Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05955

Experiment: m.b. Nalidixic 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.03 mg/ml
1,390,234	-		CA264_05950	0.39	-0.3
1,390,308	+		CA264_05950	0.46	-0.6
1,390,342	+		CA264_05950	0.50	+1.7
1,390,342	+		CA264_05950	0.50	+0.9
1,390,342	+		CA264_05950	0.50	-0.4
1,390,343	-		CA264_05950	0.50	-1.3
1,390,474	-		CA264_05950	0.63	-1.0
1,390,474	-		CA264_05950	0.63	+0.9
1,390,474	-		CA264_05950	0.63	+0.6
1,390,476	+		CA264_05950	0.63	+1.0
1,390,476	+		CA264_05950	0.63	-1.4
1,390,477	-		CA264_05950	0.63	+0.1
1,390,477	-		CA264_05950	0.63	+0.2
1,390,478	+		CA264_05950	0.64	+0.3
1,390,479	-		CA264_05950	0.64	+1.0
1,390,479	-		CA264_05950	0.64	-0.2
1,390,479	-		CA264_05950	0.64	-2.4
1,390,494	-		CA264_05950	0.65	-0.5
1,390,532	+		CA264_05950	0.69	+0.4
1,390,533	-		CA264_05950	0.69	+0.1
1,390,634	-		CA264_05950	0.79	-0.8
1,390,721	+		CA264_05950	0.88	-3.8
1,390,721	+		CA264_05950	0.88	-0.4
1,390,722	-		CA264_05950	0.88	-1.7
1,390,722	-		CA264_05950	0.88	-1.3
1,390,758	+				-2.6
1,390,758	+				-2.7
1,390,759	-				+0.5
1,390,821	-				-2.6
1,390,840	+				+0.3
1,390,841	-				-0.3
1,390,843	-				-0.8
1,390,843	-				-1.3
1,390,850	+				-0.7
1,390,905	-				-0.6
1,390,911	-				+0.5
1,390,941	+				+1.6
1,391,040	+				+1.0
1,391,088	-				-1.2
1,391,324	-		CA264_05955	0.25	-0.5
1,391,365	+		CA264_05955	0.30	-0.1
1,391,419	+		CA264_05955	0.37	+0.9
1,391,505	+		CA264_05955	0.49	+1.3
1,391,505	+		CA264_05955	0.49	+0.9
1,391,505	+		CA264_05955	0.49	-1.4
1,391,505	+		CA264_05955	0.49	+0.9
1,391,506	-		CA264_05955	0.49	-1.4
1,391,506	-		CA264_05955	0.49	+1.4
1,391,700	+		CA264_05955	0.75	-0.1
1,391,737	-		CA264_05955	0.80	-1.2
1,391,782	-		CA264_05955	0.86	+0.4
1,391,782	-		CA264_05955	0.86	-0.4
1,391,856	-				+1.1
1,391,863	-				-0.4
1,391,863	-				-2.1
1,391,885	+				-0.8
1,391,886	-				-0.9
1,391,886	-				-0.3
1,391,886	-				-0.5
1,391,886	-				-0.1
1,391,886	-				-0.4
1,391,894	+				-0.9
1,391,895	-				-1.0
1,391,895	-				+0.0
1,391,907	+				+0.1
1,391,907	+				-0.6
1,391,917	+				-0.6
1,391,923	+				+0.7
1,391,923	+				+1.4
1,391,924	-				-1.0
1,391,924	-				+0.6
1,391,924	-				+0.3
1,391,942	+				-2.7
1,391,942	+				+0.7
1,392,009	+				+0.6
1,392,110	+				-1.6
1,392,147	+				-2.1
1,392,161	-				-1.2
1,392,196	+				+0.2
1,392,197	-				+2.0
1,392,197	-				+0.1
1,392,204	+				+0.2
1,392,230	+				+2.0
1,392,230	+				+1.0
1,392,231	-				+1.7
1,392,231	-				-2.0
1,392,292	+				-1.9
1,392,292	+				-0.4
1,392,292	+				-1.2
1,392,293	-				-1.7
1,392,293	-				+0.5
1,392,461	+		CA264_05960	0.17	+0.3
1,392,461	+		CA264_05960	0.17	-1.4
1,392,519	-		CA264_05960	0.21	-0.8
1,392,524	+		CA264_05960	0.21	-1.7
1,392,524	+		CA264_05960	0.21	+1.4
1,392,525	-		CA264_05960	0.21	+1.0
1,392,525	-		CA264_05960	0.21	-1.1
1,392,788	+		CA264_05960	0.39	-0.2
1,392,789	-		CA264_05960	0.39	+0.6