Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10800 and CA264_10805 are separated by 160 nucleotides CA264_10805 and CA264_10810 are separated by 97 nucleotides
CA264_10800: CA264_10800 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit, at 2,496,503 to 2,497,258
_10800
CA264_10805: CA264_10805 - NADPH-dependent oxidoreductase, at 2,497,419 to 2,497,943
_10805
CA264_10810: CA264_10810 - cell division protein FtsZ, at 2,498,041 to 2,499,612
_10810
Position (kb)
2497
2498 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2497.328 kb on + strand at 2497.336 kb on - strand at 2497.337 kb on + strand at 2497.337 kb on + strand at 2497.338 kb on - strand at 2497.338 kb on - strand at 2497.360 kb on + strand at 2497.360 kb on + strand at 2497.388 kb on - strand at 2497.388 kb on - strand at 2497.390 kb on - strand at 2497.410 kb on + strand at 2497.415 kb on - strand at 2497.415 kb on - strand at 2497.416 kb on + strand at 2497.418 kb on + strand at 2497.418 kb on + strand at 2497.419 kb on - strand at 2497.432 kb on + strand at 2497.475 kb on - strand, within CA264_10805 at 2497.658 kb on + strand, within CA264_10805 at 2497.659 kb on - strand, within CA264_10805 at 2497.659 kb on - strand, within CA264_10805 at 2497.810 kb on - strand, within CA264_10805 at 2497.883 kb on - strand, within CA264_10805 at 2497.883 kb on - strand, within CA264_10805 at 2497.961 kb on - strand at 2497.961 kb on - strand at 2497.979 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 2,497,328 + -0.0 2,497,336 - +0.9 2,497,337 + -0.2 2,497,337 + -1.5 2,497,338 - -1.2 2,497,338 - -0.1 2,497,360 + -1.7 2,497,360 + -0.9 2,497,388 - +0.7 2,497,388 - +0.6 2,497,390 - +2.4 2,497,410 + -0.7 2,497,415 - +0.1 2,497,415 - +0.1 2,497,416 + -0.8 2,497,418 + +0.7 2,497,418 + -0.7 2,497,419 - +0.9 2,497,432 + +2.7 2,497,475 - CA264_10805 0.11 +3.2 2,497,658 + CA264_10805 0.46 +2.1 2,497,659 - CA264_10805 0.46 +3.6 2,497,659 - CA264_10805 0.46 +3.5 2,497,810 - CA264_10805 0.74 +3.1 2,497,883 - CA264_10805 0.88 +2.7 2,497,883 - CA264_10805 0.88 +2.4 2,497,961 - +2.1 2,497,961 - +2.0 2,497,979 - -1.2
Or see this region's nucleotide sequence