Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10855 and CA264_10860 are separated by 76 nucleotides CA264_10860 and CA264_10865 are separated by 28 nucleotides CA264_10865 and CA264_10870 overlap by 1 nucleotides
CA264_10855: CA264_10855 - cell division protein, at 2,509,517 to 2,511,529
_10855
CA264_10860: CA264_10860 - hypothetical protein, at 2,511,606 to 2,512,037
_10860
CA264_10865: CA264_10865 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase, at 2,512,066 to 2,512,986
_10865
CA264_10870: CA264_10870 - division/cell wall cluster transcriptional repressor MraZ, at 2,512,986 to 2,513,453
_10870
Position (kb)
2511
2512
2513 Strain fitness (log2 ratio)
-2
-1
0
1 at 2511.596 kb on + strand at 2511.897 kb on + strand, within CA264_10860 at 2511.907 kb on + strand, within CA264_10860 at 2511.907 kb on + strand, within CA264_10860 at 2512.024 kb on - strand at 2512.057 kb on + strand at 2512.058 kb on - strand at 2512.067 kb on + strand at 2512.916 kb on + strand at 2512.980 kb on - strand at 2512.987 kb on + strand at 2512.989 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 2,511,596 + -0.1 2,511,897 + CA264_10860 0.67 -2.1 2,511,907 + CA264_10860 0.70 -0.5 2,511,907 + CA264_10860 0.70 +0.2 2,512,024 - +0.8 2,512,057 + -0.5 2,512,058 - +0.4 2,512,067 + -0.5 2,512,916 + -0.5 2,512,980 - -1.6 2,512,987 + +0.7 2,512,989 + +0.5
Or see this region's nucleotide sequence