Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04125 and CA264_04130 are separated by 935 nucleotides CA264_04130 and CA264_04135 are separated by 15 nucleotides CA264_04135 and CA264_04140 are separated by 60 nucleotides
CA264_04125: CA264_04125 - hypothetical protein, at 955,610 to 955,945
_04125
CA264_04130: CA264_04130 - hypothetical protein, at 956,881 to 957,735
_04130
CA264_04135: CA264_04135 - hypothetical protein, at 957,751 to 958,164
_04135
CA264_04140: CA264_04140 - cyanophycinase, at 958,225 to 959,118
_04140
Position (kb)
956
957
958 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 955.943 kb on + strand at 955.944 kb on - strand at 955.944 kb on - strand at 955.989 kb on + strand at 956.024 kb on + strand at 956.025 kb on - strand at 956.101 kb on + strand at 956.102 kb on - strand at 956.105 kb on + strand at 956.105 kb on + strand at 956.123 kb on + strand at 956.123 kb on + strand at 956.123 kb on + strand at 956.123 kb on + strand at 956.124 kb on - strand at 956.124 kb on - strand at 956.168 kb on - strand at 956.173 kb on + strand at 956.173 kb on + strand at 956.174 kb on - strand at 956.174 kb on - strand at 956.174 kb on - strand at 956.191 kb on + strand at 956.191 kb on + strand at 956.192 kb on - strand at 956.219 kb on + strand at 956.240 kb on - strand at 956.345 kb on + strand at 956.422 kb on + strand at 956.423 kb on - strand at 956.496 kb on - strand at 956.504 kb on - strand at 956.507 kb on - strand at 956.520 kb on - strand at 956.527 kb on - strand at 956.527 kb on - strand at 956.573 kb on - strand at 956.625 kb on + strand at 956.625 kb on + strand at 956.625 kb on + strand at 956.625 kb on + strand at 956.626 kb on - strand at 956.626 kb on - strand at 956.627 kb on + strand at 956.627 kb on + strand at 956.627 kb on + strand at 956.628 kb on - strand at 956.628 kb on - strand at 956.628 kb on - strand at 956.668 kb on + strand at 956.693 kb on + strand at 956.698 kb on - strand at 956.698 kb on - strand at 956.715 kb on + strand at 956.715 kb on + strand at 956.716 kb on - strand at 956.721 kb on + strand at 956.770 kb on - strand at 956.770 kb on - strand at 956.852 kb on + strand at 956.858 kb on + strand at 956.922 kb on + strand at 956.929 kb on + strand at 956.978 kb on - strand, within CA264_04130 at 956.991 kb on - strand, within CA264_04130 at 957.045 kb on + strand, within CA264_04130 at 957.050 kb on - strand, within CA264_04130 at 957.201 kb on + strand, within CA264_04130 at 957.201 kb on + strand, within CA264_04130 at 957.208 kb on - strand, within CA264_04130 at 957.219 kb on + strand, within CA264_04130 at 957.273 kb on + strand, within CA264_04130 at 957.353 kb on + strand, within CA264_04130 at 957.354 kb on - strand, within CA264_04130 at 957.586 kb on + strand, within CA264_04130 at 957.591 kb on + strand, within CA264_04130 at 957.733 kb on + strand at 957.847 kb on - strand, within CA264_04135 at 957.847 kb on - strand, within CA264_04135 at 957.848 kb on + strand, within CA264_04135 at 957.848 kb on + strand, within CA264_04135 at 957.849 kb on - strand, within CA264_04135 at 957.849 kb on - strand, within CA264_04135 at 957.856 kb on + strand, within CA264_04135 at 957.856 kb on + strand, within CA264_04135 at 957.875 kb on - strand, within CA264_04135 at 957.949 kb on + strand, within CA264_04135 at 958.077 kb on + strand, within CA264_04135 at 958.078 kb