Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03280 and CA264_03285 are separated by 121 nucleotides CA264_03285 and CA264_03290 are separated by 81 nucleotides CA264_03290 and CA264_03295 overlap by 8 nucleotides
CA264_03280: CA264_03280 - hypothetical protein, at 771,457 to 771,789
_03280
CA264_03285: CA264_03285 - hypothetical protein, at 771,911 to 772,096
_03285
CA264_03290: CA264_03290 - hypothetical protein, at 772,178 to 773,185
_03290
CA264_03295: CA264_03295 - hypothetical protein, at 773,178 to 773,873
_03295
Position (kb)
772
773
774 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 771.180 kb on - strand at 771.180 kb on - strand at 771.331 kb on - strand at 771.344 kb on + strand at 771.344 kb on + strand at 771.345 kb on - strand at 771.346 kb on + strand at 771.346 kb on + strand at 771.347 kb on - strand at 771.350 kb on + strand at 771.352 kb on + strand at 771.352 kb on + strand at 771.352 kb on + strand at 771.353 kb on - strand at 771.356 kb on + strand at 771.356 kb on + strand at 771.357 kb on - strand at 771.358 kb on + strand at 771.362 kb on + strand at 771.363 kb on - strand at 771.365 kb on - strand at 771.386 kb on + strand at 771.421 kb on + strand at 771.422 kb on - strand at 771.444 kb on - strand at 771.451 kb on + strand at 771.525 kb on - strand, within CA264_03280 at 771.555 kb on + strand, within CA264_03280 at 771.558 kb on - strand, within CA264_03280 at 771.587 kb on - strand, within CA264_03280 at 771.597 kb on - strand, within CA264_03280 at 771.636 kb on - strand, within CA264_03280 at 771.636 kb on - strand, within CA264_03280 at 771.639 kb on - strand, within CA264_03280 at 771.639 kb on - strand, within CA264_03280 at 771.681 kb on - strand, within CA264_03280 at 771.693 kb on - strand, within CA264_03280 at 771.693 kb on - strand, within CA264_03280 at 771.693 kb on - strand, within CA264_03280 at 771.706 kb on + strand, within CA264_03280 at 771.707 kb on - strand, within CA264_03280 at 771.707 kb on - strand, within CA264_03280 at 771.707 kb on - strand, within CA264_03280 at 771.749 kb on + strand, within CA264_03280 at 771.750 kb on - strand, within CA264_03280 at 771.750 kb on - strand, within CA264_03280 at 771.750 kb on - strand at 771.781 kb on + strand at 771.905 kb on + strand at 771.912 kb on + strand at 771.912 kb on + strand at 771.913 kb on - strand at 771.913 kb on - strand at 771.913 kb on - strand at 771.939 kb on + strand, within CA264_03285 at 772.065 kb on + strand, within CA264_03285 at 772.066 kb on - strand, within CA264_03285 at 772.132 kb on - strand at 772.133 kb on + strand at 772.134 kb on - strand at 772.137 kb on + strand at 772.137 kb on + strand at 772.138 kb on - strand at 772.144 kb on + strand at 772.250 kb on - strand at 772.297 kb on - strand, within CA264_03290 at 772.421 kb on - strand, within CA264_03290 at 772.421 kb on - strand, within CA264_03290 at 772.431 kb on + strand, within CA264_03290 at 772.538 kb on + strand, within CA264_03290 at 772.539 kb on - strand, within CA264_03290 at 772.553 kb on - strand, within CA264_03290 at 772.601 kb on + strand, within CA264_03290 at 772.602 kb on - strand, within CA264_03290 at 772.602 kb on - strand, within CA264_03290 at 772.602 kb on - strand, within CA264_03290 at 772.603 kb on + strand, within CA264_03290 at 772.665 kb on + strand, within CA264_03290 at 772.666 kb on - strand, within CA264_03290 at 772.848 kb on + strand, within CA264_03290 at 772.849 kb on - strand, within CA264_03290 at 772.857 kb on + strand, within CA264_03290 at 772.858 kb on - strand, within CA264_03290 at 772.896 kb on + strand, within CA264_03290 at 772.926 kb on + strand, within CA264_03290 at 772.932 kb on + strand, within CA264_03290 at 772.932 kb on + strand, within CA264_03290 at 773.082 kb on + strand, within CA264_03290 at 773.116 kb on + strand at 773.166 kb on - strand at 773.169 kb on + strand at 773.169 kb on + strand at 773.169 kb on + strand at 773.169 kb on + strand at 773.169 kb on + strand at 773.169 kb on + strand at 773.170 kb on - strand at 773.170 kb on - strand at 773.171 kb on + strand at 773.171 kb on + strand at 773.171 kb on + strand at 773.171 kb on + strand at 773.171 