - strand at 2538.561 kb on - strand at 2538.561 kb on - strand at 2538.595 kb on + strand at 2538.595 kb on + strand at 2538.678 kb on + strand at 2538.679 kb on - strand at 2538.707 kb on - strand, within Echvi_2144 at 2538.760 kb on - strand, within Echvi_2144 at 2538.764 kb on + strand, within Echvi_2144 at 2538.765 kb on - strand, within Echvi_2144 at 2538.816 kb on - strand, within Echvi_2144 at 2538.834 kb on - strand, within Echvi_2144 at 2538.902 kb on - strand, within Echvi_2144 at 2538.902 kb on - strand, within Echvi_2144 at 2538.928 kb on - strand, within Echvi_2144 at 2539.027 kb on - strand, within Echvi_2144 at 2539.087 kb on + strand, within Echvi_2144 at 2539.093 kb on - strand, within Echvi_2144 at 2539.093 kb on - strand, within Echvi_2144 at 2539.119 kb on - strand, within Echvi_2144 at 2539.173 kb on + strand, within Echvi_2144 at 2539.174 kb on - strand, within Echvi_2144 at 2539.176 kb on + strand, within Echvi_2144 at 2539.177 kb on - strand, within Echvi_2144 at 2539.238 kb on + strand, within Echvi_2144 at 2539.238 kb on + strand, within Echvi_2144 at 2539.239 kb on - strand, within Echvi_2144 at 2539.239 kb on - strand, within Echvi_2144 at 2539.340 kb on + strand, within Echvi_2144 at 2539.410 kb on - strand, within Echvi_2144 at 2539.410 kb on - strand, within Echvi_2144 at 2539.410 kb on - strand, within Echvi_2144 at 2539.410 kb on - strand, within Echvi_2144 at 2539.410 kb on - strand, within Echvi_2144 at 2539.410 kb on - strand, within Echvi_2144 at 2539.454 kb on + strand, within Echvi_2144 at 2539.461 kb on + strand, within Echvi_2144 at 2539.462 kb on - strand, within Echvi_2144 at 2539.462 kb on - strand, within Echvi_2144 at 2539.462 kb on - strand, within Echvi_2144 at 2539.463 kb on + strand, within Echvi_2144 at 2539.464 kb on - strand, within Echvi_2144 at 2539.470 kb on + strand, within Echvi_2144 at 2539.471 kb on - strand, within Echvi_2144 at 2539.471 kb on - strand, within Echvi_2144
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,534,406 - Echvi_2142 0.69 -0.4 2,534,417 - Echvi_2142 0.70 -0.1 2,534,423 + Echvi_2142 0.70 +0.9 2,534,557 + Echvi_2142 0.78 -0.4 2,534,560 - Echvi_2142 0.78 -1.1 2,534,610 + Echvi_2142 0.81 -3.3 2,534,610 + Echvi_2142 0.81 -1.7 2,534,611 - Echvi_2142 0.81 +0.5 2,534,686 - Echvi_2142 0.85 -0.1 2,534,686 - Echvi_2142 0.85 -1.0 2,534,692 - Echvi_2142 0.85 +0.3 2,534,692 - Echvi_2142 0.85 -1.8 2,534,831 + -0.3 2,534,832 - -0.9 2,534,832 - -0.5 2,534,833 + -1.0 2,534,834 - +0.0 2,534,834 - +0.7 2,534,964 + +0.5 2,534,995 - +0.5 2,534,998 + -1.5 2,534,999 - -1.1 2,535,000 + -1.1 2,535,001 - -0.5 2,535,001 - +0.8 2,535,001 - -0.2 2,535,021 - -1.3 2,535,022 + +0.7 2,535,064 - +1.4 2,535,070 + -0.3 2,535,071 - -1.3 2,535,072 + -0.6 2,535,073 - +2.5 2,535,465 + -0.7 2,535,536 - +0.5 