Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3600

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
4,270,333	+		Echvi_3599	0.22	-1.4
4,270,333	+		Echvi_3599	0.22	+0.1
4,270,334	-		Echvi_3599	0.22	-0.6
4,270,335	+		Echvi_3599	0.23	-1.7
4,270,335	+		Echvi_3599	0.23	-1.5
4,270,335	+		Echvi_3599	0.23	-1.0
4,270,336	-		Echvi_3599	0.23	+0.4
4,270,336	-		Echvi_3599	0.23	-0.4
4,270,337	+		Echvi_3599	0.23	+0.1
4,270,337	+		Echvi_3599	0.23	+1.4
4,270,337	+		Echvi_3599	0.23	-1.1
4,270,337	+		Echvi_3599	0.23	+1.1
4,270,338	-		Echvi_3599	0.23	+0.7
4,270,338	-		Echvi_3599	0.23	+0.1
4,270,338	-		Echvi_3599	0.23	+0.6
4,270,443	+		Echvi_3599	0.41	+0.5
4,270,444	-		Echvi_3599	0.41	+0.7
4,270,455	+		Echvi_3599	0.43	-0.3
4,270,483	+		Echvi_3599	0.47	+0.0
4,270,505	+		Echvi_3599	0.51	-2.5
4,270,505	+		Echvi_3599	0.51	+0.1
4,270,563	+		Echvi_3599	0.61	-0.5
4,270,627	+		Echvi_3599	0.72	+0.2
4,270,628	-		Echvi_3599	0.72	+0.2
4,270,628	-		Echvi_3599	0.72	+0.8
4,270,648	+		Echvi_3599	0.75	+0.6
4,270,648	+		Echvi_3599	0.75	-0.6
4,270,659	+		Echvi_3599	0.77	-0.3
4,270,660	-		Echvi_3599	0.77	-0.0
4,270,749	-				-1.4
4,270,757	-				-0.8
4,270,768	+				-0.3
4,270,768	+				+0.1
4,270,769	-				-0.7
4,270,778	-				-0.9
4,270,795	-				-0.2
4,270,799	+				-1.1
4,270,800	-				+2.7
4,270,800	-				+1.2
4,270,836	+				-2.0
4,270,837	-				+1.7
4,270,850	+				+0.6
4,270,929	+				+0.8
4,271,004	-				-0.5
4,271,160	+				-0.8
4,271,286	+				+0.8
4,271,286	+				+0.5
4,271,286	+				+0.8
4,271,286	+				+0.3
4,271,333	-				+0.6
4,271,711	+		Echvi_3600	0.28	-0.2
4,271,711	+		Echvi_3600	0.28	-0.1
4,271,711	+		Echvi_3600	0.28	-1.5
4,271,711	+		Echvi_3600	0.28	-1.4
4,271,711	+		Echvi_3600	0.28	+0.7
4,271,712	-		Echvi_3600	0.28	+2.7
4,271,712	-		Echvi_3600	0.28	+0.8
4,271,738	+		Echvi_3600	0.30	+0.4
4,271,742	+		Echvi_3600	0.31	-0.4
4,271,743	-		Echvi_3600	0.31	+0.3
4,271,755	+		Echvi_3600	0.32	-0.9
4,271,756	-		Echvi_3600	0.32	-0.4
4,271,784	+		Echvi_3600	0.34	+0.1
4,271,784	+		Echvi_3600	0.34	-0.3
4,271,784	+		Echvi_3600	0.34	+0.4
4,271,784	+		Echvi_3600	0.34	-0.5
4,271,784	+		Echvi_3600	0.34	-0.1
4,271,785	-		Echvi_3600	0.34	-0.1
4,271,785	-		Echvi_3600	0.34	+0.1
4,271,785	-		Echvi_3600	0.34	-0.6
4,271,860	-		Echvi_3600	0.39	+0.2
4,271,899	+		Echvi_3600	0.42	-1.0
4,271,900	-		Echvi_3600	0.42	-0.5
4,271,926	-		Echvi_3600	0.44	+0.3
4,271,926	-		Echvi_3600	0.44	-0.1
4,271,961	-		Echvi_3600	0.47	+1.7
4,271,979	+		Echvi_3600	0.48	-1.2
4,271,979	+		Echvi_3600	0.48	-1.2
4,272,021	-		Echvi_3600	0.51	+1.2
4,272,021	-		Echvi_3600	0.51	-1.9
4,272,021	-		Echvi_3600	0.51	+1.1
4,272,021	-		Echvi_3600	0.51	-1.1
