Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07025 and CA264_07030 are separated by 37 nucleotides CA264_07030 and CA264_07035 overlap by 4 nucleotides
CA264_07025: CA264_07025 - inositol-3-phosphate synthase, at 1,619,367 to 1,620,695
_07025
CA264_07030: CA264_07030 - UDP-glucose 4-epimerase, at 1,620,733 to 1,621,725
_07030
CA264_07035: CA264_07035 - hypothetical protein, at 1,621,722 to 1,622,843
_07035
Position (kb)
1620
1621
1622 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1619.761 kb on + strand, within CA264_07025 at 1619.762 kb on - strand, within CA264_07025 at 1619.762 kb on - strand, within CA264_07025 at 1619.882 kb on + strand, within CA264_07025 at 1619.883 kb on - strand, within CA264_07025 at 1619.883 kb on - strand, within CA264_07025 at 1619.985 kb on - strand, within CA264_07025 at 1620.091 kb on + strand, within CA264_07025 at 1620.091 kb on + strand, within CA264_07025 at 1620.181 kb on + strand, within CA264_07025 at 1620.191 kb on + strand, within CA264_07025 at 1620.280 kb on + strand, within CA264_07025 at 1620.280 kb on + strand, within CA264_07025 at 1620.281 kb on - strand, within CA264_07025 at 1620.281 kb on - strand, within CA264_07025 at 1620.284 kb on + strand, within CA264_07025 at 1620.284 kb on + strand, within CA264_07025 at 1620.284 kb on + strand, within CA264_07025 at 1620.328 kb on + strand, within CA264_07025 at 1620.328 kb on + strand, within CA264_07025 at 1620.329 kb on - strand, within CA264_07025 at 1620.434 kb on - strand, within CA264_07025 at 1620.434 kb on - strand, within CA264_07025 at 1620.615 kb on + strand at 1620.616 kb on - strand at 1620.682 kb on - strand at 1620.689 kb on - strand at 1620.724 kb on - strand at 1620.745 kb on - strand at 1620.763 kb on + strand at 1620.986 kb on - strand, within CA264_07030 at 1621.025 kb on + strand, within CA264_07030 at 1621.049 kb on + strand, within CA264_07030 at 1621.050 kb on - strand, within CA264_07030 at 1621.050 kb on - strand, within CA264_07030 at 1621.050 kb on - strand, within CA264_07030 at 1621.113 kb on - strand, within CA264_07030 at 1621.149 kb on - strand, within CA264_07030 at 1621.149 kb on - strand, within CA264_07030 at 1621.149 kb on - strand, within CA264_07030 at 1621.186 kb on - strand, within CA264_07030 at 1621.211 kb on + strand, within CA264_07030 at 1621.265 kb on + strand, within CA264_07030 at 1621.266 kb on - strand, within CA264_07030 at 1621.296 kb on - strand, within CA264_07030 at 1621.331 kb on - strand, within CA264_07030 at 1621.332 kb on + strand, within CA264_07030 at 1621.406 kb on - strand, within CA264_07030 at 1621.514 kb on + strand, within CA264_07030 at 1621.520 kb on + strand, within CA264_07030 at 1621.543 kb on + strand, within CA264_07030 at 1621.579 kb on - strand, within CA264_07030 at 1621.580 kb on + strand, within CA264_07030 at 1621.581 kb on - strand, within CA264_07030 at 1621.581 kb on - strand, within CA264_07030 at 1621.585 kb on + strand, within CA264_07030 at 1621.586 kb on - strand, within CA264_07030 at 1621.637 kb on + strand at 1621.639 kb on + strand at 1621.639 kb on + strand at 1621.640 kb on - strand at 1621.648 kb on - strand at 1621.726 kb on - strand at 1621.748 kb on - strand at 1621.756 kb on + strand at 1621.756 kb on + strand at 1621.757 kb on - strand at 1621.873 kb on + strand, within CA264_07035 at 1621.965 kb on + strand, within CA264_07035 at 1621.966 kb on - strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.970 kb on + strand, within CA264_07035 at 1621.971 kb on - strand, within CA264_07035 at 1621.971 kb on - strand, within CA264_07035 at 1622.026 kb on - strand, within CA264_07035 at 1622.036 kb