Strain Fitness in Escherichia coli BW25113 around b2845
Experiment: deuterated glucose in H2O
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | deuterated glucose in H2O |
---|---|---|---|---|---|
remove | |||||
2,982,884 | - | yqeF | b2844 | 0.38 | -2.1 |
2,982,928 | + | yqeF | b2844 | 0.42 | -0.5 |
2,983,088 | + | yqeF | b2844 | 0.55 | -0.5 |
2,983,157 | - | yqeF | b2844 | 0.61 | +0.9 |
2,983,176 | - | yqeF | b2844 | 0.63 | +0.2 |
2,983,215 | + | yqeF | b2844 | 0.66 | +0.2 |
2,983,215 | + | yqeF | b2844 | 0.66 | -0.3 |
2,983,226 | - | yqeF | b2844 | 0.67 | -1.2 |
2,983,246 | - | yqeF | b2844 | 0.69 | -1.8 |
2,983,246 | - | yqeF | b2844 | 0.69 | -0.9 |
2,983,306 | + | yqeF | b2844 | 0.74 | +0.2 |
2,983,306 | + | yqeF | b2844 | 0.74 | -2.0 |
2,983,311 | - | yqeF | b2844 | 0.74 | -0.0 |
2,983,316 | - | yqeF | b2844 | 0.75 | +0.3 |
2,983,362 | - | yqeF | b2844 | 0.79 | +2.0 |
2,983,362 | - | yqeF | b2844 | 0.79 | +1.3 |
2,983,450 | - | yqeF | b2844 | 0.86 | +0.4 |
2,983,617 | - | +0.2 | |||
2,983,617 | - | -0.0 | |||
2,983,739 | - | -0.3 | |||
2,983,743 | - | +0.1 | |||
2,983,765 | + | +1.1 | |||
2,983,773 | - | +0.7 | |||
2,983,787 | - | -0.7 | |||
2,983,787 | - | +1.0 | |||
2,983,791 | - | +0.2 | |||
2,983,797 | + | +0.2 | |||
2,983,797 | + | +2.6 | |||
2,983,807 | - | -0.3 | |||
2,983,914 | + | -0.1 | |||
2,983,916 | + | -0.7 | |||
2,983,922 | - | -0.6 | |||
2,983,924 | - | -0.9 | |||
2,983,926 | + | +0.2 | |||
2,983,926 | + | -0.2 | |||
2,983,946 | + | -2.1 | |||
2,983,946 | - | -0.4 | |||
2,983,946 | - | -0.5 | |||
2,983,961 | + | -0.0 | |||
2,983,975 | + | -0.7 | |||
2,983,978 | + | -0.1 | |||
2,983,988 | + | -0.7 | |||
2,983,988 | + | -0.3 | |||
2,984,020 | + | yqeG | b2845 | 0.12 | -1.3 |
2,984,020 | + | yqeG | b2845 | 0.12 | +0.2 |
2,984,065 | - | yqeG | b2845 | 0.16 | -2.0 |
2,984,065 | - | yqeG | b2845 | 0.16 | -0.4 |
2,984,077 | + | yqeG | b2845 | 0.17 | +1.0 |
2,984,077 | + | yqeG | b2845 | 0.17 | +0.2 |
2,984,097 | + | yqeG | b2845 | 0.19 | -0.1 |
2,984,097 | + | yqeG | b2845 | 0.19 | -0.3 |
2,984,100 | + | yqeG | b2845 | 0.19 | -0.4 |
2,984,105 | + | yqeG | b2845 | 0.19 | -0.4 |
2,984,105 | + | yqeG | b2845 | 0.19 | -0.5 |
2,984,115 | - | yqeG | b2845 | 0.20 | -1.0 |
2,984,115 | - | yqeG | b2845 | 0.20 | -1.4 |
2,984,115 | - | yqeG | b2845 | 0.20 | +0.3 |
