Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03965 and CA264_03970 are separated by 178 nucleotides CA264_03970 and CA264_03975 are separated by 172 nucleotides CA264_03975 and CA264_03980 are separated by 25 nucleotides
CA264_03965: CA264_03965 - hypothetical protein, at 919,208 to 919,765
_03965
CA264_03970: CA264_03970 - hypothetical protein, at 919,944 to 920,564
_03970
CA264_03975: CA264_03975 - hypothetical protein, at 920,737 to 921,765
_03975
CA264_03980: CA264_03980 - hypothetical protein, at 921,791 to 924,523
_03980
Position (kb) 920
921
922 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 919.746 kb on + strand at 919.756 kb on - strand at 919.769 kb on + strand at 919.769 kb on + strand at 919.769 kb on + strand at 919.788 kb on - strand at 919.789 kb on + strand at 919.790 kb on - strand at 920.052 kb on + strand, within CA264_03970 at 920.053 kb on - strand, within CA264_03970 at 920.053 kb on - strand, within CA264_03970 at 920.059 kb on - strand, within CA264_03970 at 920.255 kb on + strand, within CA264_03970 at 920.255 kb on + strand, within CA264_03970 at 920.256 kb on - strand, within CA264_03970 at 920.256 kb on - strand, within CA264_03970 at 920.259 kb on + strand, within CA264_03970 at 920.261 kb on + strand, within CA264_03970 at 920.455 kb on - strand, within CA264_03970 at 920.463 kb on - strand, within CA264_03970 at 920.471 kb on - strand, within CA264_03970 at 920.514 kb on - strand at 920.514 kb on - strand at 920.563 kb on - strand at 920.598 kb on + strand at 920.598 kb on + strand at 920.602 kb on + strand at 920.602 kb on + strand at 920.603 kb on - strand at 920.603 kb on - strand at 920.657 kb on - strand at 920.759 kb on - strand at 920.855 kb on + strand, within CA264_03975 at 920.881 kb on + strand, within CA264_03975 at 921.083 kb on - strand, within CA264_03975 at 921.088 kb on + strand, within CA264_03975 at 921.106 kb on - strand, within CA264_03975 at 921.106 kb on - strand, within CA264_03975 at 921.106 kb on - strand, within CA264_03975 at 921.139 kb on - strand, within CA264_03975 at 921.180 kb on + strand, within CA264_03975 at 921.358 kb on - strand, within CA264_03975 at 921.472 kb on + strand, within CA264_03975 at 921.489 kb on + strand, within CA264_03975 at 921.578 kb on + strand, within CA264_03975 at 921.578 kb on + strand, within CA264_03975 at 921.578 kb on + strand, within CA264_03975 at 921.582 kb on + strand, within CA264_03975 at 921.582 kb on + strand, within CA264_03975 at 921.582 kb on + strand, within CA264_03975 at 921.582 kb on + strand, within CA264_03975 at 921.583 kb on - strand, within CA264_03975 at 921.601 kb on + strand, within CA264_03975 at 921.601 kb on + strand, within CA264_03975 at 921.601 kb on + strand, within CA264_03975 at 921.601 kb on + strand, within CA264_03975 at 921.602 kb on - strand, within CA264_03975 at 921.602 kb on - strand, within CA264_03975 at 921.602 kb on - strand, within CA264_03975 at 921.602 kb on - strand, within CA264_03975 at 921.602 kb on - strand, within CA264_03975 at 921.602 kb on - strand, within CA264_03975 at 921.787 kb on - strand at 921.787 kb on - strand at 921.846 kb on + strand at 921.846 kb on + strand at 921.846 kb on + strand at 921.846 kb on + strand at 921.846 kb on + strand at 921.846 kb on + strand at 921.847 kb on - strand at 921.850 kb on + strand at 921.850 kb on + strand at 921.850 kb on + strand at 921.850 kb on + strand at 921.850 kb on + strand at 921.850 kb on + strand at 921.851 kb on - strand at 921.851 kb on - strand at 921.851 kb on - strand at 921.851 kb on - strand at 921.851 kb on - strand at 921.851 kb on - strand at 921.851 kb on - strand at 921.851 kb on - strand at 921.851 kb on - strand at 921.851 kb on - strand at 921.913 kb on + strand at 921.914 kb on - strand at 921.965 kb on - strand at 921.971 kb on - strand at 921.975 kb on - strand at 922.010 