Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26945 and PS417_26950 are separated by 240 nucleotides PS417_26950 and PS417_26955 are separated by 16 nucleotides
PS417_26945: PS417_26945 - sulfate ABC transporter ATP-binding protein, at 5,819,192 to 5,820,256
_26945
PS417_26950: PS417_26950 - LysR family transcriptional regulator, at 5,820,497 to 5,821,360
_26950
PS417_26955: PS417_26955 - ATPase P, at 5,821,377 to 5,823,623
_26955
Position (kb) 5820
5821
5822 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5819.527 kb on + strand, within PS417_26945 at 5819.527 kb on + strand at 5819.528 kb on - strand, within PS417_26945 at 5819.574 kb on + strand, within PS417_26945 at 5819.575 kb on - strand, within PS417_26945 at 5819.575 kb on - strand, within PS417_26945 at 5819.575 kb on - strand, within PS417_26945 at 5819.575 kb on - strand, within PS417_26945 at 5819.595 kb on + strand, within PS417_26945 at 5819.909 kb on + strand, within PS417_26945 at 5819.910 kb on - strand, within PS417_26945 at 5820.052 kb on - strand, within PS417_26945 at 5820.052 kb on - strand, within PS417_26945 at 5820.223 kb on + strand at 5820.345 kb on + strand at 5820.346 kb on - strand at 5820.498 kb on + strand at 5820.498 kb on + strand at 5820.499 kb on - strand at 5820.499 kb on - strand at 5820.499 kb on - strand at 5820.502 kb on + strand at 5820.502 kb on + strand at 5820.502 kb on + strand at 5820.502 kb on + strand at 5820.503 kb on - strand at 5820.503 kb on - strand at 5820.503 kb on - strand at 5820.503 kb on - strand at 5820.503 kb on - strand at 5820.573 kb on + strand at 5820.830 kb on + strand, within PS417_26950 at 5820.831 kb on - strand, within PS417_26950 at 5820.831 kb on - strand, within PS417_26950 at 5821.059 kb on + strand, within PS417_26950 at 5821.059 kb on + strand, within PS417_26950 at 5821.059 kb on + strand, within PS417_26950 at 5821.059 kb on + strand, within PS417_26950 at 5821.059 kb on + strand, within PS417_26950 at 5821.059 kb on + strand, within PS417_26950 at 5821.060 kb on - strand, within PS417_26950 at 5821.062 kb on + strand, within PS417_26950 at 5821.062 kb on + strand, within PS417_26950 at 5821.063 kb on - strand, within PS417_26950 at 5821.063 kb on - strand, within PS417_26950 at 5821.063 kb on - strand, within PS417_26950 at 5821.063 kb on - strand, within PS417_26950 at 5821.063 kb on - strand, within PS417_26950 at 5821.162 kb on + strand, within PS417_26950 at 5821.162 kb on + strand, within PS417_26950 at 5821.343 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 5,819,527 + PS417_26945 0.31 +0.7 5,819,527 + +2.5 5,819,528 - PS417_26945 0.32 -1.1 5,819,574 + PS417_26945 0.36 -0.3 5,819,575 - PS417_26945 0.36 +0.8 5,819,575 - PS417_26945 0.36 +0.8 5,819,575 - PS417_26945 0.36 -0.1 5,819,575 - PS417_26945 0.36 +0.7 5,819,595 + PS417_26945 0.38 +1.1 5,819,909 + PS417_26945 0.67 +0.3 5,819,910 - PS417_26945 0.67 +0.9 5,820,052 - PS417_26945 0.81 +0.6 5,820,052 - PS417_26945 0.81 +1.1 5,820,223 + -0.0 5,820,345 + +0.1 5,820,346 - -2.0 5,820,498 + +0.1 5,820,498 + -0.3 5,820,499 - +0.1 5,820,499 - -0.2 5,820,499 - -0.0 5,820,502 + +0.4 5,820,502 + +0.4 5,820,502 + +0.3 5,820,502 + +0.8 5,820,503 - +0.3 5,820,503 - -0.2 5,820,503 - -0.4 5,820,503 - -1.2 5,820,503 - -0.1 5,820,573 + +0.0 5,820,830 + PS417_26950 0.39 +0.9 5,820,831 - PS417_26950 0.39 +0.4 5,820,831 - PS417_26950 0.39 +0.9 5,821,059 + PS417_26950 0.65 +1.4 5,821,059 + PS417_26950 0.65 +0.7 5,821,059 + PS417_26950 0.65 -0.1 5,821,059 + PS417_26950 0.65 -0.6 5,821,059 + PS417_26950 0.65 -2.7 5,821,059 + PS417_26950 0.65 +0.5 5,821,060 - PS417_26950 0.65 +0.9 5,821,062 + PS417_26950 0.65 +0.3 5,821,062 + PS417_26950 0.65 +0.3 5,821,063 - PS417_26950 0.66 +0.3 5,821,063 - PS417_26950 0.66 -0.3 5,821,063 - PS417_26950 0.66 -0.0 5,821,063 - PS417_26950 0.66 +0.5 5,821,063 - PS417_26950 0.66 -0.1 5,821,162 + PS417_26950 0.77 +0.0 5,821,162 + PS417_26950 0.77 +0.2 5,821,343 + +0.2
Or see this region's nucleotide sequence