kb on + strand at 773.171 kb on + strand at 773.171 kb on + strand at 773.172 kb on - strand at 773.172 kb on - strand at 773.180 kb on - strand at 773.190 kb on - strand at 773.199 kb on + strand at 773.199 kb on + strand at 773.199 kb on + strand at 773.200 kb on - strand at 773.203 kb on + strand at 773.203 kb on + strand at 773.257 kb on + strand, within CA264_03295 at 773.258 kb on - strand, within CA264_03295 at 773.358 kb on + strand, within CA264_03295 at 773.363 kb on - strand, within CA264_03295 at 773.393 kb on - strand, within CA264_03295 at 773.439 kb on + strand, within CA264_03295 at 773.664 kb on + strand, within CA264_03295 at 773.665 kb on - strand, within CA264_03295 at 773.952 kb on + strand at 773.952 kb on + strand at 773.953 kb on - strand at 773.962 kb on + strand at 773.962 kb on + strand at 773.963 kb on - strand at 773.965 kb on + strand at 773.965 kb on + strand at 773.965 kb on + strand at 773.966 kb on - strand at 773.968 kb on - strand at 773.968 kb on - strand at 773.971 kb on - strand at 774.108 kb on - strand at 774.113 kb on - strand at 774.185 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 771,180 - -0.6 771,180 - -1.7 771,331 - +0.6 771,344 + -0.8 771,344 + +1.9 771,345 - -1.1 771,346 + -0.5 771,346 + +0.3 771,347 - +1.0 771,350 + +0.3 771,352 + +1.2 771,352 + -1.9 771,352 + +0.8 771,353 - +0.4 771,356 + +0.6 771,356 + -1.2 771,357 - -3.0 771,358 + +0.4 771,362 + -0.6 771,363 - -2.2 771,365 - -0.7 771,386 + -0.2 771,421 + -2.3 771,422 - -1.6 771,444 - -1.0 771,451 + -1.1 771,525 - CA264_03280 0.20 +0.1 771,555 + CA264_03280 0.29 +0.1 771,558 - CA264_03280 0.30 +1.2 771,587 - CA264_03280 0.39 +1.9 771,597 - CA264_03280 0.42 -2.6 771,636 - CA264_03280 0.54 +0.2 771,636 - CA264_03280 0.54 +0.6 771,639 - CA264_03280 0.55 -1.7 771,639 - CA264_03280 0.55 -1.4 771,681 - CA264_03280 0.67 -0.4 771,693 - CA264_03280 0.71 -1.1 771,693 - CA264_03280 0.71 +0.3 771,693 - CA264_03280 0.71 +1.3 771,706 + CA264_03280 0.75 -0.7 771,707 - CA264_03280 0.75 -0.3 771,707 - CA264_03280 0.75 -1.2 771,707 - CA264_03280 0.75 -0.8 771,749 + CA264_03280 0.88 -0.8 771,750 - CA264_03280 0.88 +1.3 771,750 - CA264_03280 0.88 -2.0 771,750 - +3.9 771,781 + -1.4 771,905 + -1.7 771,912 + -0.4 771,912 + +0.7 771,913 - -0.3 771,913 - +1.6 771,913 - +1.1 771,939 + CA264_03285 0.15 -1.5 772,065 + CA264_03285 0.83 -0.2 772,066 - CA264_03285 0.83 -2.0 772,132 - -0.2 772,133 + -0.5 772,134 - -0.1 772,137 + -2.6 772,137 + +0.7 772,138 - +0.3 772,144 + -0.8 772,250 - -0.1 772,297 - CA264_03290 0.12 -1.5 772,421 - CA264_03290 0.24 -0.3 772,421 - CA264_03290 0.24 -1.5 772,431 + CA264_03290 0.25 -1.0 772,538 + CA264_03290 0.36 -2.1 772,539 - CA264_03290 0.36 +0.3 772,553 - CA264_03290 0.37 +0.4 772,601 + CA264_03290 0.42 +0.1 772,602 - CA264_03290 0.42 +0.4 772,602 - CA264_03290 0.42 -2.2 772,602 - CA264_03290 0.42 +0.2 772,603 + CA264_03290 0.42 -1.9 772,665 + CA264_03290 0.48 -1.7 772,666 - CA264_03290 0.48 -1.1 772,848 + CA264_03290 0.66 +0.3 772,849 - CA264_03290 0.67 +0.2 772,857 + CA264_03290 0.67 +0.4 772,858 - CA264_03290 0.67 +0.1 772,896 + CA264_03290 0.71 -1.4 772,926 + CA264_03290 0.74 +0.3 772,932 + CA264_03290 0.75 +1.2 772,932 + CA264_03290 0.75 -0.0 773,082 + CA264_03290 0.90 -0.0 773,116 + +1.1 773,166 - -0.8 773,169 + -1.1 773,169 + +0.4 773,169 + -1.3 773,169 + -0.1 773,169 + -1.0 773,169 + -1.1 773,170 - -0.3 773,170 - -2.2 773,171 + +0.3 773,171 + +0.5 773,171 + -2.0 773,171 + -0.4 773,171 + -0.1 773,171 + -0.9 773,171 + -0.2 773,172 - -0.8 773,172 - -0.3 773,180 - +0.4 773,190 - -1.1 773,199 + +0.4 773,199 + +0.4 773,199 + +1.3 773,200 - +0.2 773,203 + -0.4 773,203 + -0.2 773,257 + CA264_03295 0.11 -1.4 773,258 - CA264_03295 0.11 -0.2 773,358 + CA264_03295 0.26 -0.2 773,363 - CA264_03295 0.27 -1.5 773,393 - CA264_03295 0.31 +1.6 773,439 + CA264_03295 0.38 -0.7 773,664 + CA264_03295 0.70 +0.4 773,665 - CA264_03295 0.70 -1.6 773,952 + -0.8 773,952 + +1.5 773,953 - -1.4 773,962 + -0.2 773,962 + +0.7 773,963 - -2.0 773,965 + -0.3 773,965 + -0.3 773,965 + -0.8 773,966 - -0.5 773,968 - -0.4 773,968 - +0.4 773,971 - -1.7 774,108 - -1.2 774,113 - -0.4 774,185 - -0.6
Or see this region's nucleotide sequence