Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04230 and CA264_04235 are separated by 4 nucleotides CA264_04235 and CA264_04240 are separated by 231 nucleotides CA264_04240 and CA264_04245 overlap by 31 nucleotides
CA264_04230: CA264_04230 - NADH:ubiquinone oxidoreductase subunit J, at 977,507 to 978,043
_04230
CA264_04235: CA264_04235 - NADH-quinone oxidoreductase subunit I, at 978,048 to 978,563
_04235
CA264_04240: CA264_04240 - NADH-quinone oxidoreductase subunit H, at 978,795 to 979,757
_04240
CA264_04245: CA264_04245 - NADH-quinone oxidoreductase subunit G, at 979,727 to 982,456
_04245
Position (kb) 978
979
980 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 978.050 kb on - strand at 978.057 kb on + strand at 978.058 kb on - strand at 978.058 kb on - strand at 978.058 kb on - strand at 978.058 kb on - strand at 978.139 kb on + strand, within CA264_04235 at 978.139 kb on + strand, within CA264_04235 at 978.140 kb on - strand, within CA264_04235 at 978.142 kb on + strand, within CA264_04235 at 978.142 kb on + strand, within CA264_04235 at 978.143 kb on - strand, within CA264_04235 at 978.143 kb on - strand, within CA264_04235 at 978.148 kb on + strand, within CA264_04235 at 978.196 kb on + strand, within CA264_04235 at 978.256 kb on + strand, within CA264_04235 at 978.256 kb on + strand, within CA264_04235 at 978.280 kb on + strand, within CA264_04235 at 978.376 kb on - strand, within CA264_04235 at 978.494 kb on - strand, within CA264_04235 at 978.543 kb on - strand at 978.557 kb on + strand at 978.563 kb on + strand at 978.564 kb on - strand at 978.564 kb on - strand at 978.586 kb on + strand at 978.588 kb on + strand at 978.641 kb on + strand at 978.641 kb on + strand at 978.664 kb on + strand at 978.748 kb on - strand at 978.771 kb on + strand at 978.778 kb on - strand at 978.953 kb on + strand, within CA264_04240 at 978.954 kb on - strand, within CA264_04240 at 979.009 kb on + strand, within CA264_04240 at 979.009 kb on + strand, within CA264_04240 at 979.010 kb on - strand, within CA264_04240 at 979.051 kb on + strand, within CA264_04240 at 979.383 kb on + strand, within CA264_04240 at 979.383 kb on + strand, within CA264_04240 at 979.385 kb on + strand, within CA264_04240 at 979.385 kb on + strand, within CA264_04240 at 979.385 kb on + strand, within CA264_04240 at 979.385 kb on + strand, within CA264_04240 at 979.386 kb on - strand, within CA264_04240 at 979.386 kb on - strand, within CA264_04240 at 979.393 kb on + strand, within CA264_04240 at 979.393 kb on + strand, within CA264_04240 at 979.394 kb on - strand, within CA264_04240 at 979.394 kb on - strand, within CA264_04240 at 979.499 kb on + strand, within CA264_04240 at 979.569 kb on - strand, within CA264_04240 at 979.637 kb on - strand, within CA264_04240 at 979.637 kb on - strand, within CA264_04240 at 979.680 kb on - strand at 979.775 kb on + strand at 979.853 kb on - strand at 979.853 kb on - strand at 979.865 kb on - strand at 979.897 kb on + strand at 979.897 kb on + strand at 979.898 kb on - strand at 979.963 kb on - strand at 979.963 kb on - strand at 979.976 kb on - strand at 980.046 kb on + strand, within CA264_04245 at 980.047 kb on - strand, within CA264_04245 at 980.424 kb on - strand, within CA264_04245 at 980.453 kb on - strand, within CA264_04245 at 980.466 kb on + strand, within CA264_04245 at 980.719 kb on + strand, within CA264_04245
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 978,050 - +0.7 978,057 + -2.8 978,058 - -0.8 978,058 - -1.8 978,058 - -0.4 978,058 - -2.6 978,139 + CA264_04235 0.18 +1.2 978,139 + CA264_04235 0.18 +0.6 978,140 - CA264_04235 0.18 +2.6 978,142 + CA264_04235 0.18 -1.0 978,142 + CA264_04235 0.18 -0.3 978,143 - CA264_04235 0.18 -2.0 978,143 - CA264_04235 0.18 +0.3 978,148 + CA264_04235 0.19 -0.6 978,196 + CA264_04235 0.29 -1.1 978,256 + CA264_04235 0.40 +2.8 978,256 + CA264_04235 0.40 +1.8 978,280 + CA264_04235 0.45 -0.7 978,376 - CA264_04235 0.64 -0.2 978,494 - CA264_04235 0.86 -2.2 978,543 - -1.5 978,557 + -0.2 978,563 + +1.3 978,564 - -0.4 978,564 - +0.3 978,586 + -0.4 978,588 + +0.2 978,641 + -1.0 978,641 + -0.1 978,664 + -0.1 978,748 - +0.5 978,771 + +3.0 978,778 - -1.6 978,953 + CA264_04240 0.16 -1.4 978,954 - CA264_04240 0.17 -1.9 979,009 + CA264_04240 0.22 +1.2 979,009 + CA264_04240 0.22 +1.6 979,010 - CA264_04240 0.22 -1.7 979,051 + CA264_04240 0.27 -0.6 979,383 + CA264_04240 0.61 -0.5 979,383 + CA264_04240 0.61 -0.8 979,385 + CA264_04240 0.61 -0.2 979,385 + CA264_04240 0.61 -0.9 979,385 + CA264_04240 0.61 -1.5 979,385 + CA264_04240 0.61 -0.4 979,386 - CA264_04240 0.61 -0.7 979,386 - CA264_04240 0.61 +1.7 979,393 + CA264_04240 0.62 -1.6 979,393 + CA264_04240 0.62 -0.1 979,394 - CA264_04240 0.62 -1.8 979,394 - CA264_04240 0.62 +1.4 979,499 + CA264_04240 0.73 -1.0 979,569 - CA264_04240 0.80 +1.0 979,637 - CA264_04240 0.87 -1.7 979,637 - CA264_04240 0.87 -0.3 979,680 - -0.2 979,775 + +0.6 979,853 - -2.1 979,853 - -1.6 979,865 - +0.7 979,897 + -1.9 979,897 + -0.5 979,898 - -0.7 979,963 - -2.1 979,963 - +1.7 979,976 - -1.1 980,046 + CA264_04245 0.12 -1.6 980,047 - CA264_04245 0.12 -0.6 980,424 - CA264_04245 0.26 -0.2 980,453 - CA264_04245 0.27 -1.2 980,466 + CA264_04245 0.27 +0.8 980,719 + CA264_04245 0.36 -1.3
Or see this region's nucleotide sequence