Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3653

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
4,339,471	+		Echvi_3651	0.21	+0.3
4,339,486	+		Echvi_3651	0.25	-0.9
4,339,498	+		Echvi_3651	0.28	+0.2
4,339,498	+		Echvi_3651	0.28	+1.0
4,339,498	+		Echvi_3651	0.28	-0.1
4,339,501	+		Echvi_3651	0.29	-0.1
4,339,502	-		Echvi_3651	0.29	-2.6
4,339,511	+		Echvi_3651	0.31	+1.5
4,339,511	+		Echvi_3651	0.31	+0.9
4,339,565	-		Echvi_3651	0.44	+0.7
4,339,567	-		Echvi_3651	0.45	-2.7
4,339,567	-		Echvi_3651	0.45	+0.4
4,339,606	+		Echvi_3651	0.55	+0.3
4,339,618	+		Echvi_3651	0.58	+1.7
4,339,619	-		Echvi_3651	0.58	-0.7
4,339,620	+		Echvi_3651	0.58	+0.6
4,339,620	+		Echvi_3651	0.58	-0.8
4,339,620	+		Echvi_3651	0.58	-2.0
4,339,620	+		Echvi_3651	0.58	+1.0
4,339,621	-		Echvi_3651	0.58	-0.6
4,339,621	-		Echvi_3651	0.58	+0.2
4,339,621	-		Echvi_3651	0.58	+1.6
4,339,621	-		Echvi_3651	0.58	+1.7
4,339,621	-		Echvi_3651	0.58	-1.8
4,339,651	+		Echvi_3651	0.66	+0.7
4,339,680	+		Echvi_3651	0.73	+0.7
4,339,776	+				+0.3
4,339,776	+				+0.2
4,339,776	+				-1.1
4,339,805	+				-1.3
4,339,806	-				+0.0
4,339,815	-				+0.3
4,339,853	+				-0.5
4,339,854	-		Echvi_3652	0.10	-2.0
4,339,854	-		Echvi_3652	0.10	+2.2
4,339,870	+		Echvi_3652	0.12	-1.0
4,339,871	-		Echvi_3652	0.13	-0.2
4,339,964	-		Echvi_3652	0.26	+0.2
4,340,036	+		Echvi_3652	0.37	-1.3
4,340,040	+		Echvi_3652	0.38	-1.6
4,340,060	+		Echvi_3652	0.41	-0.7
4,340,074	+		Echvi_3652	0.43	+0.3
4,340,075	-		Echvi_3652	0.43	+0.7
4,340,076	+		Echvi_3652	0.43	+0.7
4,340,076	+		Echvi_3652	0.43	+0.3
4,340,076	+		Echvi_3652	0.43	+1.7
4,340,122	-		Echvi_3652	0.50	-2.9
4,340,128	-		Echvi_3652	0.51	+0.2
4,340,161	-		Echvi_3652	0.56	-0.6
4,340,190	-		Echvi_3652	0.60	-0.1
4,340,202	+		Echvi_3652	0.62	-0.7
4,340,203	-		Echvi_3652	0.62	-0.2
4,340,203	-		Echvi_3652	0.62	-0.1
4,340,203	-		Echvi_3652	0.62	+1.3
4,340,204	+		Echvi_3652	0.62	-2.1
4,340,204	+		Echvi_3652	0.62	-1.9
4,340,204	+		Echvi_3652	0.62	-0.1
4,340,205	-		Echvi_3652	0.62	+1.0
4,340,205	-		Echvi_3652	0.62	-1.3
4,340,205	-		Echvi_3652	0.62	-1.6
4,340,205	-		Echvi_3652	0.62	+0.8
4,340,205	-		Echvi_3652	0.62	-0.7
4,340,247	+		Echvi_3652	0.69	+0.7
4,340,248	-		Echvi_3652	0.69	-0.6
4,340,267	+		Echvi_3652	0.72	-0.2
4,340,267	+		Echvi_3652	0.72	+0.2
4,340,268	-		Echvi_3652	0.72	+0.0
4,340,268	-		Echvi_3652	0.72	+0.1
4,340,350	+		Echvi_3652	0.84	+1.6
4,340,350	+		Echvi_3652	0.84	+1.5
4,340,351	-		Echvi_3652	0.84	+1.7
4,340,368	+		Echvi_3652	0.87	+1.3
4,340,369	-		Echvi_3652	0.87	+0.5
4,340,374	-		Echvi_3652	0.88	-1.0
4,340,374	-		Echvi_3652	0.88	-0.8
