Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2025 and Echvi_2026 are separated by 7 nucleotides Echvi_2026 and Echvi_2027 are separated by 4 nucleotides Echvi_2027 and Echvi_2028 are separated by 133 nucleotides
Echvi_2025: Echvi_2025 - Uncharacterized protein conserved in bacteria, at 2,386,207 to 2,387,754
_2025
Echvi_2026: Echvi_2026 - N-acetylmuramic acid 6-phosphate etherase, at 2,387,762 to 2,388,586
_2026
Echvi_2027: Echvi_2027 - Predicted N-acetylglucosamine kinase, at 2,388,591 to 2,389,451
_2027
Echvi_2028: Echvi_2028 - Negative regulator of beta-lactamase expression, at 2,389,585 to 2,390,481
_2028
Position (kb)
2388
2389
2390 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2387.726 kb on - strand at 2387.775 kb on + strand at 2387.783 kb on + strand at 2387.783 kb on + strand at 2387.908 kb on + strand, within Echvi_2026 at 2387.909 kb on - strand, within Echvi_2026 at 2387.945 kb on - strand, within Echvi_2026 at 2387.945 kb on - strand, within Echvi_2026 at 2387.959 kb on + strand, within Echvi_2026 at 2388.111 kb on - strand, within Echvi_2026 at 2388.134 kb on + strand, within Echvi_2026 at 2388.135 kb on - strand, within Echvi_2026 at 2388.135 kb on - strand, within Echvi_2026 at 2388.135 kb on - strand, within Echvi_2026 at 2388.150 kb on + strand, within Echvi_2026 at 2388.150 kb on + strand, within Echvi_2026 at 2388.150 kb on + strand, within Echvi_2026 at 2388.150 kb on + strand, within Echvi_2026 at 2388.293 kb on - strand, within Echvi_2026 at 2388.293 kb on - strand, within Echvi_2026 at 2388.387 kb on + strand, within Echvi_2026 at 2388.592 kb on + strand at 2388.593 kb on - strand at 2388.596 kb on + strand at 2388.614 kb on + strand at 2388.642 kb on - strand at 2388.652 kb on - strand at 2388.669 kb on + strand at 2388.670 kb on - strand at 2388.689 kb on + strand, within Echvi_2027 at 2388.689 kb on + strand, within Echvi_2027 at 2388.690 kb on - strand, within Echvi_2027 at 2388.690 kb on - strand, within Echvi_2027 at 2388.690 kb on - strand, within Echvi_2027 at 2388.716 kb on - strand, within Echvi_2027 at 2388.738 kb on - strand, within Echvi_2027 at 2388.738 kb on - strand, within Echvi_2027 at 2388.774 kb on + strand, within Echvi_2027 at 2388.774 kb on + strand, within Echvi_2027 at 2388.774 kb on + strand, within Echvi_2027 at 2388.775 kb on - strand, within Echvi_2027 at 2388.775 kb on - strand, within Echvi_2027 at 2388.775 kb on - strand, within Echvi_2027 at 2388.778 kb on + strand, within Echvi_2027 at 2388.778 kb on + strand, within Echvi_2027 at 2388.778 kb on + strand, within Echvi_2027 at 2388.778 kb on + strand, within Echvi_2027 at 2388.779 kb on - strand, within Echvi_2027 at 2388.779 kb on - strand, within Echvi_2027 at 2388.779 kb on - strand, within Echvi_2027 at 2388.842 kb on - strand, within Echvi_2027 at 2388.842 kb on - strand, within Echvi_2027 at 2388.842 kb on - strand, within Echvi_2027 at 2388.893 kb on + strand, within Echvi_2027 at 2388.893 kb on + strand, within Echvi_2027 at 2388.893 kb on + strand, within Echvi_2027 at 2388.894 kb on - strand, within Echvi_2027 at 2388.897 kb