Experiment: deuterated glucose in H2O
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt atoB and yfaP are separated by 73 nucleotides yfaP and yfaQ are separated by 4 nucleotides yfaQ and yfaS are separated by 0 nucleotides
b2224: atoB - acetyl-CoA acetyltransferase (NCBI), at 2,324,131 to 2,325,315
atoB
b2225: yfaP - hypothetical protein (NCBI), at 2,325,389 to 2,326,165
yfaP
b2226: yfaQ - hypothetical protein (NCBI), at 2,326,170 to 2,327,819
yfaQ
b4500: yfaS - no description, at 2,327,820 to 2,332,424
yfaS
Position (kb)
2326
2327
2328 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2325.215 kb on - strand at 2325.222 kb on - strand at 2325.224 kb on - strand at 2325.224 kb on - strand at 2325.226 kb on + strand at 2325.354 kb on + strand at 2325.354 kb on + strand at 2325.393 kb on - strand at 2325.393 kb on - strand at 2325.488 kb on + strand, within yfaP at 2325.526 kb on + strand, within yfaP at 2325.537 kb on - strand, within yfaP at 2325.555 kb on - strand, within yfaP at 2325.623 kb on - strand, within yfaP at 2325.623 kb on - strand, within yfaP at 2325.656 kb on - strand, within yfaP at 2325.756 kb on + strand, within yfaP at 2325.759 kb on - strand, within yfaP at 2325.970 kb on + strand, within yfaP at 2325.970 kb on + strand, within yfaP at 2326.112 kb on - strand at 2326.112 kb on - strand at 2326.209 kb on + strand at 2326.209 kb on + strand at 2326.237 kb on - strand at 2326.286 kb on - strand at 2326.338 kb on - strand, within yfaQ at 2326.388 kb on - strand, within yfaQ at 2326.388 kb on - strand, within yfaQ at 2326.393 kb on - strand, within yfaQ at 2326.394 kb on - strand, within yfaQ at 2326.397 kb on - strand, within yfaQ at 2326.490 kb on + strand, within yfaQ at 2326.531 kb on + strand, within yfaQ at 2326.531 kb on + strand, within yfaQ at 2326.551 kb on + strand, within yfaQ at 2326.584 kb on + strand, within yfaQ at 2326.675 kb on + strand, within yfaQ at 2326.690 kb on + strand, within yfaQ at 2326.803 kb on - strand, within yfaQ at 2326.803 kb on - strand, within yfaQ at 2326.893 kb on + strand at 2326.954 kb on + strand, within yfaQ at 2326.954 kb on + strand, within yfaQ at 2326.954 kb on + strand, within yfaQ at 2327.035 kb on + strand, within yfaQ at 2327.053 kb on - strand, within yfaQ at 2327.053 kb on - strand, within yfaQ at 2327.135 kb on + strand, within yfaQ at 2327.135 kb on + strand, within yfaQ at 2327.178 kb on - strand, within yfaQ at 2327.244 kb on + strand, within yfaQ at 2327.256 kb on - strand, within yfaQ at 2327.266 kb on - strand, within yfaQ at 2327.294 kb on - strand, within yfaQ at 2327.394 kb on + strand, within yfaQ at 2327.394 kb on + strand, within yfaQ at 2327.444 kb on - strand, within yfaQ at 2327.450 kb on - strand, within yfaQ at 2327.505 kb on - strand, within yfaQ at 2327.505 kb on - strand, within yfaQ at 2327.529 kb on + strand, within yfaQ at 2327.552 kb on - strand, within yfaQ at 2327.587 kb on - strand, within yfaQ at 2327.649 kb on - strand, within yfaQ at 2327.667 kb on + strand at 2327.798 kb on + strand at 2327.821 kb on + strand at 2327.878 kb on + strand at 2327.878 kb on + strand at 2327.889 kb on - strand at 2327.981 kb on + strand at 2327.986 kb on + strand at 2327.986 kb on + strand at 2327.986 