4,272,021	-		Echvi_3600	0.51	-0.9
4,272,051	+		Echvi_3600	0.53	-0.5
4,272,051	+		Echvi_3600	0.53	+0.3
4,272,164	+		Echvi_3600	0.61	+0.7
4,272,165	-		Echvi_3600	0.61	-0.3
4,272,165	-		Echvi_3600	0.61	-0.4
4,272,183	+		Echvi_3600	0.63	-0.2
4,272,201	+		Echvi_3600	0.64	-0.9
4,272,202	-		Echvi_3600	0.64	+1.7
4,272,205	+		Echvi_3600	0.64	+3.0
4,272,205	+		Echvi_3600	0.64	+0.1
4,272,206	-		Echvi_3600	0.64	-0.1
4,272,213	+		Echvi_3600	0.65	+0.9
4,272,256	+		Echvi_3600	0.68	-0.0
4,272,256	+		Echvi_3600	0.68	+1.2
4,272,257	-		Echvi_3600	0.68	-0.6
4,272,371	+		Echvi_3600	0.76	-0.1
4,272,371	+		Echvi_3600	0.76	+0.0
4,272,381	+		Echvi_3600	0.77	-0.1
4,272,382	-		Echvi_3600	0.77	+0.5
4,272,401	+		Echvi_3600	0.79	+0.1
4,272,468	+		Echvi_3600	0.84	-0.1
4,272,469	-		Echvi_3600	0.84	+0.5
4,272,469	-		Echvi_3600	0.84	+0.1
4,272,502	-		Echvi_3600	0.86	+1.7
4,272,519	+		Echvi_3600	0.87	-0.3
4,272,560	-				+0.9
4,272,560	-				-0.1
4,272,562	+				-0.6
4,272,562	+				+0.1
4,272,562	+				+0.1
4,272,562	+				-0.6
4,272,562	+				-0.6
4,272,563	-				-0.2
4,272,580	+				+1.4
4,272,580	+				+0.2
4,272,618	+				+1.4
4,272,619	-				+0.8
4,272,621	+				+0.3
4,272,621	+				+1.0
4,272,682	-				-0.3
4,272,693	+				-1.3
4,272,694	-				-0.2
4,272,739	+				+0.3
4,272,740	-				-0.3
4,272,740	-				-0.2
4,272,781	+				+0.7
4,272,782	-				-0.1
4,272,782	-				+2.6
4,272,785	+				+0.1
4,272,785	+				-0.4
4,272,786	-				-0.6
4,272,788	-				+1.7
4,272,804	-				-2.6
4,272,804	-				+1.7
4,272,804	-				-0.9
4,272,813	+				-1.4
4,272,814	-				-1.1
4,272,814	-				-0.6
4,272,840	-				-0.5
4,272,844	-				+0.9
4,272,856	+				+0.4
4,272,856	+				+2.4
4,272,857	-				-0.3
4,272,865	+				-0.6
4,272,871	-				+0.2
4,272,871	-				-1.2
4,272,924	+				-0.5
4,272,973	-				+1.5
4,273,003	+				-0.9
4,273,004	-				+0.1
4,273,007	+				-0.3
4,273,008	-				+1.0
4,273,030	-				-1.1
4,273,045	-				-0.2
4,273,053	-				-2.6
4,273,081	+				-0.5
4,273,084	+				+0.4
4,273,084	+				+0.7
4,273,090	+				-1.9
4,273,091	-				-0.7
4,273,091	-				-1.1
4,273,095	+				-0.9
4,273,095	+				-0.1
4,273,095	+				+1.4
4,273,095	+				+0.5
4,273,130	+		Echvi_3601	0.10	-0.6
4,273,131	-		Echvi_3601	0.10	-0.6
4,273,227	-		Echvi_3601	0.16	-1.3
4,273,286	-		Echvi_3601	0.19	+0.7
4,273,320	-		Echvi_3601	0.21	-1.0
4,273,327	+		Echvi_3601	0.22	-0.3
4,273,469	+		Echvi_3601	0.30	+1.1
4,273,576	-		Echvi_3601	0.37	-2.1
4,273,644	+		Echvi_3601	0.41	+0.7
4,273,652	+		Echvi_3601	0.41	+0.5
4,273,653	-		Echvi_3601	0.41	-0.7
4,273,655	-		Echvi_3601	0.42	-1.7
4,273,655	-		Echvi_3601	0.42	-1.1
4,273,655	-		Echvi_3601	0.42	-1.9
4,273,672	+		Echvi_3601	0.43	+2.0