Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11380

Experiment: m.b. Nalidixic 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.03 mg/ml
2,635,230	+		CA264_11375	0.27	+0.8
2,635,263	+		CA264_11375	0.37	-1.1
2,635,264	-		CA264_11375	0.37	+2.4
2,635,264	-		CA264_11375	0.37	+1.4
2,635,266	-		CA264_11375	0.38	-0.9
2,635,266	-		CA264_11375	0.38	+0.3
2,635,286	+		CA264_11375	0.44	+0.4
2,635,287	-		CA264_11375	0.44	-1.1
2,635,302	-		CA264_11375	0.49	-0.2
2,635,306	-		CA264_11375	0.50	+0.1
2,635,340	+		CA264_11375	0.60	-1.8
2,635,341	-		CA264_11375	0.60	-0.9
2,635,342	+		CA264_11375	0.61	-1.1
2,635,355	+		CA264_11375	0.65	+0.5
2,635,401	-		CA264_11375	0.78	+1.1
2,635,403	+		CA264_11375	0.79	-0.8
2,635,403	+		CA264_11375	0.79	-1.4
2,635,403	+		CA264_11375	0.79	-0.3
2,635,404	-		CA264_11375	0.79	+1.0
2,635,465	-				-1.8
2,635,465	-				-1.4
2,635,466	+				-0.8
2,635,466	+				-0.5
2,635,467	-				+0.3
2,635,467	-				+0.6
2,635,467	-				+1.4
2,635,467	-				-3.2
2,635,468	+				-0.3
2,635,468	+				+0.9
2,635,468	+				-1.1
2,635,468	+				-0.6
2,635,468	+				-1.1
2,635,469	-				-0.9
2,635,469	-				-1.2
2,635,469	-				-0.1
2,635,472	+				-0.5
2,635,472	+				-1.3
2,635,473	-				-1.8
2,635,473	-				-1.4
2,635,509	-				-0.5
2,635,521	+				-1.4
2,635,521	+				+0.7
2,635,522	-				+0.3
2,635,524	+				+0.7
2,635,533	+				-1.9
2,635,564	+				+0.6
2,635,564	+				-0.1
2,635,565	-				-1.1
2,635,622	+				-0.9
2,635,623	-				-0.7
2,635,623	-				-1.1
2,635,628	-				+1.3
2,635,632	-				-0.4
2,635,637	-				-0.3
2,635,637	-				+0.9
2,635,639	-				-2.5
2,635,639	-				-0.5
2,635,646	-				-1.3
2,635,650	-				-1.2
2,635,650	-				-0.7
2,635,650	-				+0.9
2,635,710	-				-1.8
2,635,763	+				+0.9
2,635,764	-				-0.3
2,635,797	+				-2.9
2,635,798	-				-1.1
2,635,848	+				-0.4
2,635,849	-				+1.1
2,635,849	-				-1.1
2,635,852	+				-1.8
2,635,852	+				-2.0
2,635,853	-				-0.1
2,635,856	+				-0.7
2,635,857	-				-1.6
2,635,857	-				-1.9
2,635,857	-				-1.0
2,635,904	-				-1.5
2,635,920	-				+0.7
2,635,938	-				-0.7
2,635,981	+				-0.4
2,635,982	-				-0.0
2,635,982	-				-0.5
2,635,989	+				+1.7
2,635,990	-				-1.2
2,635,990	-				-0.3
2,635,990	-				-0.6
2,635,993	+				-1.6
2,635,993	+				+0.0
2,635,996	-				-2.0
2,636,023	+				+0.2
2,636,024	-				+0.3
2,636,036	-				-1.6
2,636,036	-				-0.4
2,636,036	-				-0.5
2,636,036	-				-0.8
2,636,037	+				-0.0
2,636,037	+				-0.3
2,636,038	-				-1.2
2,636,038	-				-0.7
2,636,065	-				-2.5
2,636,070	-				-0.7
2,636,070	-				-0.4
2,636,073	-				+0.6
2,636,110	+				+0.8
2,636,110	+				-0.2
2,636,110	+				-1.0
2,636,113	-				-1.4
2,636,120	-				-1.4
2,636,121	+				+0.6
2,636,154	+				-2.5
2,636,156	+				-0.3
2,636,156	+				+0.0
2,636,157	-				-1.0
2,636,162	+				-0.6
2,636,219	+				-0.7
2,636,219	+				-0.9
2,636,220	-				+0.1
2,636,220	-				-0.6
2,636,280	+				-2.5
2,636,281	-				-1.7
2,636,281	-				-0.2
2,636,384	+		CA264_11380	0.12	-1.7
2,636,420	-		CA264_11380	0.14	-2.2
2,636,423	+		CA264_11380	0.14	-1.3
2,636,481	+		CA264_11380	0.18	-1.6