2,535,640 + -0.3 2,535,641 - +2.6 2,535,748 + Echvi_2143 0.11 +1.8 2,535,801 - Echvi_2143 0.13 -0.7 2,535,914 + Echvi_2143 0.17 -0.5 2,535,915 - Echvi_2143 0.17 +0.8 2,535,931 + Echvi_2143 0.17 -0.2 2,535,931 + Echvi_2143 0.17 -0.1 2,535,985 + Echvi_2143 0.19 +1.5 2,535,986 - Echvi_2143 0.19 -1.6 2,535,986 - Echvi_2143 0.19 -1.2 2,536,007 + Echvi_2143 0.20 +0.0 2,536,016 + Echvi_2143 0.20 -2.3 2,536,046 - Echvi_2143 0.21 +1.1 2,536,046 - Echvi_2143 0.21 +0.9 2,536,133 + Echvi_2143 0.24 +0.1 2,536,134 - Echvi_2143 0.24 -0.0 2,536,158 + Echvi_2143 0.24 +0.3 2,536,158 + Echvi_2143 0.24 -0.9 2,536,159 - Echvi_2143 0.24 +1.0 2,536,159 - Echvi_2143 0.24 -0.3 2,536,159 - Echvi_2143 0.24 +0.8 2,536,159 - Echvi_2143 0.24 +0.5 2,536,174 - Echvi_2143 0.25 -0.7 2,536,385 + Echvi_2143 0.32 -0.0 2,536,386 - Echvi_2143 0.32 -0.9 2,536,388 - Echvi_2143 0.32 +0.8 2,536,388 - Echvi_2143 0.32 +1.6 2,536,388 - Echvi_2143 0.32 +0.3 2,536,465 + Echvi_2143 0.34 -1.2 2,536,465 + Echvi_2143 0.34 -0.1 2,536,465 + Echvi_2143 0.34 +1.0 2,536,466 - Echvi_2143 0.34 +1.6 2,536,665 - Echvi_2143 0.41 +0.4 2,536,671 + Echvi_2143 0.41 +1.0 2,536,671 + Echvi_2143 0.41 +0.2 2,536,676 - Echvi_2143 0.41 +0.6 2,536,684 + Echvi_2143 0.41 -0.4 2,536,723 + Echvi_2143 0.43 -0.3 2,536,723 + Echvi_2143 0.43 +0.5 2,536,724 - Echvi_2143 0.43 -0.1 2,536,724 - Echvi_2143 0.43 +2.0 2,536,724 - Echvi_2143 0.43 -0.2 2,536,724 - Echvi_2143 0.43 -1.3 2,536,726 + Echvi_2143 0.43 -0.5 2,536,726 + Echvi_2143 0.43 -0.8 2,536,726 + Echvi_2143 0.43 -0.9 2,536,727 - Echvi_2143 0.43 -1.1 2,536,727 - Echvi_2143 0.43 -0.2 2,536,727 - Echvi_2143 0.43 +0.0 2,536,777 - Echvi_2143 0.44 +0.2 2,536,809 + Echvi_2143 0.45 -1.4 2,536,874 - Echvi_2143 0.47 -0.5 2,536,900 + Echvi_2143 0.48 -0.5 2,536,901 - Echvi_2143 0.48 -0.5 2,536,939 + Echvi_2143 0.49 -1.1 2,536,939 + Echvi_2143 0.49 -1.2 2,536,940 - Echvi_2143 0.50 +0.7 2,536,961 + Echvi_2143 0.50 -0.1 2,536,961 + Echvi_2143 0.50 +2.2 2,536,962 - Echvi_2143 0.50 +0.9 2,536,962 - Echvi_2143 0.50 -0.3 2,536,962 - Echvi_2143 0.50 +0.3 2,536,972 + Echvi_2143 0.51 +0.8 2,537,027 - Echvi_2143 0.52 +0.0 2,537,028 + Echvi_2143 0.52 +1.8 2,537,028 + Echvi_2143 0.52 +1.0 2,537,028 + Echvi_2143 0.52 -0.9 2,537,028 + Echvi_2143 0.52 +1.4 2,537,028 + Echvi_2143 0.52 -1.5 2,537,028 + Echvi_2143 0.52 +0.0 2,537,029 - Echvi_2143 0.52 +1.9 2,537,042 - Echvi_2143 0.53 +0.0 2,537,042 - Echvi_2143 0.53 +0.6 2,537,042 - Echvi_2143 0.53 +1.1 2,537,061 + Echvi_2143 0.53 -1.0 2,537,061 + Echvi_2143 0.53 +0.4 2,537,061 + Echvi_2143 0.53 +0.8 2,537,062 - Echvi_2143 0.53 -1.3 2,537,062 - Echvi_2143 0.53 -1.4 2,537,165 + Echvi_2143 0.57 -0.2 2,537,285 - Echvi_2143 0.61 -1.8 2,537,285 - Echvi_2143 0.61 +1.5 2,537,285 - Echvi_2143 0.61 -3.0 2,537,352 + Echvi_2143 0.63 -0.0 2,537,469 + Echvi_2143 0.67 +0.5 2,537,469 + Echvi_2143 0.67 +0.9 2,537,469 + Echvi_2143 0.67 -1.0 2,537,470 - Echvi_2143 0.67 -1.5 2,537,676 - Echvi_2143 0.73 -2.2 2,537,676 - Echvi_2143 0.73 -0.2 2,537,709 + Echvi_2143 0.74 -0.2 2,537,739 + Echvi_2143 0.75 +1.5 2,537,739 + Echvi_2143 0.75 +1.1 2,537,740 - Echvi_2143 0.75 -1.5 2,537,740 - Echvi_2143 0.75 +0.3 2,537,740 - Echvi_2143 0.75 +0.4 2,537,755 - Echvi_2143 0.76 -1.7 2,537,833 - Echvi_2143 0.78 -2.2 2,537,833 - Echvi_2143 0.78 -0.6 2,537,833 - Echvi_2143 0.78 -1.3 2,537,843 - Echvi_2143 0.79 +0.4 2,537,905 + Echvi_2143 0.81 -0.4 2,537,924 - Echvi_2143 0.81 +0.2 2,537,963 - Echvi_2143 0.82 +0.8 2,537,963 - Echvi_2143 0.82 +0.5 2,537,963 - Echvi_2143 0.82 -2.5 2,537,983 - Echvi_2143 0.83 -0.3 2,538,032 - Echvi_2143 0.85 -0.5 2,538,130 + Echvi_2143 0.88 +0.0 2,538,160 - Echvi_2143 0.89 +3.5 2,538,175 + Echvi_2143 0.89 -0.9 2,538,176 - Echvi_2143 0.89 -0.6 2,538,184 + Echvi_2143 0.89 +0.3 2,538,184 + Echvi_2143 0.89 -1.9 2,538,268 + +0.5 2,538,294 - +0.6 2,538,294 - -1.6 2,538,379 + +2.2 2,538,379 + -0.3 2,538,382 - -0.8 2,538,382 - +0.8 2,538,382 - -0.5 2,538,382 - +0.7 2,538,429 + -0.7 2,538,457 + +1.7 2,538,471 + -1.2 2,538,490 + +0.1 2,538,490 + +1.8 2,538,496 - +2.1 2,538,514 + -0.2 2,538,515 - -0.8 2,538,515 - +0.6 2,538,518 + +0.3 2,538,519 - +1.0 2,538,519 - +1.3 2,538,519 - -1.0 2,538,549 - -1.2 2,538,558 - -0.8 2,538,561 - -0.6 2,538,561 - +0.0 2,538,595 + +0.1 2,538,595 + -1.7 2,538,678 + -0.5 2,538,679 - +1.8 2,538,707 - Echvi_2144 0.12 +0.3 2,538,760 - Echvi_2144 0.16 -0.3 2,538,764 + Echvi_2144 0.16 -0.1 2,538,765 - Echvi_2144 0.16 -2.1 2,538,816 - Echvi_2144 0.20 +0.4 2,538,834 - Echvi_2144 0.22 -0.5 2,538,902 - Echvi_2144 0.27 -1.0 2,538,902 - Echvi_2144 0.27 -1.4 2,538,928 - Echvi_2144 0.29 -0.4 2,539,027 - Echvi_2144 0.37 +0.3 2,539,087 + Echvi_2144 0.41 -1.5 2,539,093 - Echvi_2144 0.42 -0.3 2,539,093 - Echvi_2144 0.42 +1.1 2,539,119 - Echvi_2144 0.44 +0.1 2,539,173 + Echvi_2144 0.48 -1.0 2,539,174 - Echvi_2144 0.48 -2.0 2,539,176 + Echvi_2144 0.48 -0.6 2,539,177 - Echvi_2144 0.48 -0.8 2,539,238 + Echvi_2144 0.53 +0.5 2,539,238 + Echvi_2144 0.53 +0.9 2,539,239 - Echvi_2144 0.53 -0.2 2,539,239 - Echvi_2144 0.53 -1.7 2,539,340 + Echvi_2144 0.61 +0.6 2,539,410 - Echvi_2144 0.66 -0.1 2,539,410 - Echvi_2144 0.66 -0.5 2,539,410 - Echvi_2144 0.66 +0.3 2,539,410 - Echvi_2144 0.66 +0.7 2,539,410 - Echvi_2144 0.66 +1.0 2,539,410 - Echvi_2144 0.66 -0.5 2,539,454 + Echvi_2144 0.69 +0.1 2,539,461 + Echvi_2144 0.70 +0.5 2,539,462 - Echvi_2144 0.70 -0.5 2,539,462 - Echvi_2144 0.70 +1.0 2,539,462 - Echvi_2144 0.70 -2.1 2,539,463 + Echvi_2144 0.70 +1.4 2,539,464 - Echvi_2144 0.70 -0.4 2,539,470 + Echvi_2144 0.71 +0.3 2,539,471 - Echvi_2144 0.71 +0.2 2,539,471 - Echvi_2144 0.71 +0.1
Or see this region's nucleotide sequence