Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06840

Experiment: m.b. Nalidixic 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.03 mg/ml
1,580,903	-		CA264_06830	0.53	-1.7
1,580,957	+		CA264_06830	0.60	-1.4
1,580,992	+		CA264_06830	0.65	-1.7
1,580,993	-		CA264_06830	0.65	+0.4
1,581,056	-		CA264_06830	0.73	+0.6
1,581,065	-		CA264_06830	0.74	+0.8
1,581,065	-		CA264_06830	0.74	-3.1
1,581,084	+		CA264_06830	0.77	+1.2
1,581,200	+				-1.6
1,581,200	+				+0.5
1,581,200	+				-0.4
1,581,200	+				+0.8
1,581,201	-				+0.1
1,581,201	-				-0.2
1,581,201	-				-0.3
1,581,227	+				+1.4
1,581,235	+				-1.2
1,581,236	-				+1.0
1,581,236	-				+0.9
1,581,241	-				-1.2
1,581,241	-				-1.4
1,581,244	+				-3.2
1,581,245	-				-0.9
1,581,380	+		CA264_06835	0.16	-0.7
1,581,381	-		CA264_06835	0.16	-1.4
1,581,408	+		CA264_06835	0.20	-1.0
1,581,432	-		CA264_06835	0.23	+0.8
1,581,432	-		CA264_06835	0.23	+0.5
1,581,432	-		CA264_06835	0.23	-2.1
1,581,440	+		CA264_06835	0.24	-0.4
1,581,441	-		CA264_06835	0.24	+0.8
1,581,441	-		CA264_06835	0.24	+1.6
1,581,441	-		CA264_06835	0.24	-2.0
1,581,474	-		CA264_06835	0.29	+0.1
1,581,516	-		CA264_06835	0.35	+0.4
1,581,526	-		CA264_06835	0.36	-1.6
1,581,529	-		CA264_06835	0.37	-1.2
1,581,529	-		CA264_06835	0.37	+0.7
1,581,530	+		CA264_06835	0.37	-0.1
1,581,530	+		CA264_06835	0.37	+1.0
1,581,530	+		CA264_06835	0.37	+2.2
1,581,531	-		CA264_06835	0.37	+0.2
1,581,606	-		CA264_06835	0.48	-1.7
1,581,617	-		CA264_06835	0.49	+1.2
1,581,618	+		CA264_06835	0.49	-0.0
1,581,618	+		CA264_06835	0.49	+0.3
1,581,619	-		CA264_06835	0.50	-0.2
1,581,619	-		CA264_06835	0.50	+1.6
1,581,619	-		CA264_06835	0.50	+1.8
1,581,746	+		CA264_06835	0.67	+0.3
1,581,747	-		CA264_06835	0.68	-1.1
1,581,748	+		CA264_06835	0.68	-1.6
1,581,748	+		CA264_06835	0.68	-1.8
1,581,748	+		CA264_06835	0.68	+2.8
1,581,748	+		CA264_06835	0.68	-0.3
1,581,748	+		CA264_06835	0.68	+1.6
1,581,749	-		CA264_06835	0.68	+0.7
1,581,749	-		CA264_06835	0.68	-2.7
1,581,749	-		CA264_06835	0.68	-1.6
1,581,753	+		CA264_06835	0.68	-0.2
1,581,753	+		CA264_06835	0.68	-0.6
1,581,838	-		CA264_06835	0.80	+2.2
1,581,851	+		CA264_06835	0.82	+1.2
1,581,972	+				+1.3
1,581,982	-				-0.8
1,582,067	+		CA264_06840	0.14	-2.1
1,582,072	+		CA264_06840	0.15	+1.4
1,582,073	-		CA264_06840	0.15	-2.3
1,582,128	-		CA264_06840	0.19	-0.9
1,582,128	-		CA264_06840	0.19	-1.1
1,582,188	+		CA264_06840	0.23	-0.4
1,582,188	+		CA264_06840	0.23	-0.1
1,582,189	-		CA264_06840	0.23	-1.1
1,582,189	-		CA264_06840	0.23	-1.8
1,582,189	-		CA264_06840	0.23	+0.3
1,582,201	-		CA264_06840	0.24	-0.8
1,582,201	-		CA264_06840	0.24	-1.1
1,582,201	-		CA264_06840	0.24	-1.8
1,582,399	+		CA264_06840	0.39	+0.3
1,582,512	+		CA264_06840	0.47	-0.2
1,582,512	+		CA264_06840	0.47	-0.5
