Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1412

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_1411 and Echvi_1412 are separated by 60 nucleotidesEchvi_1412 and Echvi_1413 are separated by 52 nucleotidesEchvi_1413 and Echvi_1414 are separated by 71 nucleotides Echvi_1411: Echvi_1411 - DGQHR domain, at 1,627,815 to 1,628,915 _1411 Echvi_1412: Echvi_1412 - hypothetical protein, at 1,628,976 to 1,629,290 _1412 Echvi_1413: Echvi_1413 - Transposase., at 1,629,343 to 1,629,609 _1413 Echvi_1414: Echvi_1414 - Transposase and inactivated derivatives, at 1,629,681 to 1,630,505 _1414 Position (kb) 1628 1629 1630Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1628.017 kb on - strand, within Echvi_1411at 1628.017 kb on - strand, within Echvi_1411at 1628.017 kb on - strand, within Echvi_1411at 1628.017 kb on - strand, within Echvi_1411at 1628.022 kb on - strand, within Echvi_1411at 1628.022 kb on - strand, within Echvi_1411at 1628.081 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.085 kb on + strand, within Echvi_1411at 1628.086 kb on - strand, within Echvi_1411at 1628.086 kb on - strand, within Echvi_1411at 1628.086 kb on - strand, within Echvi_1411at 1628.086 kb on - strand, within Echvi_1411at 1628.086 kb on - strand, within Echvi_1411at 1628.086 kb on - strand, within Echvi_1411at 1628.086 kb on - strand, within Echvi_1411at 1628.086 kb on - strand, within Echvi_1411at 1628.086 kb on - strand, within Echvi_1411at 1628.086 kb on - strand, within Echvi_1411at 1628.086 kb on - strand, within Echvi_1411at 1628.186 kb on - strand, within Echvi_1411at 1628.186 kb on - strand, within Echvi_1411at 1628.228 kb on + strand, within Echvi_1411at 1628.228 kb on + strand, within Echvi_1411at 1628.229 kb on - strand, within Echvi_1411at 1628.270 kb on + strand, within Echvi_1411at 1628.271 kb on - strand, within Echvi_1411at 1628.271 kb on - strand, within Echvi_1411at 1628.280 kb on - strand, within Echvi_1411at 1628.291 kb on + strand, within Echvi_1411at 1628.354 kb on + strand, within Echvi_1411at 1628.354 kb on + strand, within Echvi_1411at 1628.460 kb on - strand, within Echvi_1411at 1628.474 kb on + strand, within Echvi_1411at 1628.475 kb on - strand, within Echvi_1411at 1628.480 kb on - strand, within Echvi_1411at 1628.480 kb on - strand, within Echvi_1411at 1628.484 kb on + strand, within Echvi_1411at 1628.484 kb on + strand, within Echvi_1411at 1628.485 kb on - strand, within Echvi_1411at 1628.487 kb on - strand, within Echvi_1411at 1628.520 kb on + strand, within Echvi_1411at 1628.520 kb on + strand, within Echvi_1411at 1628.520 kb on + strand, within Echvi_1411at 1628.521 kb on - strand, within Echvi_1411at 1628.522 kb on + strand, within Echvi_1411at 1628.523 kb on - strand, within Echvi_1411at 1628.648 kb on - strand, within Echvi_1411at 1628.690 kb on + strand, within Echvi_1411at 1628.719 kb on + strand, within Echvi_1411at 1628.720 kb on - strand, within Echvi_1411at 1628.720 kb on - strand, within Echvi_1411at 1628.720 kb on - strand, within Echvi_1411at 1628.720 kb on - strand, within Echvi_1411at 1628.726 kb on + strand, within Echvi_1411at 1628.727 kb on - strand, within