Experiment: deuterated glucose in H2O
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt nrdE and nrdF are separated by 9 nucleotides nrdF and proV are separated by 353 nucleotides
b2675: nrdE - ribonucleotide-diphosphate reductase alpha subunit (NCBI), at 2,799,370 to 2,801,514
nrdE
b2676: nrdF - ribonucleotide-diphosphate reductase beta subunit (NCBI), at 2,801,524 to 2,802,483
nrdF
b2677: proV - glycine betaine transporter subunit (NCBI), at 2,802,837 to 2,804,039
proV
Position (kb)
2801
2802
2803 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2800.670 kb on + strand, within nrdE at 2800.699 kb on - strand, within nrdE at 2800.699 kb on - strand, within nrdE at 2800.710 kb on - strand, within nrdE at 2800.719 kb on + strand, within nrdE at 2800.796 kb on + strand, within nrdE at 2800.826 kb on - strand, within nrdE at 2800.853 kb on + strand, within nrdE at 2800.877 kb on + strand, within nrdE at 2800.877 kb on + strand, within nrdE at 2800.877 kb on + strand, within nrdE at 2800.887 kb on + strand, within nrdE at 2800.944 kb on + strand, within nrdE at 2800.944 kb on + strand, within nrdE at 2801.039 kb on + strand, within nrdE at 2801.098 kb on + strand, within nrdE at 2801.116 kb on - strand, within nrdE at 2801.138 kb on + strand, within nrdE at 2801.138 kb on + strand, within nrdE at 2801.145 kb on + strand, within nrdE at 2801.146 kb on - strand, within nrdE at 2801.167 kb on - strand, within nrdE at 2801.226 kb on + strand, within nrdE at 2801.234 kb on + strand, within nrdE at 2801.235 kb on - strand, within nrdE at 2801.247 kb on - strand, within nrdE at 2801.247 kb on - strand, within nrdE at 2801.320 kb on + strand at 2801.421 kb on + strand at 2801.421 kb on + strand at 2801.421 kb on + strand at 2801.472 kb on + strand at 2801.480 kb on - strand at 2801.548 kb on + strand at 2801.548 kb on + strand at 2801.561 kb on + strand at 2801.587 kb on - strand at 2801.587 kb on - strand at 2801.604 kb on - strand at 2801.777 kb on + strand, within nrdF at 2801.777 kb on + strand, within nrdF at 2801.829 kb on - strand, within nrdF at 2801.895 kb on - strand, within nrdF at 2801.895 kb on - strand, within nrdF at 2802.009 kb on - strand, within nrdF at 2802.073 kb on - strand, within nrdF at 2802.119 kb on - strand, within nrdF at 2802.216 kb on - strand, within nrdF at 2802.216 kb on - strand, within nrdF at 2802.233 kb on - strand, within nrdF at 2802.293 kb on + strand, within nrdF at 2802.313 kb on + strand, within nrdF at 2802.326 kb on - strand, within nrdF at 2802.326 kb on - strand, within nrdF at 2802.422 kb on - strand at 2802.422 kb on - strand at 2802.424 kb on + strand at 2802.428 kb on + strand at 2802.428 kb on + strand at 2802.428 kb on + strand at 2802.428 kb on + strand at 2802.428 kb on + strand at 2802.431 kb on + strand at 2802.431 kb on + strand at 2802.436 kb on - strand at 2802.438 kb on + strand at 2802.455 kb on + strand at 2802.463 kb on + strand at 2802.463 kb on + strand at 2802.569 kb on + strand at 2802.572 kb on + strand at 2802.575 kb on + strand at 2802.575 kb on + strand at 2802.585 kb on + strand at 2802.585 kb on + strand at 2802.585 kb on + strand at 2802.593 kb on - strand at 2802.717 kb on - strand at 2802.760 kb on - strand at 2802.795 kb on + strand at 2802.797 kb on + strand at 2802.797 kb on + strand at 2802.887 kb on + strand at 2802.964 kb on + strand, within proV at 2802.964 kb on + strand, within proV at 2802.982 kb on - strand, within proV at 2803.013 kb on + strand, within proV at 2803.029 kb on - strand, within proV at 2803.029 kb on - strand, within proV at 2803.044 kb on + strand, within proV at 2803.044 kb on + strand, within proV at 2803.045 kb on + strand, within proV at 2803.061 kb on - strand, within proV at 2803.061 kb on - strand, within proV at 2803.066 kb on + strand, within proV at 2803.075 kb on - strand, within proV at 2803.076 kb on - strand, within proV at 2803.088 kb on + strand, within proV at 2803.089 kb on + strand, within proV at 2803.092 kb on - strand, within proV at 2803.097 kb on - strand, within proV at 2803.097 kb on - strand, within proV at 2803.097 kb on - strand, within proV at 2803.110 kb on - strand, within proV at 2803.117 kb on + strand, within proV at 2803.131 kb on + strand, within proV at 2803.135 kb on + strand, within proV at 2803.136 kb on + strand, within proV at 2803.136 kb on + strand, within proV at 2803.169 kb on + strand, within proV at 2803.170 kb on + strand, within proV at 2803.177 kb on - strand, within proV at 2803.177 kb on - strand, within proV at 2803.177 kb on - strand, within proV at 2803.177 kb on - strand, within proV at 2803.178 kb on - strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.193 kb on + strand, within proV at 2803.199 kb on - strand, within proV at 2803.199 kb on - strand, within proV at 2803.201 kb on - strand, within proV at 2803.203 kb on + strand, within proV at 2803.203 kb on + strand, within proV at 2803.203 kb on + strand, within proV at 2803.206 kb on + strand, within proV at 2803.206 kb on + strand, within proV at 2803.208 kb on + strand, within proV at 2803.211 kb on - strand, within proV at 2803.213 kb on + strand, within proV at 2803.213 kb on + strand, within proV at 2803.213 kb on + strand, within proV at 2803.221 kb on - strand, within proV at 2803.221 kb on - strand, within proV at 2803.223 kb on + strand, within proV at 2803.225 kb on + strand, within proV at 2803.225 kb on + strand, within proV at 2803.233 kb on - strand, within proV at 2803.233 kb on - strand, within proV at 2803.233 kb on - strand, within proV at 2803.272 kb on + strand, within proV at 2803.273 kb on + strand, within proV at 2803.273 kb on + strand, within proV at 2803.273 kb on + strand, within proV at 2803.273 kb on + strand, within proV at 2803.275 kb on + strand, within proV at 2803.281 kb on - strand, within proV at 2803.281 kb on - strand, within proV at 2803.283 kb on + strand, within proV at 2803.283 kb on + strand, within proV at 2803.283 kb on + strand, within proV at 2803.313 kb on + strand, within proV at 2803.318 kb on + strand, within proV at 2803.321 kb on - strand, within proV at 2803.328 kb on + strand, within proV at 2803.328 kb on + strand, within proV at 2803.331 kb on + strand, within proV at 2803.331 kb on + strand, within proV at 2803.331 kb on + strand, within proV at 2803.331 kb on + strand, within proV at 2803.331 kb on + strand, within proV at 2803.333 kb on + strand, within proV at 2803.336 kb on - strand, within proV at 2803.336 kb on - strand, within proV at 2803.336 kb on - strand, within proV at 2803.339 kb on - strand, within proV at 2803.339 kb on - strand, within proV at 2803.339 kb on - strand, within proV at 2803.339 kb on - strand, within proV at 2803.339 kb on - strand, within proV at 2803.343 kb on + strand, within proV at 2803.345 kb on + strand, within proV at 2803.347 kb on - strand, within