2,984,122 | + | yqeG | b2845 | 0.21 | -1.3 |
2,984,141 | + | yqeG | b2845 | 0.22 | +1.2 |
2,984,152 | - | yqeG | b2845 | 0.23 | +0.3 |
2,984,169 | + | yqeG | b2845 | 0.24 | -0.8 |
2,984,174 | + | yqeG | b2845 | 0.25 | +1.0 |
2,984,174 | + | yqeG | b2845 | 0.25 | -0.9 |
2,984,174 | + | yqeG | b2845 | 0.25 | +2.6 |
2,984,177 | - | yqeG | b2845 | 0.25 | -1.9 |
2,984,179 | + | yqeG | b2845 | 0.25 | -0.2 |
2,984,179 | + | yqeG | b2845 | 0.25 | -1.8 |
2,984,221 | + | yqeG | b2845 | 0.29 | -0.8 |
2,984,221 | - | yqeG | b2845 | 0.29 | +0.7 |
2,984,222 | + | yqeG | b2845 | 0.29 | -1.2 |
2,984,233 | + | yqeG | b2845 | 0.30 | -0.2 |
2,984,245 | + | yqeG | b2845 | 0.31 | +0.2 |
2,984,245 | + | yqeG | b2845 | 0.31 | -1.2 |
2,984,245 | + | yqeG | b2845 | 0.31 | -0.2 |
2,984,248 | + | yqeG | b2845 | 0.31 | +1.0 |
2,984,248 | + | yqeG | b2845 | 0.31 | +0.3 |
2,984,260 | + | yqeG | b2845 | 0.32 | -0.2 |
2,984,260 | + | yqeG | b2845 | 0.32 | -0.4 |
2,984,260 | + | yqeG | b2845 | 0.32 | -0.8 |
2,984,260 | + | yqeG | b2845 | 0.32 | -0.7 |
2,984,260 | + | yqeG | b2845 | 0.32 | -0.0 |
2,984,260 | + | yqeG | b2845 | 0.32 | +0.2 |
2,984,260 | + | yqeG | b2845 | 0.32 | +0.8 |
2,984,260 | + | yqeG | b2845 | 0.32 | -0.1 |
2,984,260 | + | yqeG | b2845 | 0.32 | -0.2 |
2,984,260 | + | yqeG | b2845 | 0.32 | -0.3 |
2,984,264 | + | yqeG | b2845 | 0.32 | +1.1 |
2,984,268 | - | yqeG | b2845 | 0.32 | +0.3 |
2,984,268 | - | yqeG | b2845 | 0.32 | +0.9 |
2,984,304 | + | yqeG | b2845 | 0.35 | +1.6 |
2,984,305 | + | yqeG | b2845 | 0.35 | -0.2 |
2,984,306 | + | yqeG | b2845 | 0.36 | -1.7 |
2,984,306 | + | yqeG | b2845 | 0.36 | +0.8 |
2,984,306 | + | yqeG | b2845 | 0.36 | -1.2 |
2,984,347 | - | yqeG | b2845 | 0.39 | +0.8 |
2,984,398 | + | yqeG | b2845 | 0.43 | +1.3 |
2,984,412 | + | yqeG | b2845 | 0.44 | -0.8 |
2,984,412 | + | yqeG | b2845 | 0.44 | +0.5 |
2,984,413 | + | yqeG | b2845 | 0.44 | -0.3 |
2,984,413 | - | yqeG | b2845 | 0.44 | -0.7 |
2,984,424 | - | yqeG | b2845 | 0.45 | -0.1 |
2,984,430 | - | yqeG | b2845 | 0.46 | +1.4 |
2,984,451 | - | yqeG | b2845 | 0.47 | -0.5 |
2,984,479 | + | yqeG | b2845 | 0.50 | +0.9 |
2,984,511 | + | yqeG | b2845 | 0.52 | +1.0 |
2,984,511 | + | yqeG | b2845 | 0.52 | +0.1 |
2,984,530 | + | yqeG | b2845 | 0.54 | -0.4 |
2,984,547 | + | yqeG | b2845 | 0.55 | +0.9 |
2,984,547 | + | yqeG | b2845 | 0.55 | +0.3 |
