Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12500

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_12495 and CA264_12500 are separated by 178 nucleotidesCA264_12500 and CA264_12505 overlap by 4 nucleotidesCA264_12505 and CA264_12510 overlap by 11 nucleotides CA264_12495: CA264_12495 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 2,909,912 to 2,910,934 _12495 CA264_12500: CA264_12500 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, at 2,911,113 to 2,912,507 _12500 CA264_12505: CA264_12505 - acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase, at 2,912,504 to 2,913,295 _12505 CA264_12510: CA264_12510 - ABC transporter ATP-binding protein, at 2,913,285 to 2,913,917 _12510 Position (kb) 2911 2912 2913Strain fitness (log2 ratio) -1 0 1 2at 2910.946 kb on - strandat 2910.946 kb on - strandat 2910.968 kb on + strandat 2910.988 kb on - strandat 2910.992 kb on + strandat 2910.992 kb on + strandat 2911.031 kb on + strandat 2911.031 kb on + strandat 2911.034 kb on - strandat 2911.034 kb on - strandat 2911.034 kb on - strandat 2911.037 kb on + strandat 2911.037 kb on + strandat 2911.059 kb on + strandat 2911.079 kb on + strandat 2911.102 kb on + strandat 2911.103 kb on - strandat 2911.103 kb on - strandat 2911.103 kb on - strandat 2912.491 kb on + strandat 2912.518 kb on - strandat 2912.527 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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2,910,946 - -0.6
2,910,946 - +0.9
2,910,968 + -0.5
2,910,988 - +0.0
2,910,992 + -0.1
2,910,992 + -0.3
2,911,031 + +0.1
2,911,031 + -0.1
2,911,034 - +0.7
2,911,034 - +0.3
2,911,034 - +0.9
2,911,037 + +1.1
2,911,037 + -0.0
2,911,059 + +0.6
2,911,079 + +0.7
2,911,102 + +0.5
2,911,103 - -0.2
2,911,103 - -0.7
2,911,103 - -0.2
2,912,491 + -0.8
2,912,518 - +1.1
2,912,527 - +1.9

Or see this region's nucleotide sequence