on - strand, within CA264_04135 at 958.146 kb on + strand at 958.147 kb on - strand at 958.166 kb on - strand at 958.173 kb on + strand at 958.174 kb on - strand at 958.195 kb on + strand at 958.197 kb on + strand at 958.211 kb on + strand at 958.212 kb on - strand at 958.242 kb on - strand at 958.255 kb on - strand at 958.302 kb on - strand at 958.399 kb on - strand, within CA264_04140 at 958.497 kb on - strand, within CA264_04140 at 958.568 kb on + strand, within CA264_04140 at 958.569 kb on - strand, within CA264_04140 at 958.571 kb on + strand, within CA264_04140 at 958.670 kb on - strand, within CA264_04140 at 958.671 kb on + strand, within CA264_04140 at 958.671 kb on + strand, within CA264_04140 at 958.672 kb on - strand, within CA264_04140 at 958.685 kb on + strand, within CA264_04140 at 958.685 kb on + strand, within CA264_04140 at 958.686 kb on - strand, within CA264_04140 at 958.686 kb on - strand, within CA264_04140
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 955,943 + -1.8 955,944 - +0.7 955,944 - -2.1 955,989 + +1.2 956,024 + -1.5 956,025 - -0.1 956,101 + +0.2 956,102 - +1.0 956,105 + -0.2 956,105 + +0.8 956,123 + +0.6 956,123 + +2.0 956,123 + -1.1 956,123 + -0.6 956,124 - +1.2 956,124 - +4.0 956,168 - +1.2 956,173 + -0.0 956,173 + -0.0 956,174 - -0.2 956,174 - -1.2 956,174 - -1.3 956,191 + +3.0 956,191 + +1.0 956,192 - -1.3 956,219 + +0.6 956,240 - +0.6 956,345 + +0.6 956,422 + -0.9 956,423 - -1.9 956,496 - +0.7 956,504 - +0.0 956,507 - +1.4 956,520 - -1.2 956,527 - +3.2 956,527 - -0.1 956,573 - +0.4 956,625 + -1.6 956,625 + +0.9 956,625 + -1.5 956,625 + -0.4 956,626 - +0.4 956,626 - -2.0 956,627 + -0.6 956,627 + +0.0 956,627 + -1.5 956,628 - -0.2 956,628 - +0.0 956,628 - -2.7 956,668 + +0.6 956,693 + -0.5 956,698 - -0.9 956,698 - -2.2 956,715 + +1.0 956,715 + +0.3 956,716 - +0.5 956,721 + +1.3 956,770 - -1.1 956,770 - -3.1 956,852 + +0.2 956,858 + -0.4 956,922 + -0.4 956,929 + +0.1 956,978 - CA264_04130 0.11 +2.6 956,991 - CA264_04130 0.13 -0.7 957,045 + CA264_04130 0.19 -0.3 957,050 - CA264_04130 0.20 -0.8 957,201 + CA264_04130 0.37 -0.7 957,201 + CA264_04130 0.37 -0.8 957,208 - CA264_04130 0.38 -2.0 957,219 + CA264_04130 0.40 -0.1 957,273 + CA264_04130 0.46 +0.6 957,353 + CA264_04130 0.55 +0.6 957,354 - CA264_04130 0.55 -0.7 957,586 + CA264_04130 0.82 +1.2 957,591 + CA264_04130 0.83 +0.6 957,733 + -2.4 957,847 - CA264_04135 0.23 +0.3 957,847 - CA264_04135 0.23 +0.3 957,848 + CA264_04135 0.23 +0.7 957,848 + CA264_04135 0.23 +0.9 957,849 - CA264_04135 0.24 -0.7 957,849 - CA264_04135 0.24 +0.1 957,856 + CA264_04135 0.25 -0.9 957,856 + CA264_04135 0.25 +1.0 957,875 - CA264_04135 0.30 -0.5 957,949 + CA264_04135 0.48 -1.6 958,077 + CA264_04135 0.79 -0.6 958,078 - CA264_04135 0.79 +0.6 958,146 + +0.3 958,147 - -1.3 958,166 - -0.9 958,173 + -2.1 958,174 - -0.4 958,195 + -0.4 958,197 + -0.4 958,211 + -1.4 958,212 - -1.2 958,242 - +0.6 958,255 - -0.0 958,302 - -0.3 958,399 - CA264_04140 0.19 -0.4 958,497 - CA264_04140 0.30 -0.6 958,568 + CA264_04140 0.38 -1.3 958,569 - CA264_04140 0.38 -0.1 958,571 + CA264_04140 0.39 +1.5 958,670 - CA264_04140 0.50 +0.9 958,671 + CA264_04140 0.50 -0.6 958,671 + CA264_04140 0.50 -1.0 958,672 - CA264_04140 0.50 +1.3 958,685 + CA264_04140 0.51 -3.3 958,685 + CA264_04140 0.51 +1.2 958,686 - CA264_04140 0.52 -0.7 958,686 - CA264_04140 0.52 -0.1
Or see this region's nucleotide sequence