Echvi_1411at 1628.785 kb on + strand, within Echvi_1411at 1628.794 kb on - strand, within Echvi_1411at 1628.794 kb on - strand, within Echvi_1411at 1628.847 kb on - strandat 1628.850 kb on + strandat 1628.851 kb on - strandat 1628.855 kb on - strandat 1628.883 kb on + strandat 1628.884 kb on - strandat 1628.884 kb on - strandat 1628.886 kb on - strandat 1628.914 kb on - strandat 1628.922 kb on - strandat 1628.922 kb on - strandat 1628.940 kb on + strandat 1628.941 kb on - strandat 1628.942 kb on + strandat 1628.942 kb on + strandat 1628.942 kb on + strandat 1628.943 kb on - strandat 1628.943 kb on - strandat 1628.943 kb on - strandat 1628.943 kb on - strandat 1628.943 kb on - strandat 1628.943 kb on - strandat 1628.943 kb on - strandat 1628.943 kb on - strandat 1628.944 kb on + strandat 1628.944 kb on + strandat 1628.944 kb on + strandat 1628.944 kb on + strandat 1628.945 kb on - strandat 1628.945 kb on - strandat 1628.945 kb on - strandat 1628.946 kb on + strandat 1628.946 kb on + strandat 1628.947 kb on - strandat 1628.947 kb on - strandat 1628.986 kb on + strandat 1629.032 kb on + strand, within Echvi_1412at 1629.032 kb on + strand, within Echvi_1412at 1629.032 kb on + strand, within Echvi_1412at 1629.033 kb on - strand, within Echvi_1412at 1629.033 kb on - strand, within Echvi_1412at 1629.035 kb on + strand, within Echvi_1412at 1629.056 kb on + strand, within Echvi_1412at 1629.057 kb on - strand, within Echvi_1412at 1629.105 kb on + strand, within Echvi_1412at 1629.105 kb on + strand, within Echvi_1412at 1629.108 kb on - strand, within Echvi_1412at 1629.108 kb on - strand, within Echvi_1412at 1629.108 kb on - strand, within Echvi_1412at 1629.108 kb on - strand, within Echvi_1412at 1629.111 kb on + strand, within Echvi_1412at 1629.213 kb on - strand, within Echvi_1412at 1629.216 kb on - strand, within Echvi_1412at 1629.224 kb on + strand, within Echvi_1412at 1629.225 kb on - strand, within Echvi_1412at 1629.263 kb on + strandat 1629.263 kb on + strandat 1629.280 kb on + strandat 1629.281 kb on - strandat 1629.281 kb on - strandat 1629.289 kb on - strandat 1629.315 kb on - strandat 1629.315 kb on - strandat 1629.323 kb on - strandat 1629.328 kb on - strandat 1629.337 kb on + strandat 1629.439 kb on - strand, within Echvi_1413at 1629.439 kb on - strand, within Echvi_1413at 1629.439 kb on - strand, within Echvi_1413at 1629.538 kb on + strand, within Echvi_1413at 1629.538 kb on + strand, within Echvi_1413at 1629.539 kb on - strand, within Echvi_1413at 1629.573 kb on + strand, within Echvi_1413at 1629.640 kb on - strandat 1629.680 kb on + strandat 1629.681 kb on - strandat 1629.681 kb on - strandat 1629.681 kb on - strandat 1629.692 kb on + strandat 1629.693 kb on - strandat 1629.708 kb on + strandat 1629.708 kb on + strandat 1629.711 kb on + strandat 1629.711 kb on + strandat 1629.777 kb on + strand, within Echvi_1414at 1629.777 kb on + strand, within Echvi_1414at 1629.778 kb on - strand, within Echvi_1414at 1629.804 kb on + strand, within Echvi_1414at 1629.805 kb on - strand, within Echvi_1414at 1629.805 kb on - strand, within Echvi_1414at 1629.828 kb on + strand, within Echvi_1414at 