Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19405 and PS417_19410 are separated by 154 nucleotides PS417_19410 and PS417_19415 are separated by 396 nucleotides PS417_19415 and PS417_19420 overlap by 4 nucleotides PS417_19420 and PS417_19425 are separated by 41 nucleotides
PS417_19405: PS417_19405 - hypothetical protein, at 4,204,517 to 4,209,751
_19405
PS417_19410: PS417_19410 - 5-hydroxyisourate hydrolase, at 4,209,906 to 4,210,259
_19410
PS417_19415: PS417_19415 - allantoinase, at 4,210,656 to 4,211,582
_19415
PS417_19420: PS417_19420 - OHCU decarboxylase, at 4,211,579 to 4,212,094
_19420
PS417_19425: PS417_19425 - allantoicase, at 4,212,136 to 4,213,131
_19425
Position (kb)
4210
4211
4212 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 4209.679 kb on + strand at 4209.686 kb on + strand at 4209.787 kb on - strand at 4209.813 kb on + strand at 4209.813 kb on + strand at 4209.813 kb on + strand at 4209.814 kb on - strand at 4209.814 kb on - strand at 4209.817 kb on + strand at 4209.817 kb on + strand at 4209.817 kb on + strand at 4209.817 kb on + strand at 4209.817 kb on + strand at 4209.818 kb on - strand at 4209.818 kb on - strand at 4209.818 kb on - strand at 4209.821 kb on + strand at 4209.920 kb on - strand at 4209.928 kb on + strand at 4209.929 kb on - strand at 4210.286 kb on + strand at 4210.612 kb on - strand at 4210.884 kb on + strand, within PS417_19415 at 4211.058 kb on + strand, within PS417_19415 at 4211.146 kb on - strand, within PS417_19415 at 4211.599 kb on + strand at 4211.928 kb on - strand, within PS417_19420 at 4211.928 kb on - strand, within PS417_19420 at 4211.965 kb on - strand, within PS417_19420 at 4211.965 kb on - strand, within PS417_19420 at 4212.061 kb on + strand at 4212.061 kb on + strand at 4212.061 kb on + strand at 4212.062 kb on - strand at 4212.146 kb on - strand at 4212.146 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 4,209,679 + -0.3 4,209,686 + -0.2 4,209,787 - +0.7 4,209,813 + -1.3 4,209,813 + -0.2 4,209,813 + -0.2 4,209,814 - +1.1 4,209,814 - +0.5 4,209,817 + -0.7 4,209,817 + -0.3 4,209,817 + -0.4 4,209,817 + +0.1 4,209,817 + -0.6 4,209,818 - -0.2 4,209,818 - +0.6 4,209,818 - +0.4 4,209,821 + +0.0 4,209,920 - -1.2 4,209,928 + -3.2 4,209,929 - -4.0 4,210,286 + -2.3 4,210,612 - -4.1 4,210,884 + PS417_19415 0.25 -4.9 4,211,058 + PS417_19415 0.43 -4.5 4,211,146 - PS417_19415 0.53 -0.4 4,211,599 + -2.7 4,211,928 - PS417_19420 0.68 -2.2 4,211,928 - PS417_19420 0.68 -3.2 4,211,965 - PS417_19420 0.75 -6.1 4,211,965 - PS417_19420 0.75 -3.7 4,212,061 + -3.5 4,212,061 + -2.6 4,212,061 + -0.2 4,212,062 - -1.2 4,212,146 - -3.1 4,212,146 - -3.0
Or see this region's nucleotide sequence