kb on + strand at 2328.074 kb on + strand at 2328.155 kb on - strand at 2328.155 kb on - strand at 2328.215 kb on + strand at 2328.229 kb on - strand at 2328.229 kb on - strand at 2328.256 kb on - strand at 2328.314 kb on + strand, within yfaS at 2328.389 kb on - strand, within yfaS at 2328.389 kb on - strand, within yfaS at 2328.518 kb on + strand, within yfaS at 2328.538 kb on - strand, within yfaS at 2328.561 kb on + strand, within yfaS at 2328.561 kb on + strand, within yfaS at 2328.593 kb on + strand, within yfaS at 2328.631 kb on + strand, within yfaS at 2328.673 kb on + strand, within yfaS
Per-strain Table
Position Strand Gene LocusTag Fraction deuterated glucose in H2O remove 2,325,215 - +0.5 2,325,222 - -1.6 2,325,224 - +0.7 2,325,224 - +1.1 2,325,226 + +0.1 2,325,354 + +0.3 2,325,354 + -1.0 2,325,393 - -0.1 2,325,393 - -0.0 2,325,488 + yfaP b2225 0.13 +0.8 2,325,526 + yfaP b2225 0.18 +0.5 2,325,537 - yfaP b2225 0.19 +1.3 2,325,555 - yfaP b2225 0.21 +2.7 2,325,623 - yfaP b2225 0.30 +1.0 2,325,623 - yfaP b2225 0.30 +0.4 2,325,656 - yfaP b2225 0.34 +0.3 2,325,756 + yfaP b2225 0.47 +0.1 2,325,759 - yfaP b2225 0.48 +0.8 2,325,970 + yfaP b2225 0.75 +0.3 2,325,970 + yfaP b2225 0.75 +0.1 2,326,112 - +0.1 2,326,112 - +0.4 2,326,209 + +0.0 2,326,209 + +1.2 2,326,237 - +1.1 2,326,286 - -0.8 2,326,338 - yfaQ b2226 0.10 -0.2 2,326,388 - yfaQ b2226 0.13 +1.3 2,326,388 - yfaQ b2226 0.13 -0.5 2,326,393 - yfaQ b2226 0.14 -0.2 2,326,394 - yfaQ b2226 0.14 -0.3 2,326,397 - yfaQ b2226 0.14 -0.4 2,326,490 + yfaQ b2226 0.19 +0.1 2,326,531 + yfaQ b2226 0.22 +0.5 2,326,531 + yfaQ b2226 0.22 -1.5 2,326,551 + yfaQ b2226 0.23 -2.2 2,326,584 + yfaQ b2226 0.25 -3.2 2,326,675 + yfaQ b2226 0.31 -1.4 2,326,690 + yfaQ b2226 0.32 +0.1 2,326,803 - yfaQ b2226 0.38 -0.3 2,326,803 - yfaQ b2226 0.38 -1.8 2,326,893 + +2.3 2,326,954 + yfaQ b2226 0.48 -0.6 2,326,954 + yfaQ b2226 0.48 +0.9 2,326,954 + yfaQ b2226 0.48 -0.0 2,327,035 + yfaQ b2226 0.52 -0.0 2,327,053 - yfaQ b2226 0.54 -0.3 2,327,053 - yfaQ b2226 0.54 +0.1 2,327,135 + yfaQ b2226 0.58 -0.7 2,327,135 + yfaQ b2226 0.58 -0.5 2,327,178 - yfaQ b2226 0.61 -0.5 2,327,244 + yfaQ b2226 0.65 -1.0 2,327,256 - yfaQ b2226 0.66 +0.3 2,327,266 - yfaQ b2226 0.66 -0.1 2,327,294 - yfaQ b2226 0.68 +0.3 2,327,394 + yfaQ b2226 0.74 +1.7 2,327,394 + yfaQ b2226 0.74 +0.2 2,327,444 - yfaQ b2226 0.77 -0.7 2,327,450 - yfaQ b2226 0.78 -0.5 2,327,505 - yfaQ b2226 0.81 -0.9 2,327,505 - yfaQ b2226 0.81 +0.8 2,327,529 + yfaQ b2226 0.82 +1.0 2,327,552 - yfaQ b2226 0.84 -0.0 2,327,587 - yfaQ b2226 0.86 -1.0 2,327,649 - yfaQ b2226 0.90 -0.0 2,327,667 + +0.9 2,327,798 + +0.7 2,327,821 + +2.0 2,327,878 + -0.8 2,327,878 + -0.5 2,327,889 - -0.6 2,327,981 + -0.9 2,327,986 + -2.8 2,327,986 + -0.1 2,327,986 + -0.5 2,328,074 + +0.7 2,328,155 - -2.7 2,328,155 - +0.8 2,328,215 + -1.0 2,328,229 - +1.3 2,328,229 - -0.3 2,328,256 - -1.6 2,328,314 + yfaS b4500 0.11 +0.6 2,328,389 - yfaS b4500 0.12 +0.2 2,328,389 - yfaS b4500 0.12 +0.3 2,328,518 + yfaS b4500 0.15 -1.3 2,328,538 - yfaS b4500 0.16 +1.3 2,328,561 + yfaS b4500 0.16 -0.4 2,328,561 + yfaS b4500 0.16 +0.1 2,328,593 + yfaS b4500 0.17 -0.3 2,328,631 + yfaS b4500 0.18 -0.1 2,328,673 + yfaS b4500 0.19 +0.4
Or see this region's nucleotide sequence