1629.828 kb on + strand, within Echvi_1414at 1629.829 kb on - strand, within Echvi_1414at 1629.829 kb on - strand, within Echvi_1414at 1629.830 kb on + strand, within Echvi_1414at 1629.830 kb on + strand, within Echvi_1414at 1629.830 kb on + strand, within Echvi_1414at 1629.830 kb on + strand, within Echvi_1414at 1629.831 kb on - strand, within Echvi_1414at 1629.861 kb on + strand, within Echvi_1414at 1629.862 kb on - strand, within Echvi_1414at 1629.883 kb on + strand, within Echvi_1414at 1629.884 kb on - strand, within Echvi_1414at 1629.984 kb on - strand, within Echvi_1414at 1630.088 kb on - strand, within Echvi_1414at 1630.163 kb on + strand, within Echvi_1414at 1630.163 kb on + strand, within Echvi_1414at 1630.199 kb on + strand, within Echvi_1414at 1630.199 kb on + strand, within Echvi_1414at 1630.203 kb on - strand, within Echvi_1414at 1630.203 kb on - strand, within Echvi_1414at 1630.218 kb on - strand, within Echvi_1414at 1630.252 kb on + strand, within Echvi_1414at 1630.253 kb on - strand, within Echvi_1414

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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1,628,017 - Echvi_1411 0.18 -0.8
1,628,017 - Echvi_1411 0.18 +2.1
1,628,017 - Echvi_1411 0.18 +1.0
1,628,017 - Echvi_1411 0.18 +0.3
1,628,022 - Echvi_1411 0.19 -1.9
1,628,022 - Echvi_1411 0.19 +0.0
1,628,081 + Echvi_1411 0.24 +1.4
1,628,085 + Echvi_1411 0.25 -0.2
1,628,085 + Echvi_1411 0.25 -0.4
1,628,085 + Echvi_1411 0.25 -0.8
1,628,085 + Echvi_1411 0.25 -0.9
1,628,085 + Echvi_1411 0.25 -1.8
1,628,085 + Echvi_1411 0.25 +0.2
1,628,085 + Echvi_1411 0.25 -0.3
1,628,085 + Echvi_1411 0.25 +0.1
1,628,085 + Echvi_1411 0.25 +0.0
1,628,085 + Echvi_1411 0.25 +0.3
1,628,085 + Echvi_1411 0.25 -0.2
1,628,085 + Echvi_1411 0.25 +0.5
1,628,086 - Echvi_1411 0.25 -0.7
1,628,086 - Echvi_1411 0.25 -0.2
1,628,086 - Echvi_1411 0.25 +0.6
1,628,086 - Echvi_1411 0.25 +1.2
1,628,086 - Echvi_1411 0.25 -0.6
1,628,086 - Echvi_1411 0.25 +0.0
1,628,086 - Echvi_1411 0.25 -0.2
1,628,086 - Echvi_1411 0.25 -2.2
1,628,086 - Echvi_1411 0.25 -2.6
1,628,086 - Echvi_1411 0.25 -2.6
1,628,086 - Echvi_1411 0.25 +0.4
1,628,186 - Echvi_1411 0.34 -0.9
1,628,186 - Echvi_1411 0.34 +0.1
1,628,228 + Echvi_1411 0.38 -2.4
1,628,228 + Echvi_1411 0.38 -0.1
1,628,229 - Echvi_1411 0.38 -0.4
1,628,270 + Echvi_1411 0.41 +0.7
1,628,271 - Echvi_1411 0.41 -1.0
1,628,271 - Echvi_1411 0.41 +1.2
1,628,280 - Echvi_1411 0.42 -0.4
1,628,291 + Echvi_1411 0.43 +0.2
1,628,354 + Echvi_1411 0.49 -1.0
1,628,354 + Echvi_1411 0.49 +0.6
1,628,460 - Echvi_1411 0.59 -1.8
1,628,474 + Echvi_1411 0.60 -1.1
1,628,475 - Echvi_1411 0.60 +0.5
1,628,480 - Echvi_1411 0.60 +0.2
1,628,480 - Echvi_1411 0.60 +0.5
1,628,484 + Echvi_1411 0.61 -0.7
1,628,484 + Echvi_1411 0.61 +0.3
1,628,485 - Echvi_1411 0.61 +1.2
1,628,487 - Echvi_1411 0.61 -1.5
1,628,520 + Echvi_1411 0.64 -0.3
1,628,520 + Echvi_1411 0.64 -0.2
1,628,520 + Echvi_1411 0.64 +0.1
1,628,521 - Echvi_1411 0.64 +0.3
1,628,522 + Echvi_1411 0.64 +1.0
1,628,523 - Echvi_1411 0.64 +0.5
1,628,648 - Echvi_1411 0.76 -0.2
1,628,690 + Echvi_1411 0.79 +0.2
1,628,719 + Echvi_1411 0.82 +0.7
1,628,720 - Echvi_1411 0.82 +0.4
