Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2881

Experiment: Beta-Lactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose (C)
3,450,402	-		Echvi_2880	0.20	+0.1
3,450,461	+		Echvi_2880	0.26	+1.6
3,450,484	+		Echvi_2880	0.28	+0.3
3,450,485	-		Echvi_2880	0.28	-0.5
3,450,581	+		Echvi_2880	0.37	+1.2
3,450,582	-		Echvi_2880	0.37	-2.4
3,450,599	-		Echvi_2880	0.39	-0.2
3,450,750	-		Echvi_2880	0.53	+0.3
3,450,752	+		Echvi_2880	0.53	+1.2
3,450,753	-		Echvi_2880	0.53	-1.1
3,450,753	-		Echvi_2880	0.53	+1.0
3,450,839	-		Echvi_2880	0.62	-0.4
3,450,907	+		Echvi_2880	0.68	+0.2
3,450,913	-		Echvi_2880	0.69	+0.7
3,450,965	+		Echvi_2880	0.74	+0.1
3,450,975	-		Echvi_2880	0.74	-0.1
3,451,014	+		Echvi_2880	0.78	-2.4
3,451,014	+		Echvi_2880	0.78	+0.9
3,451,014	+		Echvi_2880	0.78	-0.4
3,451,014	+		Echvi_2880	0.78	-1.2
3,451,014	+		Echvi_2880	0.78	-2.1
3,451,015	-		Echvi_2880	0.78	-1.2
3,451,015	-		Echvi_2880	0.78	-0.0
3,451,015	-		Echvi_2880	0.78	+0.8
3,451,015	-		Echvi_2880	0.78	-0.3
3,451,015	-		Echvi_2880	0.78	+0.8
3,451,015	-		Echvi_2880	0.78	-0.2
3,451,020	+		Echvi_2880	0.79	-1.6
3,451,021	-		Echvi_2880	0.79	-2.1
3,451,059	+		Echvi_2880	0.82	-1.6
3,451,060	-		Echvi_2880	0.83	+0.9
3,451,060	-		Echvi_2880	0.83	+0.3
3,451,071	-		Echvi_2880	0.84	-1.6
3,451,089	+		Echvi_2880	0.85	+1.1
3,451,107	-		Echvi_2880	0.87	+0.7
3,451,133	-		Echvi_2880	0.89	+0.8
3,451,139	-				-0.2
3,451,139	-				+0.5
3,451,244	+				+0.6
3,451,257	+				-0.5
3,451,257	+				+0.4
3,451,258	-				-0.1
3,451,261	-				-0.9
3,451,262	+				+0.1
3,451,262	+				+0.8
3,451,262	+				+0.8
3,451,263	-				-1.1
3,451,270	-				-1.8
3,451,289	+				+1.8
3,451,290	-				-1.1
3,451,299	+				-0.7
3,451,299	+				-2.4
3,451,300	-				+0.1
3,451,304	+				+2.2
3,451,314	+				+0.3
3,451,319	-				+0.2
3,451,359	-				-0.8
3,451,382	-				+0.3
3,451,382	-				+0.9
3,451,387	-				-0.8
3,451,416	+				+0.4
3,451,417	-				+0.8
3,451,417	-				+0.8
3,451,434	+				+0.8
3,451,532	+		Echvi_2881	0.18	+0.1
3,451,532	+		Echvi_2881	0.18	-0.4
3,451,532	+		Echvi_2881	0.18	-0.3
3,451,532	+		Echvi_2881	0.18	+0.5
3,451,560	-		Echvi_2881	0.22	+1.4
3,451,665	+		Echvi_2881	0.37	+0.6
3,451,665	+		Echvi_2881	0.37	+0.8
3,451,665	+		Echvi_2881	0.37	-0.6
3,451,665	+		Echvi_2881	0.37	-0.2
3,451,665	+		Echvi_2881	0.37	-0.1
3,451,665	+		Echvi_2881	0.37	+0.5
3,451,665	+		Echvi_2881	0.37	+0.8
3,451,666	-		Echvi_2881	0.37	+1.5
3,451,666	-		Echvi_2881	0.37	+1.9
3,451,666	-		Echvi_2881	0.37	-1.4
3,451,666	-		Echvi_2881	0.37	-2.3
3,451,688	+		Echvi_2881	0.40	-0.9
