Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05960

Experiment: m.b. Nalidixic 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.03 mg/ml
1,391,324	-		CA264_05955	0.25	-0.5
1,391,365	+		CA264_05955	0.30	-0.1
1,391,419	+		CA264_05955	0.37	+0.9
1,391,505	+		CA264_05955	0.49	+1.3
1,391,505	+		CA264_05955	0.49	+0.9
1,391,505	+		CA264_05955	0.49	-1.4
1,391,505	+		CA264_05955	0.49	+0.9
1,391,506	-		CA264_05955	0.49	-1.4
1,391,506	-		CA264_05955	0.49	+1.4
1,391,700	+		CA264_05955	0.75	-0.1
1,391,737	-		CA264_05955	0.80	-1.2
1,391,782	-		CA264_05955	0.86	+0.4
1,391,782	-		CA264_05955	0.86	-0.4
1,391,856	-				+1.1
1,391,863	-				-0.4
1,391,863	-				-2.1
1,391,885	+				-0.8
1,391,886	-				-0.9
1,391,886	-				-0.3
1,391,886	-				-0.5
1,391,886	-				-0.1
1,391,886	-				-0.4
1,391,894	+				-0.9
1,391,895	-				-1.0
1,391,895	-				+0.0
1,391,907	+				+0.1
1,391,907	+				-0.6
1,391,917	+				-0.6
1,391,923	+				+0.7
1,391,923	+				+1.4
1,391,924	-				-1.0
1,391,924	-				+0.6
1,391,924	-				+0.3
1,391,942	+				-2.7
1,391,942	+				+0.7
1,392,009	+				+0.6
1,392,110	+				-1.6
1,392,147	+				-2.1
1,392,161	-				-1.2
1,392,196	+				+0.2
1,392,197	-				+2.0
1,392,197	-				+0.1
1,392,204	+				+0.2
1,392,230	+				+2.0
1,392,230	+				+1.0
1,392,231	-				+1.7
1,392,231	-				-2.0
1,392,292	+				-1.9
1,392,292	+				-0.4
1,392,292	+				-1.2
1,392,293	-				-1.7
1,392,293	-				+0.5
1,392,461	+		CA264_05960	0.17	+0.3
1,392,461	+		CA264_05960	0.17	-1.4
1,392,519	-		CA264_05960	0.21	-0.8
1,392,524	+		CA264_05960	0.21	-1.7
1,392,524	+		CA264_05960	0.21	+1.4
1,392,525	-		CA264_05960	0.21	+1.0
1,392,525	-		CA264_05960	0.21	-1.1
1,392,788	+		CA264_05960	0.39	-0.2
1,392,789	-		CA264_05960	0.39	+0.6
1,392,981	+		CA264_05960	0.52	+0.9
1,393,022	+		CA264_05960	0.55	-1.5
1,393,087	+		CA264_05960	0.60	+0.6
1,393,103	-		CA264_05960	0.61	+0.9
1,393,359	-		CA264_05960	0.78	-0.3
1,393,359	-		CA264_05960	0.78	+0.9
1,393,370	+		CA264_05960	0.79	-0.8
1,393,370	+		CA264_05960	0.79	-0.9
1,393,371	-		CA264_05960	0.79	+0.5
1,393,385	+		CA264_05960	0.80	-0.7
1,393,385	+		CA264_05960	0.80	-1.6
1,393,393	-		CA264_05960	0.81	-0.2
1,393,393	-		CA264_05960	0.81	+0.1
1,393,400	-		CA264_05960	0.81	+0.2
1,393,400	-		CA264_05960	0.81	-0.7
1,393,414	+		CA264_05960	0.82	-0.3
1,393,415	-		CA264_05960	0.82	-0.1
1,393,424	-		CA264_05960	0.83	-0.9
1,393,563	-				+1.4
1,393,569	+				+2.4
1,393,643	-				-0.7
1,393,643	-				+0.5
1,393,712	-				+0.7
1,393,748	+				-2.9
1,393,749	-				-0.5
1,393,786	+				+0.2
1,393,786	+				+1.0
1,393,786	+				+1.2
1,393,806	+				+1.4
1,393,806	+				-1.0
1,393,817	+				-1.2
1,393,818	-				-0.4
1,393,842	+				+1.4
1,393,842	+				-2.3
1,393,843	-				-0.3
1,393,843	-				-1.3
1,393,843	-				+0.1
1,393,844	+				+1.9
1,393,845	-				+1.4
1,393,845	-				-0.5
1,393,854	+				-1.2
1,393,856	+				-0.1
1,393,904	+				+1.6
1,393,931	-		CA264_05965	0.11	+0.0
1,393,931	-		CA264_05965	0.11	-1.0
1,393,983	+		CA264_05965	0.16	-1.0
1,393,984	-		CA264_05965	0.16	+0.3
1,394,016	+		CA264_05965	0.20	-0.6
1,394,088	+		CA264_05965	0.26	+0.4
1,394,141	-		CA264_05965	0.32	+0.2
1,394,183	+		CA264_05965	0.36	-2.8
1,394,184	-		CA264_05965	0.36	-0.4
1,394,184	-		CA264_05965	0.36	-0.9
1,394,185	+		CA264_05965	0.36	+1.6
1,394,185	+		CA264_05965	0.36	+0.4
1,394,186	-		CA264_05965	0.36	-1.0
1,394,188	+		CA264_05965	0.36	-0.7
1,394,188	+		CA264_05965	0.36	-1.2
1,394,189	-		CA264_05965	0.36	-0.9
1,394,189	-		CA264_05965	0.36	+0.0
1,394,236	+		CA264_05965	0.41	+0.3
1,394,246	-		CA264_05965	0.42	-0.3
1,394,246	-		CA264_05965	0.42	-0.1
1,394,266	+		CA264_05965	0.44	+0.2
1,394,272	+		CA264_05965	0.44	-1.3
1,394,272	+		CA264_05965	0.44	-0.5
1,394,272	+		CA264_05965	0.44	-1.9
1,394,273	-		CA264_05965	0.44	-0.2
1,394,273	-		CA264_05965	0.44	-1.1
1,394,273	-		CA264_05965	0.44	+0.3
1,394,327	-		CA264_05965	0.49	-1.0
1,394,337	-		CA264_05965	0.50	-2.6
1,394,433	+		CA264_05965	0.60	+0.5
1,394,462	+		CA264_05965	0.62	+0.7
1,394,463	-		CA264_05965	0.62	-0.4
1,394,474	-		CA264_05965	0.63	-0.0
1,394,533	-		CA264_05965	0.69	+0.6
1,394,560	+		CA264_05965	0.72	+0.2
1,394,630	-		CA264_05965	0.78	-1.9
1,394,669	+		CA264_05965	0.82	+1.2
1,394,670	-		CA264_05965	0.82	-1.3