1,628,720 - Echvi_1411 0.82 +0.4
1,628,720 - Echvi_1411 0.82 +0.1
1,628,720 - Echvi_1411 0.82 +0.0
1,628,726 + Echvi_1411 0.83 +0.2
1,628,727 - Echvi_1411 0.83 -0.5
1,628,785 + Echvi_1411 0.88 -0.1
1,628,794 - Echvi_1411 0.89 -0.3
1,628,794 - Echvi_1411 0.89 +0.3
1,628,847 - -1.1
1,628,850 + +0.3
1,628,851 - -1.0
1,628,855 - -0.0
1,628,883 + -0.9
1,628,884 - -0.6
1,628,884 - -1.8
1,628,886 - +1.0
1,628,914 - +0.5
1,628,922 - +0.7
1,628,922 - -0.7
1,628,940 + -3.0
1,628,941 - -0.2
1,628,942 + -1.8
1,628,942 + +0.3
1,628,942 + +1.2
1,628,943 - +0.9
1,628,943 - -1.3
1,628,943 - +0.7
1,628,943 - +1.6
1,628,943 - +0.6
1,628,943 - +0.2
1,628,943 - +1.1
1,628,943 - -0.5
1,628,944 + -0.5
1,628,944 + -1.4
1,628,944 + -0.6
1,628,944 + -0.6
1,628,945 - +1.7
1,628,945 - -0.2
1,628,945 - +1.8
1,628,946 + -1.2
1,628,946 + +0.3
1,628,947 - -1.0
1,628,947 - +0.6
1,628,986 + -2.4
1,629,032 + Echvi_1412 0.18 -0.2
1,629,032 + Echvi_1412 0.18 -0.3
1,629,032 + Echvi_1412 0.18 -0.4
1,629,033 - Echvi_1412 0.18 +1.3
1,629,033 - Echvi_1412 0.18 +0.0
1,629,035 + Echvi_1412 0.19 -0.8
1,629,056 + Echvi_1412 0.25 +1.4
1,629,057 - Echvi_1412 0.26 +0.1
1,629,105 + Echvi_1412 0.41 +0.4
1,629,105 + Echvi_1412 0.41 -0.0
1,629,108 - Echvi_1412 0.42 +0.0
1,629,108 - Echvi_1412 0.42 -1.2
1,629,108 - Echvi_1412 0.42 +1.0
1,629,108 - Echvi_1412 0.42 +0.9
1,629,111 + Echvi_1412 0.43 +0.7
1,629,213 - Echvi_1412 0.75 +2.1
1,629,216 - Echvi_1412 0.76 +0.4
1,629,224 + Echvi_1412 0.79 +1.1
1,629,225 - Echvi_1412 0.79 +1.2
1,629,263 + -1.6
1,629,263 + -0.1
1,629,280 + -1.0
1,629,281 - +3.0
1,629,281 - -0.3
1,629,289 - -0.3
1,629,315 - +0.2
1,629,315 - +1.1
1,629,323 - +0.4
1,629,328 - +0.1
1,629,337 + +0.4
1,629,439 - Echvi_1413 0.36 +0.1
1,629,439 - Echvi_1413 0.36 +0.3
1,629,439 - Echvi_1413 0.36 +1.0
1,629,538 + Echvi_1413 0.73 -3.1
1,629,538 + Echvi_1413 0.73 -1.3
1,629,539 - Echvi_1413 0.73 +1.6
1,629,573 + Echvi_1413 0.86 +0.6
1,629,640 - +0.0
1,629,680 + -1.5
1,629,681 - +0.6
1,629,681 - -1.7
1,629,681 - +0.3
1,629,692 + +0.6
1,629,693 - +0.1
1,629,708 + -0.6
1,629,708 + -0.9
1,629,711 + -0.9
1,629,711 + +0.9
1,629,777 + Echvi_1414 0.12 -0.5
1,629,777 + Echvi_1414 0.12 +1.4
1,629,778 - Echvi_1414 0.12 -2.7
1,629,804 + Echvi_1414 0.15 -1.7
1,629,805 - Echvi_1414 0.15 -1.1
1,629,805 - Echvi_1414 0.15 +0.7
1,629,828 + Echvi_1414 0.18 +1.2
1,629,828 + Echvi_1414 0.18 +0.6
1,629,829 - Echvi_1414 0.18 -1.0
1,629,829 - Echvi_1414 0.18 +0.8
1,629,830 + Echvi_1414 0.18 -0.3
1,629,830 + Echvi_1414 0.18 +0.8
1,629,830 + Echvi_1414 0.18 -0.5
1,629,830 + Echvi_1414 0.18 -0.9
1,629,831 - Echvi_1414 0.18 +0.1
1,629,861 + Echvi_1414 0.22 +0.2
1,629,862 - Echvi_1414 0.22 -0.3
1,629,883 + Echvi_1414 0.24 -0.4
1,629,884 - Echvi_1414 0.25 +0.8
1,629,984 - Echvi_1414 0.37 +0.7
1,630,088 - Echvi_1414 0.49 +2.7
1,630,163 + Echvi_1414 0.58 +0.9
1,630,163 + Echvi_1414 0.58 -0.9
1,630,199 + Echvi_1414 0.63 -0.7
1,630,199 + Echvi_1414 0.63 -1.2
1,630,203 - Echvi_1414 0.63 -0.4
1,630,203 - Echvi_1414 0.63 +0.1
1,630,218 - Echvi_1414 0.65 -1.3
1,630,252 + Echvi_1414 0.69 -0.7
1,630,253 - Echvi_1414 0.69 +0.0

Or see this region's nucleotide sequence