4,340,381	+		Echvi_3652	0.89	+0.4
4,340,398	-				+0.2
4,340,434	+				-2.6
4,340,435	-				-0.8
4,340,435	-				+0.1
4,340,463	-				+0.4
4,340,463	-				-0.8
4,340,463	-				-0.5
4,340,464	+				-0.1
4,340,464	+				-0.8
4,340,465	-				+0.7
4,340,465	-				-0.6
4,340,465	-				-1.8
4,340,465	-				-1.0
4,340,465	-				-0.6
4,340,482	+				-0.1
4,340,703	+		Echvi_3653	0.29	-0.0
4,340,719	-		Echvi_3653	0.30	-0.3
4,340,783	+		Echvi_3653	0.38	+1.1
4,340,791	-		Echvi_3653	0.39	+0.1
4,340,945	-		Echvi_3653	0.56	-0.7
4,340,976	+		Echvi_3653	0.60	+0.6
4,340,976	+		Echvi_3653	0.60	+0.3
4,340,976	+		Echvi_3653	0.60	-1.1
4,340,976	+		Echvi_3653	0.60	+0.8
4,340,977	-		Echvi_3653	0.60	+0.0
4,340,977	-		Echvi_3653	0.60	-3.0
4,341,131	+		Echvi_3653	0.78	+0.4
4,341,131	+		Echvi_3653	0.78	+1.4
4,341,131	+		Echvi_3653	0.78	+1.4
4,341,132	-		Echvi_3653	0.78	+1.6
4,341,172	+		Echvi_3653	0.82	+0.4
4,341,172	+		Echvi_3653	0.82	+0.7
4,341,172	+		Echvi_3653	0.82	+0.1
4,341,172	+		Echvi_3653	0.82	+0.3
4,341,173	-		Echvi_3653	0.82	+0.3
4,341,173	-		Echvi_3653	0.82	+1.7
4,341,194	+		Echvi_3653	0.85	+0.4
4,341,226	+		Echvi_3653	0.88	+2.1
4,341,226	+		Echvi_3653	0.88	-0.5
4,341,227	-		Echvi_3653	0.89	-0.6
4,341,242	+				-0.9
4,341,262	+				-1.4
4,341,262	+				-0.9
4,341,263	-				+1.0
4,341,263	-				+1.4
4,341,269	-				+2.2
4,341,269	-				+0.3
4,341,275	+				-0.2
4,341,286	+				+0.4
4,341,287	-				-1.1
4,341,421	-		Echvi_3654	0.18	-0.3
4,341,421	-		Echvi_3654	0.18	-0.9
4,341,424	+		Echvi_3654	0.19	-2.8
4,341,427	-		Echvi_3654	0.20	+0.5
4,341,427	-		Echvi_3654	0.20	-0.2
4,341,457	-		Echvi_3654	0.27	-0.3
4,341,457	-		Echvi_3654	0.27	-0.8
4,341,459	+		Echvi_3654	0.28	+1.7
4,341,460	-		Echvi_3654	0.28	+0.3
4,341,474	+		Echvi_3654	0.31	-1.4
4,341,484	+		Echvi_3654	0.34	+0.2
4,341,489	+		Echvi_3654	0.35	-0.5
4,341,510	+		Echvi_3654	0.40	-0.1
4,341,513	-		Echvi_3654	0.41	-0.3
4,341,521	+		Echvi_3654	0.43	+1.1
4,341,523	+		Echvi_3654	0.44	-0.3
4,341,523	+				+1.7
4,341,524	-		Echvi_3654	0.44	+0.7
4,341,543	-		Echvi_3654	0.49	-1.3
4,341,564	+		Echvi_3654	0.54	+0.5
4,341,665	-		Echvi_3654	0.79	+0.2
4,341,665	-		Echvi_3654	0.79	+1.7
4,341,667	-		Echvi_3654	0.80	-1.1
4,341,667	-		Echvi_3654	0.80	+1.0
4,341,736	-				-1.7
4,341,750	-				-1.3
4,341,777	+				+0.4
4,341,778	-				-0.6
4,341,826	-				+0.7
4,341,917	-				-0.9
4,342,094	+		Echvi_3655	0.25	+0.2
4,342,143	+		Echvi_3655	0.29	+0.3
4,342,144	-		Echvi_3655	0.29	+1.2
4,342,174	+		Echvi_3655	0.32	-0.3
4,342,174	+		Echvi_3655	0.32	+0.1
4,342,210	+		Echvi_3655	0.36	+0.5
4,342,288	-		Echvi_3655	0.43	+2.1