2,984,585 | - | yqeG | b2845 | 0.58 | -0.8 |
2,984,585 | - | yqeG | b2845 | 0.58 | +1.1 |
2,984,591 | + | yqeG | b2845 | 0.59 | -1.4 |
2,984,591 | + | yqeG | b2845 | 0.59 | +0.0 |
2,984,599 | - | yqeG | b2845 | 0.59 | -1.6 |
2,984,599 | - | yqeG | b2845 | 0.59 | -0.5 |
2,984,599 | - | yqeG | b2845 | 0.59 | +0.3 |
2,984,599 | - | yqeG | b2845 | 0.59 | +0.4 |
2,984,607 | - | yqeG | b2845 | 0.60 | -1.2 |
2,984,607 | - | yqeG | b2845 | 0.60 | -0.1 |
2,984,607 | - | yqeG | b2845 | 0.60 | +1.2 |
2,984,613 | + | yqeG | b2845 | 0.60 | +0.2 |
2,984,613 | + | yqeG | b2845 | 0.60 | +1.0 |
2,984,621 | - | yqeG | b2845 | 0.61 | +0.3 |
2,984,621 | - | yqeG | b2845 | 0.61 | +0.5 |
2,984,627 | + | yqeG | b2845 | 0.62 | -0.3 |
2,984,650 | - | yqeG | b2845 | 0.63 | +1.2 |
2,984,681 | + | yqeG | b2845 | 0.66 | -0.2 |
2,984,681 | + | yqeG | b2845 | 0.66 | +1.1 |
2,984,691 | + | yqeG | b2845 | 0.67 | +1.2 |
2,984,692 | + | yqeG | b2845 | 0.67 | +2.6 |
2,984,692 | + | yqeG | b2845 | 0.67 | +0.7 |
2,984,692 | + | yqeG | b2845 | 0.67 | -2.3 |
2,984,692 | + | yqeG | b2845 | 0.67 | -0.1 |
2,984,700 | - | yqeG | b2845 | 0.68 | -1.8 |
2,984,722 | + | yqeG | b2845 | 0.69 | -1.7 |
2,984,776 | + | yqeG | b2845 | 0.74 | +0.0 |
2,984,791 | + | yqeG | b2845 | 0.75 | -0.3 |
2,984,791 | + | yqeG | b2845 | 0.75 | -0.0 |
2,984,793 | + | yqeG | b2845 | 0.75 | -0.5 |
2,984,800 | + | yqeG | b2845 | 0.76 | +0.7 |
2,984,803 | + | yqeG | b2845 | 0.76 | +0.5 |
2,984,810 | - | yqeG | b2845 | 0.77 | +0.7 |
2,984,826 | + | yqeG | b2845 | 0.78 | +0.5 |
2,984,832 | - | yqeG | b2845 | 0.78 | -0.1 |
2,984,836 | - | yqeG | b2845 | 0.79 | -1.6 |
2,984,839 | + | yqeG | b2845 | 0.79 | +1.0 |
2,984,839 | + | yqeG | b2845 | 0.79 | -0.4 |
2,984,871 | + | yqeG | b2845 | 0.81 | -0.6 |
2,984,873 | + | yqeG | b2845 | 0.82 | +1.1 |
2,984,873 | + | yqeG | b2845 | 0.82 | +0.0 |
2,984,879 | - | yqeG | b2845 | 0.82 | +0.2 |
2,984,879 | - | yqeG | b2845 | 0.82 | -0.8 |
2,984,885 | + | yqeG | b2845 | 0.83 | -0.1 |
2,984,907 | + | yqeG | b2845 | 0.84 | +1.3 |
2,984,909 | + | yqeG | b2845 | 0.85 | -2.2 |
2,984,914 | + | yqeG | b2845 | 0.85 | +1.0 |
2,984,914 | + | yqeG | b2845 | 0.85 | +1.3 |
2,984,914 | + | yqeG | b2845 | 0.85 | -0.1 |
2,984,914 | + | yqeG | b2845 | 0.85 | +1.1 |
2,984,922 | - | yqeG | b2845 | 0.86 | -0.2 |
2,984,941 | + | yqeG | b2845 | 0.87 | -1.0 |