1,582,549	+		CA264_06840	0.50	+1.6
1,582,549	+		CA264_06840	0.50	+1.5
1,582,550	-		CA264_06840	0.50	-1.1
1,582,550	-		CA264_06840	0.50	-1.3
1,582,550	-		CA264_06840	0.50	+0.5
1,582,554	+		CA264_06840	0.50	-0.2
1,582,554	+		CA264_06840	0.50	+0.0
1,582,555	-		CA264_06840	0.51	+0.8
1,582,555	-		CA264_06840	0.51	-1.8
1,582,560	+		CA264_06840	0.51	+0.8
1,582,582	+		CA264_06840	0.53	-1.0
1,582,582	+		CA264_06840	0.53	-0.8
1,582,582	+		CA264_06840	0.53	+2.2
1,582,583	-		CA264_06840	0.53	-2.7
1,582,659	-		CA264_06840	0.58	-0.3
1,582,695	-		CA264_06840	0.61	-1.4
1,582,706	-		CA264_06840	0.62	+0.8
1,582,706	-		CA264_06840	0.62	-1.5
1,582,713	+		CA264_06840	0.62	-1.8
1,582,767	-		CA264_06840	0.66	-0.3
1,582,769	+		CA264_06840	0.66	+1.2
1,582,853	+		CA264_06840	0.73	+0.1
1,582,877	+		CA264_06840	0.74	-1.6
1,582,877	+		CA264_06840	0.74	-1.7
1,582,878	-		CA264_06840	0.74	-2.1
1,582,899	+		CA264_06840	0.76	+0.3
1,582,899	+		CA264_06840	0.76	+1.2
1,582,941	-		CA264_06840	0.79	+1.1
1,582,944	+		CA264_06840	0.79	-0.4
1,582,964	+		CA264_06840	0.81	+0.2
1,582,964	+		CA264_06840	0.81	+1.4
1,582,999	+		CA264_06840	0.83	-0.8
1,583,012	+		CA264_06840	0.84	-0.9
1,583,021	-		CA264_06840	0.85	-2.7
1,583,035	-		CA264_06840	0.86	+1.8
1,583,067	-		CA264_06840	0.88	+0.2
1,583,120	-				-0.6
1,583,139	-				+1.4
1,583,172	-				-1.1
1,583,189	+				-0.0
1,583,190	-				-0.2
1,583,190	-				+0.2
1,583,192	-				-1.2
1,583,396	+		CA264_06845	0.41	+1.3
1,583,397	-		CA264_06845	0.41	+1.8
1,583,405	+		CA264_06845	0.43	-0.5
1,583,590	-		CA264_06845	0.83	-0.4
1,583,590	-		CA264_06845	0.83	-0.9
1,583,637	+				-0.2
1,583,638	-				-0.1
1,583,640	-				-1.1
1,583,657	-				+0.5
1,583,750	+		CA264_06850	0.11	+2.2
1,583,750	+		CA264_06850	0.11	-0.0
1,583,751	-		CA264_06850	0.11	+0.5
1,583,752	+		CA264_06850	0.11	-1.5
1,583,753	-		CA264_06850	0.12	-2.6
1,583,766	-		CA264_06850	0.14	-0.1
1,583,767	+		CA264_06850	0.14	+0.8
1,583,767	+		CA264_06850	0.14	-0.7
1,583,767	+		CA264_06850	0.14	-2.5
1,583,768	-		CA264_06850	0.14	-0.9
1,583,771	+		CA264_06850	0.15	-0.2
1,583,772	-		CA264_06850	0.15	+2.5
1,583,773	+		CA264_06850	0.15	-0.5
1,583,773	+		CA264_06850	0.15	-0.7
1,583,774	-		CA264_06850	0.15	-1.7
1,583,844	+		CA264_06850	0.27	-2.0
1,583,863	+		CA264_06850	0.30	-1.6
1,583,863	+		CA264_06850	0.30	-0.1
1,583,913	+		CA264_06850	0.38	-0.7
1,583,913	+		CA264_06850	0.38	-0.0
1,583,913	+		CA264_06850	0.38	-0.3
1,583,914	-		CA264_06850	0.39	-0.0
1,583,921	+		CA264_06850	0.40	+3.2
1,583,986	+		CA264_06850	0.51	+1.6
1,584,015	-		CA264_06850	0.55	+1.8
1,584,042	+		CA264_06850	0.60	+1.1
1,584,043	-		CA264_06850	0.60	+0.4
1,584,056	-		CA264_06850	0.62	-0.2
1,584,090	+		CA264_06850	0.68	+0.6
1,584,121	+		CA264_06850	0.73	-0.5
1,584,124	-		CA264_06850	0.74	-1.6