Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27025 and PS417_27030 are separated by 243 nucleotides PS417_27030 and PS417_27035 are separated by 21 nucleotides
PS417_27025: PS417_27025 - DNA-binding protein, at 5,835,833 to 5,836,759
_27025
PS417_27030: PS417_27030 - hypothetical protein, at 5,837,003 to 5,837,668
_27030
PS417_27035: PS417_27035 - FAD-linked oxidase, at 5,837,690 to 5,839,084
_27035
Position (kb)
5837
5838 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5836.150 kb on + strand, within PS417_27025 at 5836.257 kb on + strand, within PS417_27025 at 5836.257 kb on + strand, within PS417_27025 at 5836.257 kb on + strand, within PS417_27025 at 5836.258 kb on - strand, within PS417_27025 at 5836.258 kb on - strand, within PS417_27025 at 5836.258 kb on - strand, within PS417_27025 at 5836.494 kb on + strand, within PS417_27025 at 5836.494 kb on + strand, within PS417_27025 at 5836.495 kb on - strand, within PS417_27025 at 5836.561 kb on - strand, within PS417_27025 at 5836.561 kb on - strand, within PS417_27025 at 5836.575 kb on - strand, within PS417_27025 at 5836.787 kb on + strand at 5836.788 kb on - strand at 5836.890 kb on - strand at 5837.594 kb on - strand, within PS417_27030 at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.649 kb on + strand at 5837.650 kb on - strand at 5837.650 kb on - strand at 5837.662 kb on - strand at 5837.760 kb on + strand at 5837.787 kb on + strand at 5838.511 kb on + strand, within PS417_27035
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 5,836,150 + PS417_27025 0.34 -0.1 5,836,257 + PS417_27025 0.46 -0.3 5,836,257 + PS417_27025 0.46 +1.3 5,836,257 + PS417_27025 0.46 -0.4 5,836,258 - PS417_27025 0.46 +1.3 5,836,258 - PS417_27025 0.46 +0.1 5,836,258 - PS417_27025 0.46 -0.3 5,836,494 + PS417_27025 0.71 +0.2 5,836,494 + PS417_27025 0.71 +0.5 5,836,495 - PS417_27025 0.71 +0.5 5,836,561 - PS417_27025 0.79 -0.0 5,836,561 - PS417_27025 0.79 -3.6 5,836,575 - PS417_27025 0.80 +0.2 5,836,787 + +0.3 5,836,788 - +1.1 5,836,890 - -0.2 5,837,594 - PS417_27030 0.89 +1.1 5,837,649 + -0.9 5,837,649 + +0.2 5,837,649 + +0.0 5,837,649 + +0.1 5,837,649 + -0.2 5,837,649 + +0.4 5,837,649 + +0.2 5,837,650 - -0.0 5,837,650 - +0.1 5,837,662 - -0.4 5,837,760 + +0.3 5,837,787 + +0.3 5,838,511 + PS417_27035 0.59 -1.4
Or see this region's nucleotide sequence