proV at 2803.347 kb on - strand, within proV at 2803.348 kb on + strand, within proV at 2803.349 kb on - strand, within proV at 2803.349 kb on - strand, within proV at 2803.350 kb on + strand, within proV at 2803.350 kb on + strand, within proV at 2803.350 kb on + strand, within proV at 2803.350 kb on + strand, within proV at 2803.351 kb on + strand, within proV at 2803.351 kb on + strand, within proV at 2803.352 kb on + strand, within proV at 2803.356 kb on + strand, within proV at 2803.362 kb on + strand, within proV at 2803.362 kb on + strand, within proV at 2803.364 kb on - strand, within proV at 2803.366 kb on + strand, within proV at 2803.370 kb on - strand, within proV at 2803.442 kb on + strand, within proV at 2803.442 kb on + strand, within proV at 2803.473 kb on + strand, within proV at 2803.473 kb on + strand, within proV
Per-strain Table
Position Strand Gene LocusTag Fraction deuterated glucose in H2O remove 2,800,670 + nrdE b2675 0.61 +0.7 2,800,699 - nrdE b2675 0.62 -0.1 2,800,699 - nrdE b2675 0.62 -0.6 2,800,710 - nrdE b2675 0.62 +1.1 2,800,719 + nrdE b2675 0.63 +1.2 2,800,796 + nrdE b2675 0.66 +1.0 2,800,826 - nrdE b2675 0.68 -1.3 2,800,853 + nrdE b2675 0.69 -1.5 2,800,877 + nrdE b2675 0.70 +0.7 2,800,877 + nrdE b2675 0.70 +1.2 2,800,877 + nrdE b2675 0.70 -1.3 2,800,887 + nrdE b2675 0.71 +0.6 2,800,944 + nrdE b2675 0.73 +0.4 2,800,944 + nrdE b2675 0.73 +2.5 2,801,039 + nrdE b2675 0.78 +0.5 2,801,098 + nrdE b2675 0.81 -0.8 2,801,116 - nrdE b2675 0.81 -1.3 2,801,138 + nrdE b2675 0.82 +1.5 2,801,138 + nrdE b2675 0.82 -0.7 2,801,145 + nrdE b2675 0.83 -0.7 2,801,146 - nrdE b2675 0.83 -1.1 2,801,167 - nrdE b2675 0.84 +1.0 2,801,226 + nrdE b2675 0.87 +0.2 2,801,234 + nrdE b2675 0.87 -0.2 2,801,235 - nrdE b2675 0.87 -0.6 2,801,247 - nrdE b2675 0.88 +0.0 2,801,247 - nrdE b2675 0.88 -1.7 2,801,320 + +1.5 2,801,421 + -0.3 2,801,421 + +0.7 2,801,421 + +0.2 2,801,472 + -0.4 2,801,480 - -1.0 2,801,548 + +0.3 2,801,548 + +0.7 2,801,561 + -0.5 2,801,587 - +1.5 2,801,587 - -0.1 2,801,604 - -0.4 2,801,777 + nrdF b2676 0.26 -0.1 2,801,777 + nrdF b2676 0.26 -0.9 2,801,829 - nrdF b2676 0.32 -0.4 2,801,895 - nrdF b2676 0.39 -0.2 2,801,895 - nrdF b2676 0.39 +0.8 2,802,009 - nrdF b2676 0.51 +1.3 2,802,073 - nrdF b2676 0.57 +0.7 2,802,119 - nrdF b2676 0.62 -0.5 2,802,216 - nrdF b2676 0.72 -0.0 2,802,216 - nrdF b2676 0.72 -1.3 2,802,233 - nrdF b2676 0.74 +0.4 2,802,293 + nrdF b2676 0.80 +0.2 2,802,313 + nrdF b2676 0.82 +1.2 2,802,326 - nrdF b2676 0.84 +0.6 2,802,326 - nrdF b2676 0.84 -0.5 2,802,422 - -0.1 2,802,422 - +0.0 2,802,424 + -1.1 2,802,428 + +1.3 2,802,428 + +0.8 2,802,428 + -0.9 2,802,428 + -0.9 2,802,428 + -0.9 2,802,431 + +0.2 2,802,431 + -1.1 2,802,436 - -0.3 2,802,438 + +0.1 2,802,455 + -1.6 2,802,463 + -0.7 2,802,463 + -0.1 2,802,569 + -1.3 2,802,572 + +0.9 2,802,575 + -0.5 2,802,575 + +1.1 2,802,585 + +0.7 2,802,585 + +0.8 2,802,585 + -0.4 2,802,593 - -1.4 2,802,717 - -1.8 2,802,760 - -0.6 2,802,795 + +0.2 2,802,797 + -1.1 2,802,797 + +0.7 2,802,887 + +0.9 2,802,964 + proV b2677 0.11 +0.8 2,802,964 + proV b2677 0.11 -0.5 2,802,982 - proV b2677 0.12 +0.2 2,803,013 + proV b2677 0.15 -0.3 2,803,029 - proV b2677 0.16 -0.3 2,803,029 - proV b2677 0.16 +0.3 2,803,044 + proV b2677 0.17 +0.2 2,803,044 + proV b2677 0.17 -0.5 2,803,045 + proV b2677 0.17 -0.3 2,803,061 - proV b2677 0.19 +1.0 2,803,061 - proV b2677 0.19 +1.1 2,803,066 + proV b2677 0.19 +0.9 2,803,075 - proV b2677 0.20 -0.6 2,803,076 - proV b2677 0.20 +1.0 2,803,088 + proV b2677 0.21 -1.6 2,803,089 + proV b2677 0.21 +0.1 2,803,092 - proV b2677 0.21 -2.6 2,803,097 - proV b2677 0.22 +0.4 2,803,097 - proV b2677 0.22 -2.4 2,803,097 - proV b2677 0.22 +0.1 2,803,110 - proV b2677 0.23 -0.6 2,803,117 + proV b2677 0.23 -0.6 2,803,131 + proV b2677 0.24 -0.3 2,803,135 + proV b2677 0.25 -0.1 2,803,136 + proV b2677 0.25 -0.9 2,803,136 + proV b2677 0.25 +1.5 2,803,169 + proV b2677 0.28 -2.7 2,803,170 + proV b2677 0.28 +0.3 2,803,177 - proV b2677 0.28 +1.7 2,803,177 - proV b2677 0.28 +2.5 2,803,177 - proV b2677 0.28 +0.5 2,803,177 - proV b2677 0.28 +0.8 2,803,178 - proV b2677 0.28 -0.5 2,803,193 + proV b2677 0.30 -0.1 2,803,193 + proV b2677 0.30 +1.9 2,803,193 + proV b2677 0.30 +0.2 2,803,193 + proV b2677 0.30 +0.2 2,803,193 + proV b2677 0.30 +1.0 2,803,193 + proV b2677 0.30 -1.4 2,803,193 + proV b2677 0.30 -0.3 2,803,193 + proV b2677 0.30 +1.5 2,803,199 - proV b2677 0.30 +0.8 2,803,199 - proV b2677 0.30 +1.2 2,803,201 - proV b2677 0.30 +0.4 2,803,203 + proV b2677 0.30 +0.2 2,803,203 + proV b2677 0.30 +0.4 2,803,203 + proV b2677 0.30 +0.8 2,803,206 + proV b2677 0.31 -0.6 2,803,206 + proV b2677 0.31 +0.8 2,803,208 + proV b2677 0.31 +0.5 2,803,211 - proV b2677 0.31 -0.3 2,803,213 + proV b2677 0.31 -0.9 2,803,213 + proV b2677 0.31 -0.3 2,803,213 + proV b2677 0.31 -0.6 2,803,221 - proV b2677 0.32 -0.1 2,803,221 - proV b2677 0.32 +0.2 2,803,223 + proV b2677 0.32 +0.6 2,803,225 + proV b2677 0.32 +2.5 2,803,225 + proV b2677 0.32 -1.0 2,803,233 - proV b2677 0.33 -1.6 2,803,233 - proV b2677 0.33 +0.5 2,803,233 - proV b2677 0.33 +1.2 2,803,272 + proV b2677 0.36 -0.9 2,803,273 + proV b2677 0.36 -0.4 2,803,273 + proV b2677 0.36 +0.3 2,803,273 + proV b2677 0.36 -0.5 2,803,273 + proV b2677 0.36 +0.6 2,803,275 + proV b2677 0.36 +0.3 2,803,281 - proV b2677 0.37 +0.8 2,803,281 - proV b2677 0.37 +0.1 2,803,283 + proV b2677 0.37 -0.3 2,803,283 + proV b2677 0.37 +0.7 2,803,283 + proV b2677 0.37 +1.4 2,803,313 + proV b2677 0.40 -0.4 2,803,318 + proV b2677 0.40 +0.4 2,803,321 - proV b2677 0.40 -0.0 2,803,328 + proV b2677 0.41 +0.5 2,803,328 + proV b2677 0.41 +0.7 2,803,331 + proV b2677 0.41 -1.4 2,803,331 + proV b2677 0.41 +1.2 2,803,331 + proV b2677 0.41 +1.6 2,803,331 + proV b2677 0.41 -0.9 2,803,331 + proV b2677 0.41 -0.3 2,803,333 + proV b2677 0.41 +0.5 2,803,336 - proV b2677 0.41 +0.5 2,803,336 - proV b2677 0.41 -0.4 2,803,336 - proV b2677 0.41 +0.6 2,803,339 - proV b2677 0.42 +1.3 2,803,339 - proV b2677 0.42 +0.5 2,803,339 - proV b2677 0.42 +0.6 2,803,339 - proV b2677 0.42 +0.2 2,803,339 - proV b2677 0.42 -0.6 2,803,343 + proV b2677 0.42 +0.3 2,803,345 + proV b2677 0.42 -0.6 2,803,347 - proV b2677 0.42 -1.6 2,803,347 - proV b2677 0.42 -1.6 2,803,348 + proV b2677 0.42 +0.1 2,803,349 - proV b2677 0.43 +0.4 2,803,349 - proV b2677 0.43 +0.3 2,803,350 + proV b2677 0.43 -0.2 2,803,350 + proV b2677 0.43 -0.6 2,803,350 + proV b2677 0.43 +0.3 2,803,350 + proV b2677 0.43 -0.2 2,803,351 + proV b2677 0.43 -0.3 2,803,351 + proV b2677 0.43 +0.9 2,803,352 + proV b2677 0.43 -1.3 2,803,356 + proV b2677 0.43 +2.9 2,803,362 + proV b2677 0.44 +0.2 2,803,362 + proV b2677 0.44 +1.5 2,803,364 - proV b2677 0.44 +0.0 2,803,366 + proV b2677 0.44 +0.7 2,803,370 - proV b2677 0.44 +1.4 2,803,442 + proV b2677 0.50 -0.2 2,803,442 + proV b2677 0.50 -0.9 2,803,473 + proV b2677 0.53 -0.1 2,803,473 + proV b2677 0.53 -0.4
Or see this region's nucleotide sequence