Experiment: DL-2-Aminobutyric (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0710 and Atu0711 are separated by 15 nucleotides Atu0711 and Atu0712 are separated by 342 nucleotides
Atu0710: Atu0710 - magnesium/cobalt transport protein, at 710,699 to 711,727
Atu0710
Atu0711: Atu0711 - potassium uptake protein, at 711,743 to 713,662
Atu0711
Atu0712: Atu0712 - hypothetical protein, at 714,005 to 715,186
Atu0712
Position (kb) 711
712
713
714 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 710.800 kb on - strand at 710.848 kb on - strand, within Atu0710 at 710.917 kb on + strand, within Atu0710 at 710.917 kb on + strand, within Atu0710 at 710.949 kb on + strand, within Atu0710 at 711.017 kb on - strand, within Atu0710 at 711.064 kb on + strand, within Atu0710 at 711.163 kb on - strand, within Atu0710 at 711.262 kb on + strand, within Atu0710 at 711.332 kb on - strand, within Atu0710 at 711.350 kb on - strand, within Atu0710 at 711.403 kb on + strand, within Atu0710 at 711.403 kb on - strand, within Atu0710 at 711.421 kb on + strand, within Atu0710 at 711.421 kb on + strand, within Atu0710 at 711.429 kb on - strand, within Atu0710 at 711.429 kb on - strand, within Atu0710 at 711.654 kb on + strand at 711.721 kb on + strand at 711.721 kb on + strand at 711.729 kb on - strand at 711.879 kb on - strand at 711.880 kb on - strand at 711.909 kb on + strand at 712.120 kb on + strand, within Atu0711 at 712.120 kb on + strand, within Atu0711 at 712.128 kb on - strand, within Atu0711 at 712.295 kb on - strand, within Atu0711 at 712.375 kb on + strand, within Atu0711 at 712.453 kb on - strand, within Atu0711 at 712.479 kb on + strand, within Atu0711 at 712.487 kb on - strand, within Atu0711 at 712.528 kb on - strand, within Atu0711 at 712.606 kb on - strand, within Atu0711 at 712.610 kb on - strand, within Atu0711 at 712.616 kb on + strand, within Atu0711 at 712.777 kb on + strand, within Atu0711 at 712.787 kb on + strand, within Atu0711 at 712.827 kb on - strand, within Atu0711 at 712.851 kb on - strand, within Atu0711 at 712.851 kb on - strand, within Atu0711 at 712.887 kb on + strand, within Atu0711 at 712.895 kb on - strand, within Atu0711 at 712.918 kb on - strand, within Atu0711 at 712.982 kb on + strand, within Atu0711 at 713.019 kb on - strand, within Atu0711 at 713.282 kb on - strand, within Atu0711 at 713.286 kb on + strand, within Atu0711 at 713.294 kb on - strand, within Atu0711 at 713.356 kb on + strand, within Atu0711 at 713.433 kb on + strand, within Atu0711 at 713.444 kb on + strand, within Atu0711 at 713.615 kb on - strand at 713.626 kb on - strand at 713.754 kb on - strand at 713.756 kb on + strand at 713.764 kb on - strand at 713.774 kb on - strand at 714.026 kb on - strand at 714.026 kb on - strand at 714.051 kb on - strand at 714.091 kb on - strand at 714.115 kb on - strand at 714.215 kb on + strand, within Atu0712 at 714.234 kb on + strand, within Atu0712 at 714.325 kb on + strand, within Atu0712 at 714.327 kb on - strand, within Atu0712 at 714.417 kb on - strand, within Atu0712 at 714.418 kb on - strand, within Atu0712 at 714.491 kb on + strand, within Atu0712 at 714.533 kb on + strand, within Atu0712 at 714.536 kb on + strand, within Atu0712
Per-strain Table
Position Strand Gene LocusTag Fraction DL-2-Aminobutyric (N) remove 710,800 - +0.5 710,848 - Atu0710 0.14 -0.5 710,917 + Atu0710 0.21 -0.1 710,917 + Atu0710 0.21 -0.7 710,949 + Atu0710 0.24 -0.7 711,017 - Atu0710 0.31 -1.6 711,064 + Atu0710 0.35 -0.3 711,163 - Atu0710 0.45 -0.2 711,262 + Atu0710 0.55 -0.0 711,332 - Atu0710 0.62 -0.7 711,350 - Atu0710 0.63 -0.4 711,403 + Atu0710 0.68 +0.2 711,403 - Atu0710 0.68 +0.5 711,421 + Atu0710 0.70 -0.9 711,421 + Atu0710 0.70 -0.5 711,429 - Atu0710 0.71 +0.1 711,429 - Atu0710 0.71 +0.4 711,654 + +0.4 711,721 + +0.2 711,721 + +0.5 711,729 - -1.8 711,879 - -0.6 711,880 - +0.7 711,909 + +2.5 712,120 + Atu0711 0.20 -0.0 712,120 + Atu0711 0.20 +1.1 712,128 - Atu0711 0.20 +0.1 712,295 - Atu0711 0.29 -0.5 712,375 + Atu0711 0.33 -2.1 712,453 - Atu0711 0.37 +2.6 712,479 + Atu0711 0.38 +1.1 712,487 - Atu0711 0.39 +0.6 712,528 - Atu0711 0.41 +1.1 712,606 - Atu0711 0.45 -0.8 712,610 - Atu0711 0.45 +0.3 712,616 + Atu0711 0.45 +0.7 712,777 + Atu0711 0.54 +0.6 712,787 + Atu0711 0.54 +0.2 712,827 - Atu0711 0.56 +3.4 712,851 - Atu0711 0.58 -0.5 712,851 - Atu0711 0.58 +2.4 712,887 + Atu0711 0.60 +0.1 712,895 - Atu0711 0.60 +1.9 712,918 - Atu0711 0.61 +1.0 712,982 + Atu0711 0.65 +2.4 713,019 - Atu0711 0.66 +0.1 713,282 - Atu0711 0.80 +2.2 713,286 + Atu0711 0.80 +1.0 713,294 - Atu0711 0.81 -0.1 713,356 + Atu0711 0.84 +1.1 713,433 + Atu0711 0.88 +0.9 713,444 + Atu0711 0.89 +2.4 713,615 - +1.1 713,626 - -0.8 713,754 - +0.9 713,756 + -0.2 713,764 - +0.3 713,774 - -0.6 714,026 - +0.1 714,026 - -0.4 714,051 - +1.1 714,091 - +0.9 714,115 - +0.2 714,215 + Atu0712 0.18 +0.4 714,234 + Atu0712 0.19 -0.2 714,325 + Atu0712 0.27 -0.3 714,327 - Atu0712 0.27 -1.0 714,417 - Atu0712 0.35 +0.2 714,418 - Atu0712 0.35 +3.9 714,491 + Atu0712 0.41 -1.3 714,533 + Atu0712 0.45 +1.6 714,536 + Atu0712 0.45 -0.4
Or see this region's nucleotide sequence