on + strand, within CA264_07035 at 1622.077 kb on - strand, within CA264_07035 at 1622.126 kb on - strand, within CA264_07035 at 1622.186 kb on - strand, within CA264_07035 at 1622.218 kb on + strand, within CA264_07035 at 1622.218 kb on + strand, within CA264_07035 at 1622.219 kb on - strand, within CA264_07035 at 1622.219 kb on - strand, within CA264_07035 at 1622.250 kb on - strand, within CA264_07035 at 1622.277 kb on + strand, within CA264_07035 at 1622.278 kb on - strand, within CA264_07035 at 1622.308 kb on + strand, within CA264_07035 at 1622.386 kb on + strand, within CA264_07035 at 1622.387 kb on - strand, within CA264_07035 at 1622.392 kb on + strand, within CA264_07035 at 1622.398 kb on + strand, within CA264_07035
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 1,619,761 + CA264_07025 0.30 +0.8 1,619,762 - CA264_07025 0.30 -0.5 1,619,762 - CA264_07025 0.30 -2.5 1,619,882 + CA264_07025 0.39 +1.2 1,619,883 - CA264_07025 0.39 +3.7 1,619,883 - CA264_07025 0.39 -0.1 1,619,985 - CA264_07025 0.47 -0.7 1,620,091 + CA264_07025 0.54 +1.8 1,620,091 + CA264_07025 0.54 -0.4 1,620,181 + CA264_07025 0.61 -0.2 1,620,191 + CA264_07025 0.62 -0.2 1,620,280 + CA264_07025 0.69 +0.3 1,620,280 + CA264_07025 0.69 +1.4 1,620,281 - CA264_07025 0.69 +1.9 1,620,281 - CA264_07025 0.69 -1.3 1,620,284 + CA264_07025 0.69 +0.5 1,620,284 + CA264_07025 0.69 -0.4 1,620,284 + CA264_07025 0.69 +3.2 1,620,328 + CA264_07025 0.72 -0.4 1,620,328 + CA264_07025 0.72 -0.2 1,620,329 - CA264_07025 0.72 +0.8 1,620,434 - CA264_07025 0.80 -0.1 1,620,434 - CA264_07025 0.80 +1.1 1,620,615 + +0.6 1,620,616 - -0.1 1,620,682 - +0.3 1,620,689 - -0.2 1,620,724 - -0.5 1,620,745 - +0.7 1,620,763 + +4.3 1,620,986 - CA264_07030 0.25 +2.5 1,621,025 + CA264_07030 0.29 -0.7 1,621,049 + CA264_07030 0.32 +0.5 1,621,050 - CA264_07030 0.32 +1.1 1,621,050 - CA264_07030 0.32 +0.3 1,621,050 - CA264_07030 0.32 +0.1 1,621,113 - CA264_07030 0.38 +4.1 1,621,149 - CA264_07030 0.42 +3.3 1,621,149 - CA264_07030 0.42 -0.5 1,621,149 - CA264_07030 0.42 +4.2 1,621,186 - CA264_07030 0.46 +1.7 1,621,211 + CA264_07030 0.48 +1.3 1,621,265 + CA264_07030 0.54 +1.9 1,621,266 - CA264_07030 0.54 +2.2 1,621,296 - CA264_07030 0.57 +2.3 1,621,331 - CA264_07030 0.60 +4.0 1,621,332 + CA264_07030 0.60 +4.8 1,621,406 - CA264_07030 0.68 +1.8 1,621,514 + CA264_07030 0.79 -1.5 1,621,520 + CA264_07030 0.79 +0.5 1,621,543 + CA264_07030 0.82 -0.5 1,621,579 - CA264_07030 0.85 +3.0 1,621,580 + CA264_07030 0.85 +2.1 1,621,581 - CA264_07030 0.85 +1.8 1,621,581 - CA264_07030 0.85 +3.6 1,621,585 + CA264_07030 0.86 -0.1 1,621,586 - CA264_07030 0.86 +2.2 1,621,637 + -1.4 1,621,639 + -0.8 1,621,639 + +0.5 1,621,640 - -1.0 1,621,648 - +0.1 1,621,726 - -1.5 1,621,748 - -0.5 1,621,756 + +0.5 1,621,756 + +1.8 1,621,757 - -0.2 1,621,873 + CA264_07035 0.13 +0.2 1,621,965 + CA264_07035 0.22 -2.1 1,621,966 - CA264_07035 0.22 -1.7 1,621,970 + CA264_07035 0.22 -2.5 1,621,970 + CA264_07035 0.22 +0.6 1,621,970 + CA264_07035 0.22 -0.8 1,621,971 - CA264_07035 0.22 -1.3 1,621,971 - CA264_07035 0.22 +0.0 1,622,026 - CA264_07035 0.27 +0.8 1,622,036 + CA264_07035 0.28 +0.6 1,622,077 - CA264_07035 0.32 -0.7 1,622,126 - CA264_07035 0.36 +0.7 1,622,186 - CA264_07035 0.41 +0.8 1,622,218 + CA264_07035 0.44 -1.2 1,622,218 + CA264_07035 0.44 -1.1 1,622,219 - CA264_07035 0.44 -1.1 1,622,219 - CA264_07035 0.44 +0.3 1,622,250 - CA264_07035 0.47 -1.3 1,622,277 + CA264_07035 0.49 -0.2 1,622,278 - CA264_07035 0.50 +0.5 1,622,308 + CA264_07035 0.52 -1.1 1,622,386 + CA264_07035 0.59 -0.8 1,622,387 - CA264_07035 0.59 +0.2 1,622,392 + CA264_07035 0.60 -1.9 1,622,398 + CA264_07035 0.60 -1.2
Or see this region's nucleotide sequence