3,451,688	+		Echvi_2881	0.40	-0.6
3,451,688	+		Echvi_2881	0.40	-0.9
3,451,688	+		Echvi_2881	0.40	+0.8
3,451,688	+		Echvi_2881	0.40	+0.1
3,451,688	+		Echvi_2881	0.40	+0.4
3,451,688	+		Echvi_2881	0.40	+1.8
3,451,688	+		Echvi_2881	0.40	+0.3
3,451,689	-		Echvi_2881	0.40	+1.0
3,451,689	-		Echvi_2881	0.40	+0.5
3,451,689	-		Echvi_2881	0.40	-0.7
3,451,689	-		Echvi_2881	0.40	+0.4
3,451,689	-		Echvi_2881	0.40	-0.2
3,451,689	-		Echvi_2881	0.40	+1.1
3,451,689	-		Echvi_2881	0.40	+1.8
3,451,689	-		Echvi_2881	0.40	-2.1
3,451,689	-		Echvi_2881	0.40	+2.4
3,451,689	-		Echvi_2881	0.40	+0.9
3,451,690	+		Echvi_2881	0.41	-0.4
3,451,691	-		Echvi_2881	0.41	+1.2
3,451,691	-		Echvi_2881	0.41	-0.5
3,451,692	+		Echvi_2881	0.41	+1.4
3,451,692	+		Echvi_2881	0.41	+1.1
3,451,712	+		Echvi_2881	0.44	-1.2
3,451,713	-		Echvi_2881	0.44	+0.4
3,451,713	-		Echvi_2881	0.44	+0.7
3,451,735	-		Echvi_2881	0.47	+1.4
3,451,754	+		Echvi_2881	0.50	-0.4
3,451,758	+		Echvi_2881	0.50	+0.4
3,451,758	+		Echvi_2881	0.50	-1.2
3,451,760	+		Echvi_2881	0.50	-0.2
3,451,776	+		Echvi_2881	0.53	-0.9
3,451,881	+		Echvi_2881	0.67	+0.4
3,451,881	+		Echvi_2881	0.67	+1.1
3,451,907	-		Echvi_2881	0.71	-1.2
3,451,907	-		Echvi_2881	0.71	-1.8
3,451,911	+		Echvi_2881	0.72	-1.2
3,451,911	+		Echvi_2881	0.72	+1.0
3,451,911	+		Echvi_2881	0.72	+0.8
3,452,002	-		Echvi_2881	0.84	-0.2
3,452,029	-		Echvi_2881	0.88	+2.4
3,452,101	+				+0.9
3,452,104	-				-0.4
3,452,111	-				-0.6
3,452,125	-				+1.3
3,452,144	+				-0.1
3,452,145	-				+0.2
3,452,145	-				+0.2
3,452,145	-				-1.6
3,452,147	+				+0.4
3,452,156	+				-0.2
3,452,169	-				-0.1
3,452,199	-				-0.2
3,452,217	+				-0.4
3,452,218	-				-0.9
3,452,327	-				+0.7
3,452,337	+				-2.5
3,452,337	+				-1.0
3,452,338	-				-0.2
3,452,338	-				+0.4
3,452,340	-				+2.4
3,452,340	-				+0.2
3,452,368	-				+1.2
3,452,384	+				-1.4
3,452,447	+				+0.9
3,452,448	-				-1.1
3,452,473	+		Echvi_2882	0.12	-1.2
3,452,480	+		Echvi_2882	0.13	+0.9
3,452,481	-		Echvi_2882	0.14	-0.0
3,452,626	+		Echvi_2882	0.37	-0.2
3,452,670	+		Echvi_2882	0.44	+0.8
3,452,670	+		Echvi_2882	0.44	-0.5
3,452,704	+		Echvi_2882	0.49	+0.1
3,452,704	+		Echvi_2882	0.49	-0.2
3,452,739	+		Echvi_2882	0.55	-0.4
3,452,739	+		Echvi_2882	0.55	-0.1
3,452,741	+		Echvi_2882	0.55	-0.4
3,452,784	-		Echvi_2882	0.62	-2.0
3,452,840	+		Echvi_2882	0.71	+0.4
3,452,847	-		Echvi_2882	0.72	-1.2
3,452,847	-		Echvi_2882	0.72	+0.9
3,452,907	-		Echvi_2882	0.82	+0.6
3,452,999	-				-0.2
3,453,057	-				+1.8
3,453,097	+				-0.6
3,453,097	+				-0.4