Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0967 and Echvi_0968 are separated by 340 nucleotides Echvi_0968 and Echvi_0969 are separated by 214 nucleotides
Echvi_0967: Echvi_0967 - hypothetical protein, at 1,118,486 to 1,119,934
_0967
Echvi_0968: Echvi_0968 - deoxyguanosinetriphosphate triphosphohydrolase, putative, at 1,120,275 to 1,121,618
_0968
Echvi_0969: Echvi_0969 - Domain of unknown function (DUF1083)., at 1,121,833 to 1,122,897
_0969
Position (kb)
1120
1121
1122 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1119.302 kb on - strand, within Echvi_0967 at 1119.486 kb on + strand, within Echvi_0967 at 1119.566 kb on + strand, within Echvi_0967 at 1119.566 kb on + strand, within Echvi_0967 at 1119.571 kb on + strand, within Echvi_0967 at 1119.573 kb on + strand, within Echvi_0967 at 1119.573 kb on + strand, within Echvi_0967 at 1119.573 kb on + strand, within Echvi_0967 at 1119.574 kb on - strand, within Echvi_0967 at 1119.574 kb on - strand, within Echvi_0967 at 1119.574 kb on - strand, within Echvi_0967 at 1119.585 kb on - strand, within Echvi_0967 at 1119.592 kb on + strand, within Echvi_0967 at 1119.627 kb on + strand, within Echvi_0967 at 1119.641 kb on - strand, within Echvi_0967 at 1119.708 kb on + strand, within Echvi_0967 at 1119.753 kb on - strand, within Echvi_0967 at 1119.757 kb on + strand, within Echvi_0967 at 1119.757 kb on + strand, within Echvi_0967 at 1119.759 kb on + strand, within Echvi_0967 at 1119.796 kb on + strand at 1119.797 kb on - strand at 1119.850 kb on + strand at 1119.850 kb on + strand at 1119.851 kb on - strand at 1119.857 kb on - strand at 1119.857 kb on - strand at 1119.868 kb on + strand at 1119.947 kb on + strand at 1119.974 kb on - strand at 1120.176 kb on + strand at 1120.177 kb on - strand at 1120.235 kb on - strand at 1120.327 kb on + strand at 1120.327 kb on + strand at 1120.327 kb on + strand at 1120.327 kb on + strand at 1120.328 kb on - strand at 1120.328 kb on - strand at 1120.328 kb on - strand at 1120.331 kb on + strand at 1120.331 kb on + strand at 1120.331 kb on + strand at 1120.331 kb on + strand at 1120.332 kb on - strand at 1120.420 kb on - strand, within Echvi_0968 at 1120.471 kb on + strand, within Echvi_0968 at 1120.472 kb on - strand, within Echvi_0968 at 1120.478 kb on + strand, within Echvi_0968 at 1120.479 kb on - strand, within Echvi_0968 at 1120.481 kb on - strand, within Echvi_0968 at 1120.566 kb on + strand, within Echvi_0968 at 1120.566 kb on + strand, within Echvi_0968 at 1120.619 kb on + strand, within Echvi_0968 at 1120.620 kb on - strand, within Echvi_0968 at 1120.620 kb on - strand, within Echvi_0968 at 1120.726 kb on - strand, within Echvi_0968 at 1120.726 kb on - strand, within Echvi_0968 at 1120.769 kb on + strand, within Echvi_0968 at 1120.770 kb on - strand, within Echvi_0968 at 1120.770 kb on - strand, within Echvi_0968 at 1120.844 kb on + strand, within Echvi_0968 at 1120.845 kb on - strand, within Echvi_0968 at 1120.845 kb on - strand, within Echvi_0968 at 1120.845 kb on - strand, within Echvi_0968 at 1120.871 kb on + strand, within Echvi_0968 at 1120.871 kb on + strand, within Echvi_0968 at 1120.871 kb on + strand, within Echvi_0968 at 1120.871 