on - strand, within Echvi_2027 at 2388.939 kb on - strand, within Echvi_2027 at 2389.040 kb on + strand, within Echvi_2027 at 2389.040 kb on + strand, within Echvi_2027 at 2389.041 kb on - strand, within Echvi_2027 at 2389.042 kb on + strand, within Echvi_2027 at 2389.042 kb on + strand, within Echvi_2027 at 2389.065 kb on + strand, within Echvi_2027 at 2389.066 kb on - strand, within Echvi_2027 at 2389.066 kb on - strand, within Echvi_2027 at 2389.097 kb on + strand, within Echvi_2027 at 2389.097 kb on + strand, within Echvi_2027 at 2389.098 kb on - strand, within Echvi_2027 at 2389.115 kb on + strand, within Echvi_2027 at 2389.116 kb on - strand, within Echvi_2027 at 2389.174 kb on + strand, within Echvi_2027 at 2389.174 kb on + strand, within Echvi_2027 at 2389.175 kb on - strand, within Echvi_2027 at 2389.177 kb on - strand, within Echvi_2027 at 2389.224 kb on + strand, within Echvi_2027 at 2389.422 kb on - strand at 2389.451 kb on + strand at 2389.451 kb on + strand at 2389.451 kb on + strand at 2389.452 kb on - strand at 2389.586 kb on + strand at 2389.608 kb on + strand at 2389.609 kb on - strand at 2389.617 kb on + strand at 2389.617 kb on + strand at 2389.617 kb on + strand at 2389.617 kb on + strand at 2389.617 kb on + strand at 2389.618 kb on - strand at 2389.618 kb on - strand at 2389.618 kb on - strand at 2389.618 kb on - strand at 2389.618 kb on - strand at 2389.713 kb on - strand, within Echvi_2028 at 2389.785 kb on + strand, within Echvi_2028 at 2389.838 kb on + strand, within Echvi_2028 at 2389.838 kb on + strand, within Echvi_2028 at 2389.838 kb on + strand, within Echvi_2028 at 2389.838 kb on + strand, within Echvi_2028 at 2389.838 kb on + strand, within Echvi_2028 at 2389.839 kb on - strand, within Echvi_2028 at 2389.843 kb on + strand, within Echvi_2028 at 2389.844 kb on - strand, within Echvi_2028 at 2389.844 kb on - strand, within Echvi_2028 at 2389.951 kb on - strand, within Echvi_2028 at 2389.956 kb on - strand, within Echvi_2028 at 2389.956 kb on - strand, within Echvi_2028 at 2389.987 kb on + strand, within Echvi_2028 at 2390.114 kb on + strand, within Echvi_2028 at 2390.115 kb on - strand, within Echvi_2028 at 2390.115 kb on - strand, within Echvi_2028 at 2390.115 kb on - strand, within Echvi_2028 at 2390.139 kb on + strand, within Echvi_2028 at 2390.159 kb on + strand, within Echvi_2028 at 2390.159 kb on + strand, within Echvi_2028 at 2390.196 kb on + strand, within Echvi_2028 at 2390.197 kb on - strand, within Echvi_2028 at 2390.197 kb on - strand, within Echvi_2028 at 2390.429 kb on - strand at 2390.443 kb on - strand at 2390.447 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,387,726 - +0.3 2,387,775 + -0.6 2,387,783 + -0.3 2,387,783 + +0.8 2,387,908 + Echvi_2026 0.18 -0.6 2,387,909 - Echvi_2026 0.18 +0.0 2,387,945 - Echvi_2026 0.22 -0.4 2,387,945 - Echvi_2026 0.22 +0.7 2,387,959 + Echvi_2026 0.24 -1.7 2,388,111 - Echvi_2026 0.42 -0.5 2,388,134 + Echvi_2026 0.45 -0.5 2,388,135 - Echvi_2026 0.45 -1.5 2,388,135 - Echvi_2026 0.45 -0.9 2,388,135 - Echvi_2026 0.45 -0.2 2,388,150 + Echvi_2026 0.47 +0.2 2,388,150 + Echvi_2026 0.47 -1.0 2,388,150 + Echvi_2026 0.47 +2.7 2,388,150 + Echvi_2026 0.47 -1.4 2,388,293 - Echvi_2026 0.64 -0.5 2,388,293 - Echvi_2026 0.64 +1.4 2,388,387 + Echvi_2026 0.76 -1.0 2,388,592 + +0.8 2,388,593 - -0.5 2,388,596 + +1.2 2,388,614 + -1.0 2,388,642 - -0.4 2,388,652 - -1.9 2,388,669 + +0.3 2,388,670 - +0.1 2,388,689 + Echvi_2027 0.11 +0.5 2,388,689 + Echvi_2027 0.11 -1.5 2,388,690 - Echvi_2027 0.11 +0.1 2,388,690 - Echvi_2027 0.11 +0.3 2,388,690 - Echvi_2027 0.11 -0.2 2,388,716 - Echvi_2027 0.15 +0.9 2,388,738 - Echvi_2027 0.17 -1.6 2,388,738 - Echvi_2027 0.17 -1.0 2,388,774 + Echvi_2027 0.21 -0.1 2,388,774 + Echvi_2027 0.21 -1.2 2,388,774 + Echvi_2027 0.21 -1.2 2,388,775 - Echvi_2027 0.21 -1.4 2,388,775 - Echvi_2027 0.21 +0.0 2,388,775 - Echvi_2027 0.21 -0.1 2,388,778 + Echvi_2027 0.22 -0.7 2,388,778 + Echvi_2027 0.22 -0.1 2,388,778 + Echvi_2027 0.22 -0.4 2,388,778 + Echvi_2027 0.22 -1.3 2,388,779 - Echvi_2027 0.22 +0.8 2,388,779 - Echvi_2027 0.22 -0.6 2,388,779 - Echvi_2027 0.22 +0.5 2,388,842 - Echvi_2027 0.29 -3.5 2,388,842 - Echvi_2027 0.29 +0.1 2,388,842 - Echvi_2027 0.29 +0.0 2,388,893 + Echvi_2027 0.35 -0.3 2,388,893 + Echvi_2027 0.35 -2.5 2,388,893 + Echvi_2027 0.35 -1.1 2,388,894 - Echvi_2027 0.35 -1.7 2,388,897 - Echvi_2027 0.36 +0.1 2,388,939 - Echvi_2027 0.40 -0.5 2,389,040 + Echvi_2027 0.52 -0.9 2,389,040 + Echvi_2027 0.52 +0.9 2,389,041 - Echvi_2027 0.52 -0.5 2,389,042 + Echvi_2027 0.52 -0.6 2,389,042 + Echvi_2027 0.52 -0.2 2,389,065 + Echvi_2027 0.55 +0.8 2,389,066 - Echvi_2027 0.55 -1.1 2,389,066 - Echvi_2027 0.55 -2.4 2,389,097 + Echvi_2027 0.59 +0.6 2,389,097 + Echvi_2027 0.59 -0.4 2,389,098 - Echvi_2027 0.59 +0.4 2,389,115 + Echvi_2027 0.61 -1.5 2,389,116 - Echvi_2027 0.61 -1.1 2,389,174 + Echvi_2027 0.68 -1.8 2,389,174 + Echvi_2027 0.68 -2.6 2,389,175 - Echvi_2027 0.68 -0.3 2,389,177 - Echvi_2027 0.68 -0.8 2,389,224 + Echvi_2027 0.74 +1.4 2,389,422 - -2.7 2,389,451 + -1.9 2,389,451 + -1.1 2,389,451 + +0.3 2,389,452 - +0.0 2,389,586 + -1.4 2,389,608 + -1.4 2,389,609 - +0.0 2,389,617 + -1.1 2,389,617 + +0.3 2,389,617 + +2.2 2,389,617 + +0.1 2,389,617 + -2.0 2,389,618 - +0.8 2,389,618 - -1.0 2,389,618 - -0.3 2,389,618 - -0.7 2,389,618 - +1.5 2,389,713 - Echvi_2028 0.14 -0.2 2,389,785 + Echvi_2028 0.22 -0.8 2,389,838 + Echvi_2028 0.28 -2.3 2,389,838 + Echvi_2028 0.28 -0.4 2,389,838 + Echvi_2028 0.28 +0.1 2,389,838 + Echvi_2028 0.28 +0.3 2,389,838 + Echvi_2028 0.28 -1.0 2,389,839 - Echvi_2028 0.28 -0.5 2,389,843 + Echvi_2028 0.29 +0.2 2,389,844 - Echvi_2028 0.29 -0.8 2,389,844 - Echvi_2028 0.29 +1.7 2,389,951 - Echvi_2028 0.41 +0.5 2,389,956 - Echvi_2028 0.41 -1.8 2,389,956 - Echvi_2028 0.41 +1.5 2,389,987 + Echvi_2028 0.45 -0.3 2,390,114 + Echvi_2028 0.59 +0.0 2,390,115 - Echvi_2028 0.59 +0.6 2,390,115 - Echvi_2028 0.59 -0.1 2,390,115 - Echvi_2028 0.59 +1.9 2,390,139 + Echvi_2028 0.62 +0.2 2,390,159 + Echvi_2028 0.64 +1.0 2,390,159 + Echvi_2028 0.64 -0.4 2,390,196 + Echvi_2028 0.68 -1.1 2,390,197 - Echvi_2028 0.68 +1.3 2,390,197 - Echvi_2028 0.68 +0.8 2,390,429 - +0.5 2,390,443 - -0.8 2,390,447 - +0.0
Or see this region's nucleotide sequence