Experiment: deuterated glucose in H2O
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ydcL and insP are separated by 92 nucleotides insP and insQ are separated by 67 nucleotides insQ and b1433 are separated by 39 nucleotides
b1431: ydcL - predicted lipoprotein (NCBI), at 1,500,481 to 1,501,149
ydcL
b4578: insP - no description, at 1,501,242 to 1,501,673
insP
b1432: insQ - IS609 transposase B (RefSeq), at 1,501,741 to 1,502,889
insQ
b1433: b1433 - putative membrane transport protein (VIMSS), at 1,502,929 to 1,504,104
b1433
Position (kb)
1501
1502
1503 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1500.762 kb on + strand, within ydcL at 1500.946 kb on + strand, within ydcL at 1501.107 kb on + strand at 1501.107 kb on + strand at 1501.126 kb on - strand at 1501.226 kb on - strand at 1501.226 kb on - strand at 1501.257 kb on + strand at 1501.305 kb on - strand, within insP at 1501.305 kb on - strand, within insP at 1501.361 kb on - strand, within insP at 1501.430 kb on - strand, within insP at 1501.472 kb on - strand, within insP at 1501.681 kb on + strand at 1501.681 kb on + strand at 1501.929 kb on + strand, within insQ at 1502.154 kb on + strand, within insQ at 1502.160 kb on + strand, within insQ at 1502.263 kb on + strand, within insQ at 1502.469 kb on + strand, within insQ at 1502.664 kb on + strand, within insQ at 1502.664 kb on + strand, within insQ at 1502.809 kb on + strand at 1502.835 kb on - strand at 1503.340 kb on - strand, within b1433 at 1503.447 kb on + strand, within b1433 at 1503.447 kb on + strand, within b1433 at 1503.479 kb on - strand, within b1433 at 1503.479 kb on - strand, within b1433 at 1503.536 kb on + strand, within b1433 at 1503.536 kb on + strand, within b1433 at 1503.832 kb on + strand, within b1433
Per-strain Table
Position Strand Gene LocusTag Fraction deuterated glucose in H2O remove 1,500,762 + ydcL b1431 0.42 -0.3 1,500,946 + ydcL b1431 0.70 -0.9 1,501,107 + -2.6 1,501,107 + -1.4 1,501,126 - +0.1 1,501,226 - +0.8 1,501,226 - -0.2 1,501,257 + -0.1 1,501,305 - insP b4578 0.15 +0.6 1,501,305 - insP b4578 0.15 +0.3 1,501,361 - insP b4578 0.28 +0.4 1,501,430 - insP b4578 0.44 +0.2 1,501,472 - insP b4578 0.53 +0.3 1,501,681 + +0.5 1,501,681 + +1.2 1,501,929 + insQ b1432 0.16 -0.9 1,502,154 + insQ b1432 0.36 +2.1 1,502,160 + insQ b1432 0.36 -0.7 1,502,263 + insQ b1432 0.45 -1.1 1,502,469 + insQ b1432 0.63 -1.0 1,502,664 + insQ b1432 0.80 -1.2 1,502,664 + insQ b1432 0.80 -1.1 1,502,809 + -1.2 1,502,835 - +1.1 1,503,340 - b1433 b1433 0.35 +0.1 1,503,447 + b1433 b1433 0.44 +0.8 1,503,447 + b1433 b1433 0.44 +0.4 1,503,479 - b1433 b1433 0.47 +0.1 1,503,479 - b1433 b1433 0.47 +0.3 1,503,536 + b1433 b1433 0.52 -0.6 1,503,536 + b1433 b1433 0.52 +0.5 1,503,832 + b1433 b1433 0.77 -0.1
Or see this region's nucleotide sequence