2,984,941 | + | yqeG | b2845 | 0.87 | -1.1 |
2,984,941 | + | yqeG | b2845 | 0.87 | -1.5 |
2,984,947 | - | yqeG | b2845 | 0.88 | +0.3 |
2,984,950 | + | yqeG | b2845 | 0.88 | -0.0 |
2,984,960 | + | yqeG | b2845 | 0.89 | -1.0 |
2,984,963 | + | yqeG | b2845 | 0.89 | +0.5 |
2,984,963 | + | yqeG | b2845 | 0.89 | +0.0 |
2,984,968 | - | yqeG | b2845 | 0.89 | -0.2 |
2,984,968 | - | yqeG | b2845 | 0.89 | +2.6 |
2,984,986 | + | -0.9 | |||
2,984,994 | + | +0.3 | |||
2,984,994 | - | +0.7 | |||
2,984,994 | - | +0.7 | |||
2,984,994 | - | -1.8 | |||
2,984,996 | + | -0.1 | |||
2,984,996 | - | +1.0 | |||
2,984,998 | + | -0.3 | |||
2,984,998 | + | -1.3 | |||
2,984,998 | + | -0.0 | |||
2,984,998 | + | +0.7 | |||
2,985,000 | + | -0.1 | |||
2,985,000 | + | -0.8 | |||
2,985,000 | + | +0.9 | |||
2,985,001 | - | -0.2 | |||
2,985,001 | - | +0.8 | |||
2,985,002 | - | -1.0 | |||
2,985,002 | - | +0.5 | |||
2,985,007 | - | -1.2 | |||
2,985,007 | - | -1.0 | |||
2,985,008 | - | -1.2 | |||
2,985,008 | - | -0.4 | |||
2,985,010 | + | -0.2 | |||
2,985,010 | + | +0.7 | |||
2,985,017 | + | +0.2 | |||
2,985,017 | + | -1.1 | |||
2,985,023 | + | +0.3 | |||
2,985,025 | - | -3.1 | |||
2,985,056 | + | +0.2 | |||
2,985,056 | + | +0.9 | |||
2,985,056 | + | +0.2 | |||
2,985,056 | + | +0.3 | |||
2,985,056 | + | +0.8 | |||
2,985,057 | + | -0.3 | |||
2,985,057 | + | +0.8 | |||
2,985,061 | + | -0.5 | |||
2,985,061 | + | -1.0 | |||
2,985,061 | + | -0.8 | |||
2,985,064 | - | -2.0 | |||
2,985,066 | + | -1.1 | |||
2,985,066 | + | -0.1 | |||
2,985,066 | + | +0.0 | |||
2,985,066 | + | -0.5 | |||
2,985,066 | + | -0.5 | |||
2,985,066 | + | +2.6 | |||
2,985,066 | + | +2.6 | |||
2,985,067 | + | +1.6 | |||
2,985,067 | + | -1.7 | |||
2,985,067 | + | -0.4 | |||
2,985,071 | + | -1.1 | |||
2,985,071 | + | -1.7 | |||
2,985,074 | - | -0.9 | |||
2,985,074 | - | -0.0 | |||
2,985,084 | + | +0.4 | |||
2,985,215 | + | -0.8 | |||
2,985,243 | + | +0.8 | |||
2,985,257 | + | -1.5 | |||
2,985,285 | + | +0.6 | |||
2,985,285 | + | +1.1 | |||
2,985,326 | + | +1.1 | |||
2,985,356 | + | +0.1 | |||
2,985,356 | + | -0.8 | |||
2,985,356 | + | +0.6 | |||
2,985,356 | + | -1.3 | |||
2,985,357 | + | -2.0 | |||
2,985,364 | - | -1.8 | |||
2,985,575 | + | +0.1 | |||
2,985,829 | + | yqeH | b2846 | 0.43 | -2.4 |
2,985,916 | + | yqeH | b2846 | 0.57 | -0.6 |
Or see this region's nucleotide sequence