kb on + strand, within Echvi_0968 at 1120.872 kb on - strand, within Echvi_0968 at 1120.873 kb on + strand, within Echvi_0968 at 1120.954 kb on - strand, within Echvi_0968 at 1120.984 kb on - strand, within Echvi_0968 at 1121.018 kb on + strand, within Echvi_0968 at 1121.069 kb on + strand, within Echvi_0968 at 1121.084 kb on + strand, within Echvi_0968 at 1121.084 kb on + strand, within Echvi_0968 at 1121.084 kb on + strand, within Echvi_0968 at 1121.085 kb on - strand, within Echvi_0968 at 1121.085 kb on - strand, within Echvi_0968 at 1121.090 kb on - strand, within Echvi_0968 at 1121.316 kb on - strand, within Echvi_0968 at 1121.369 kb on - strand, within Echvi_0968 at 1121.521 kb on + strand at 1121.598 kb on + strand at 1121.598 kb on + strand at 1121.645 kb on - strand at 1121.658 kb on + strand at 1121.658 kb on + strand at 1121.658 kb on + strand at 1121.659 kb on - strand at 1121.659 kb on - strand at 1121.659 kb on - strand at 1121.898 kb on + strand at 1121.915 kb on - strand at 1121.919 kb on + strand at 1121.919 kb on + strand at 1121.920 kb on - strand at 1121.920 kb on - strand at 1121.924 kb on - strand at 1122.124 kb on + strand, within Echvi_0969 at 1122.124 kb on + strand, within Echvi_0969 at 1122.124 kb on + strand, within Echvi_0969 at 1122.125 kb on - strand at 1122.125 kb on - strand, within Echvi_0969 at 1122.125 kb on - strand, within Echvi_0969 at 1122.126 kb on + strand, within Echvi_0969 at 1122.126 kb on + strand, within Echvi_0969 at 1122.170 kb on + strand, within Echvi_0969 at 1122.192 kb on + strand at 1122.202 kb on + strand, within Echvi_0969 at 1122.203 kb on - strand, within Echvi_0969 at 1122.203 kb on - strand, within Echvi_0969 at 1122.203 kb on - strand, within Echvi_0969 at 1122.203 kb on - strand, within Echvi_0969 at 1122.205 kb on + strand, within Echvi_0969 at 1122.205 kb on + strand, within Echvi_0969 at 1122.205 kb on + strand, within Echvi_0969 at 1122.255 kb on + strand, within Echvi_0969 at 1122.256 kb on - strand, within Echvi_0969 at 1122.256 kb on - strand, within Echvi_0969 at 1122.333 kb on + strand, within Echvi_0969 at 1122.333 kb on + strand, within Echvi_0969 at 1122.334 kb on - strand, within Echvi_0969 at 1122.349 kb on - strand, within Echvi_0969 at 1122.422 kb on - strand, within Echvi_0969 at 1122.502 kb on + strand, within Echvi_0969 at 1122.506 kb on + strand, within Echvi_0969 at 1122.507 kb on - strand, within Echvi_0969 at 1122.507 kb on - strand, within Echvi_0969 at 1122.548 kb on - strand, within Echvi_0969 at 1122.580 kb on - strand, within Echvi_0969 at 1122.580 kb on - strand, within Echvi_0969
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,119,302 - Echvi_0967 0.56 -1.4 1,119,486 + Echvi_0967 0.69 -1.1 1,119,566 + Echvi_0967 0.75 -0.3 1,119,566 + Echvi_0967 0.75 -1.0 1,119,571 + Echvi_0967 0.75 +0.7 1,119,573 + Echvi_0967 0.75 +1.2 1,119,573 + Echvi_0967 0.75 -0.3 1,119,573 + Echvi_0967 0.75 +0.5 1,119,574 - Echvi_0967 0.75 -2.1 1,119,574 - Echvi_0967 0.75 +0.5 1,119,574 - Echvi_0967 0.75 +2.4 1,119,585 - Echvi_0967 0.76 +0.4 1,119,592 + Echvi_0967 0.76 -1.2 1,119,627 + Echvi_0967 0.79 +0.4 1,119,641 - Echvi_0967 0.80 -1.5 1,119,708 + Echvi_0967 0.84 -1.4 