kb on + strand at 922.010 kb on + strand at 922.010 kb on + strand at 922.011 kb on - strand at 922.011 kb on - strand at 922.206 kb on + strand, within CA264_03980 at 922.320 kb on - strand, within CA264_03980 at 922.322 kb on + strand, within CA264_03980 at 922.322 kb on + strand, within CA264_03980 at 922.323 kb on - strand, within CA264_03980 at 922.352 kb on + strand, within CA264_03980 at 922.365 kb on + strand, within CA264_03980 at 922.370 kb on + strand, within CA264_03980 at 922.371 kb on - strand, within CA264_03980 at 922.371 kb on - strand, within CA264_03980 at 922.379 kb on + strand, within CA264_03980 at 922.380 kb on - strand, within CA264_03980 at 922.380 kb on - strand, within CA264_03980 at 922.402 kb on - strand, within CA264_03980 at 922.406 kb on - strand, within CA264_03980 at 922.453 kb on + strand, within CA264_03980 at 922.453 kb on + strand, within CA264_03980 at 922.463 kb on - strand, within CA264_03980 at 922.763 kb on + strand, within CA264_03980
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 919,746 + -1.8 919,756 - +0.1 919,769 + +1.4 919,769 + -0.9 919,769 + -0.8 919,788 - -0.1 919,789 + +1.0 919,790 - -0.1 920,052 + CA264_03970 0.17 +0.2 920,053 - CA264_03970 0.18 -1.4 920,053 - CA264_03970 0.18 -0.5 920,059 - CA264_03970 0.19 -0.4 920,255 + CA264_03970 0.50 -0.5 920,255 + CA264_03970 0.50 +0.2 920,256 - CA264_03970 0.50 -0.4 920,256 - CA264_03970 0.50 -1.0 920,259 + CA264_03970 0.51 -0.7 920,261 + CA264_03970 0.51 -0.5 920,455 - CA264_03970 0.82 -1.9 920,463 - CA264_03970 0.84 -0.4 920,471 - CA264_03970 0.85 +0.4 920,514 - +1.2 920,514 - -2.2 920,563 - +0.6 920,598 + +0.2 920,598 + +1.6 920,602 + +1.0 920,602 + -1.1 920,603 - +0.4 920,603 - +2.4 920,657 - -0.4 920,759 - +0.2 920,855 + CA264_03975 0.11 -0.9 920,881 + CA264_03975 0.14 -1.0 921,083 - CA264_03975 0.34 -0.6 921,088 + CA264_03975 0.34 +0.2 921,106 - CA264_03975 0.36 +0.0 921,106 - CA264_03975 0.36 -0.3 921,106 - CA264_03975 0.36 +1.2 921,139 - CA264_03975 0.39 +0.9 921,180 + CA264_03975 0.43 +0.1 921,358 - CA264_03975 0.60 -0.6 921,472 + CA264_03975 0.71 +1.9 921,489 + CA264_03975 0.73 -0.1 921,578 + CA264_03975 0.82 -0.2 921,578 + CA264_03975 0.82 -1.1 921,578 + CA264_03975 0.82 -1.2 921,582 + CA264_03975 0.82 +0.5 921,582 + CA264_03975 0.82 +1.0 921,582 + CA264_03975 0.82 +0.3 921,582 + CA264_03975 0.82 -0.5 921,583 - CA264_03975 0.82 -0.4 921,601 + CA264_03975 0.84 -0.4 921,601 + CA264_03975 0.84 -0.9 921,601 + CA264_03975 0.84 -0.0 921,601 + CA264_03975 0.84 -1.6 921,602 - CA264_03975 0.84 -0.6 921,602 - CA264_03975 0.84 +0.4 921,602 - CA264_03975 0.84 +0.4 921,602 - CA264_03975 0.84 +1.4 921,602 - CA264_03975 0.84 -1.9 921,602 - CA264_03975 0.84 -1.0 921,787 - +0.5 921,787 - +1.4 921,846 + +0.1 921,846 + +1.4 921,846 + +0.6 921,846 + +0.1 921,846 + +1.0 921,846 + +1.4 921,847 - -1.4 921,850 + -1.7 921,850 + +0.5 921,850 + -1.3 921,850 + -0.8 921,850 + -0.4 921,850 + -0.2 921,851 - -0.4 921,851 - +1.9 921,851 - +2.4 921,851 - +0.7 921,851 - -2.2 921,851 - -0.8 921,851 - +0.1 921,851 - +1.8 921,851 - -2.2 921,851 - -1.0 921,913 + +0.0 921,914 - -0.6 921,965 - -0.5 921,971 - -1.8 921,975 - +0.6 922,010 + -0.5 922,010 + -1.8 922,010 + -1.1 922,011 - +1.2 922,011 - +1.1 922,206 + CA264_03980 0.15 -1.6 922,320 - CA264_03980 0.19 -0.7 922,322 + CA264_03980 0.19 +0.5 922,322 + CA264_03980 0.19 -0.1 922,323 - CA264_03980 0.19 +1.0 922,352 + CA264_03980 0.21 -0.3 922,365 + CA264_03980 0.21 -1.7 922,370 + CA264_03980 0.21 +4.7 922,371 - CA264_03980 0.21 -0.1 922,371 - CA264_03980 0.21 -1.8 922,379 + CA264_03980 0.22 +1.3 922,380 - CA264_03980 0.22 +1.1 922,380 - CA264_03980 0.22 +1.6 922,402 - CA264_03980 0.22 +1.0 922,406 - CA264_03980 0.23 -1.7 922,453 + CA264_03980 0.24 -1.1 922,453 + CA264_03980 0.24 -1.5 922,463 - CA264_03980 0.25 -1.0 922,763 + CA264_03980 0.36 -0.5
Or see this region's nucleotide sequence