2,636,482	-		CA264_11380	0.18	-0.9
2,636,503	+		CA264_11380	0.19	-0.3
2,636,560	-		CA264_11380	0.23	-3.0
2,636,611	+		CA264_11380	0.26	-1.0
2,636,631	+		CA264_11380	0.28	-2.0
2,636,631	+		CA264_11380	0.28	-1.4
2,636,632	-		CA264_11380	0.28	+1.4
2,636,641	-		CA264_11380	0.28	-0.1
2,636,663	-		CA264_11380	0.30	+0.6
2,636,713	+		CA264_11380	0.33	+0.1
2,636,714	-		CA264_11380	0.33	-0.7
2,636,743	-		CA264_11380	0.35	+1.1
2,636,787	+		CA264_11380	0.38	+0.9
2,636,788	-		CA264_11380	0.38	-0.4
2,636,898	+		CA264_11380	0.45	-0.5
2,636,924	+		CA264_11380	0.47	-1.4
2,636,954	-		CA264_11380	0.49	-0.5
2,636,954	-		CA264_11380	0.49	+1.0
2,636,961	+		CA264_11380	0.49	-0.2
2,636,962	-		CA264_11380	0.49	-1.9
2,637,049	-		CA264_11380	0.55	-0.4
2,637,050	+		CA264_11380	0.55	+0.6
2,637,051	-		CA264_11380	0.55	+0.3
2,637,051	-		CA264_11380	0.55	-0.7
2,637,074	+		CA264_11380	0.57	-2.1
2,637,074	+		CA264_11380	0.57	+0.2
2,637,074	+		CA264_11380	0.57	-1.0
2,637,075	-		CA264_11380	0.57	+0.7
2,637,104	-		CA264_11380	0.59	+0.4
2,637,194	-		CA264_11380	0.65	-0.9
2,637,213	+		CA264_11380	0.66	+1.4
2,637,243	+		CA264_11380	0.68	-0.7
2,637,322	+		CA264_11380	0.73	-1.1
2,637,337	-		CA264_11380	0.74	-1.0
2,637,376	-		CA264_11380	0.76	-1.8
2,637,376	-		CA264_11380	0.76	+0.3
2,637,384	+		CA264_11380	0.77	-1.7
2,637,385	-		CA264_11380	0.77	-0.6
2,637,486	+		CA264_11380	0.84	-1.9
2,637,543	+		CA264_11380	0.87	+0.4
2,637,544	-		CA264_11380	0.87	-0.5
2,637,544	-		CA264_11380	0.87	-1.2
2,637,549	-		CA264_11380	0.88	-1.9
2,637,549	-		CA264_11380	0.88	-0.8
2,637,598	-				-2.0
2,637,716	+				+0.2
2,637,717	-				-1.6
2,637,749	+				+0.1
2,637,750	-				-1.3
2,637,750	-				-1.1
2,637,759	+				+1.7
2,637,771	+				+0.6
2,637,772	-				-1.9
2,637,785	-				-3.0
2,637,785	-				-0.0
2,637,788	+				+1.7
2,637,789	-				-1.2
2,637,812	-				+2.1
2,637,860	+				+0.7
2,637,860	+				+0.2
2,637,862	+				+0.4
2,637,863	-				-1.5
2,637,875	+				+0.1
2,637,925	+				-0.7
2,637,972	+				-2.1
2,637,990	+				-0.4
2,637,991	-				-0.6
2,637,992	+				-2.3
2,637,992	+				+0.4
2,637,993	-				+0.2
2,637,993	-				+0.4
2,637,993	-				-1.4
2,638,068	+				-1.8
2,638,068	+				-2.2
2,638,068	+				-1.0
2,638,069	-				+2.4
2,638,093	+				-1.5
2,638,093	+				-0.2
2,638,094	-				+0.6
2,638,151	-				-1.6
2,638,269	-		CA264_11385	0.19	+0.4
2,638,324	+		CA264_11385	0.36	-0.7
2,638,397	-		CA264_11385	0.59	-0.2
2,638,397	-		CA264_11385	0.59	-0.9
2,638,397	-		CA264_11385	0.59	-0.4
2,638,401	+		CA264_11385	0.60	-1.4
2,638,402	-		CA264_11385	0.60	+0.3
2,638,402	-		CA264_11385	0.60	-0.6
2,638,410	-		CA264_11385	0.63	-0.4
2,638,422	+		CA264_11385	0.67	-2.3
2,638,510	-				+1.1
2,638,510	-				-1.3
2,638,525	-				-2.1
2,638,529	+				-1.9
2,638,530	-				+2.7
2,638,621	-				+0.5
2,638,629	+				-0.2
2,638,630	-				-0.9
2,638,641	+				-1.1
2,638,675	+				+0.6
2,638,675	+				-1.9
2,638,676	-				+2.4
2,638,676	-				-0.5
2,638,676	-				+0.1
2,638,678	+				-3.5
2,638,679	-				-2.2
2,638,700	-				-1.3
2,638,714	-				-0.6
2,638,723	+				-0.9
2,638,724	-				-2.8