1,119,753 - Echvi_0967 0.87 -0.4 1,119,757 + Echvi_0967 0.88 +0.2 1,119,757 + Echvi_0967 0.88 +0.2 1,119,759 + Echvi_0967 0.88 -0.5 1,119,796 + -1.7 1,119,797 - -0.0 1,119,850 + -0.6 1,119,850 + +0.3 1,119,851 - -1.3 1,119,857 - -2.7 1,119,857 - +1.3 1,119,868 + +0.7 1,119,947 + -0.7 1,119,974 - -0.5 1,120,176 + -1.8 1,120,177 - -2.1 1,120,235 - +1.0 1,120,327 + +0.6 1,120,327 + +0.1 1,120,327 + -0.5 1,120,327 + -0.9 1,120,328 - -0.5 1,120,328 - -2.1 1,120,328 - -0.8 1,120,331 + +0.0 1,120,331 + +0.7 1,120,331 + -0.2 1,120,331 + -0.1 1,120,332 - +0.8 1,120,420 - Echvi_0968 0.11 -1.0 1,120,471 + Echvi_0968 0.15 -0.2 1,120,472 - Echvi_0968 0.15 -1.1 1,120,478 + Echvi_0968 0.15 +0.0 1,120,479 - Echvi_0968 0.15 -1.8 1,120,481 - Echvi_0968 0.15 -0.5 1,120,566 + Echvi_0968 0.22 -0.0 1,120,566 + Echvi_0968 0.22 +1.5 1,120,619 + Echvi_0968 0.26 +0.4 1,120,620 - Echvi_0968 0.26 +0.6 1,120,620 - Echvi_0968 0.26 +1.8 1,120,726 - Echvi_0968 0.34 -0.9 1,120,726 - Echvi_0968 0.34 -0.3 1,120,769 + Echvi_0968 0.37 -1.0 1,120,770 - Echvi_0968 0.37 -1.5 1,120,770 - Echvi_0968 0.37 +1.4 1,120,844 + Echvi_0968 0.42 +0.6 1,120,845 - Echvi_0968 0.42 -2.0 1,120,845 - Echvi_0968 0.42 +0.4 1,120,845 - Echvi_0968 0.42 -0.6 1,120,871 + Echvi_0968 0.44 -0.6 1,120,871 + Echvi_0968 0.44 -1.4 1,120,871 + Echvi_0968 0.44 -0.6 1,120,871 + Echvi_0968 0.44 +0.1 1,120,872 - Echvi_0968 0.44 +3.2 1,120,873 + Echvi_0968 0.44 -1.4 1,120,954 - Echvi_0968 0.51 -0.9 1,120,984 - Echvi_0968 0.53 -0.6 1,121,018 + Echvi_0968 0.55 -0.2 1,121,069 + Echvi_0968 0.59 -0.3 1,121,084 + Echvi_0968 0.60 -2.2 1,121,084 + Echvi_0968 0.60 +0.5 1,121,084 + Echvi_0968 0.60 -0.3 1,121,085 - Echvi_0968 0.60 -2.1 1,121,085 - Echvi_0968 0.60 -0.4 1,121,090 - Echvi_0968 0.61 -0.2 1,121,316 - Echvi_0968 0.77 +0.5 1,121,369 - Echvi_0968 0.81 -0.9 1,121,521 + -0.1 1,121,598 + +0.8 1,121,598 + +1.4 1,121,645 - +1.2 1,121,658 + +1.6 1,121,658 + +0.2 1,121,658 + +0.2 1,121,659 - -0.0 1,121,659 - +0.4 1,121,659 - -0.8 1,121,898 + -0.4 1,121,915 - +1.2 1,121,919 + -0.5 1,121,919 + +1.1 1,121,920 - -0.0 1,121,920 - -0.4 1,121,924 - +0.3 1,122,124 + Echvi_0969 0.27 -3.7 1,122,124 + Echvi_0969 0.27 -0.2 1,122,124 + Echvi_0969 0.27 -0.5 1,122,125 - +2.2 1,122,125 - Echvi_0969 0.27 -0.9 1,122,125 - Echvi_0969 0.27 -1.0 1,122,126 + Echvi_0969 0.28 -0.2 1,122,126 + Echvi_0969 0.28 -0.5 1,122,170 + Echvi_0969 0.32 +0.3 1,122,192 + +3.5 1,122,202 + Echvi_0969 0.35 +1.1 1,122,203 - Echvi_0969 0.35 +1.6 1,122,203 - Echvi_0969 0.35 +1.2 1,122,203 - Echvi_0969 0.35 -0.1 1,122,203 - Echvi_0969 0.35 -0.4 1,122,205 + Echvi_0969 0.35 -0.3 1,122,205 + Echvi_0969 0.35 -0.0 1,122,205 + Echvi_0969 0.35 +1.4 1,122,255 + Echvi_0969 0.40 -0.3 1,122,256 - Echvi_0969 0.40 -1.0 1,122,256 - Echvi_0969 0.40 -0.0 1,122,333 + Echvi_0969 0.47 +0.1 1,122,333 + Echvi_0969 0.47 +1.0 1,122,334 - Echvi_0969 0.47 -0.2 1,122,349 - Echvi_0969 0.48 -1.1 1,122,422 - Echvi_0969 0.55 -1.3 1,122,502 + Echvi_0969 0.63 +0.5 1,122,506 + Echvi_0969 0.63 +0.3 1,122,507 - Echvi_0969 0.63 -1.9 1,122,507 - Echvi_0969 0.63 -0.8 1,122,548 - Echvi_0969 0.67 +2.2 1,122,580 - Echvi_0969 0.70 -0.1 1,122,580 - Echvi_0969 0.70 -0.6
Or see this region's nucleotide sequence