Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02905 and CA264_02910 are separated by 103 nucleotides CA264_02910 and CA264_02915 are separated by 132 nucleotides CA264_02915 and CA264_02920 are separated by 298 nucleotides
CA264_02905: CA264_02905 - hypothetical protein, at 662,025 to 662,831
_02905
CA264_02910: CA264_02910 - hypothetical protein, at 662,935 to 663,306
_02910
CA264_02915: CA264_02915 - hypothetical protein, at 663,439 to 663,819
_02915
CA264_02920: CA264_02920 - response regulator, at 664,118 to 664,525
_02920
Position (kb) 662
663
664 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 661.943 kb on - strand at 661.944 kb on + strand at 661.975 kb on + strand at 662.002 kb on + strand at 662.002 kb on + strand at 662.002 kb on + strand at 662.003 kb on - strand at 662.019 kb on - strand at 662.085 kb on + strand at 662.085 kb on + strand at 662.086 kb on - strand at 662.086 kb on - strand at 662.086 kb on - strand at 662.087 kb on + strand at 662.087 kb on + strand at 662.087 kb on + strand at 662.087 kb on + strand at 662.088 kb on - strand at 662.088 kb on - strand at 662.093 kb on + strand at 662.094 kb on - strand at 662.196 kb on + strand, within CA264_02905 at 662.197 kb on - strand, within CA264_02905 at 662.197 kb on - strand, within CA264_02905 at 662.197 kb on - strand, within CA264_02905 at 662.236 kb on + strand, within CA264_02905 at 662.241 kb on + strand, within CA264_02905 at 662.242 kb on - strand, within CA264_02905 at 662.355 kb on + strand, within CA264_02905 at 662.356 kb on - strand, within CA264_02905 at 662.356 kb on - strand, within CA264_02905 at 662.357 kb on + strand, within CA264_02905 at 662.357 kb on + strand, within CA264_02905 at 662.444 kb on + strand, within CA264_02905 at 662.648 kb on + strand, within CA264_02905 at 662.694 kb on - strand, within CA264_02905 at 662.701 kb on - strand, within CA264_02905 at 662.701 kb on - strand, within CA264_02905 at 662.701 kb on - strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.732 kb on + strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.733 kb on - strand, within CA264_02905 at 662.735 kb on - strand, within CA264_02905 at 662.742 kb on + strand, within CA264_02905 at 662.743 kb on - strand, within CA264_02905 at 662.743 kb on - strand, within CA264_02905 at 662.796 kb on + strand at 662.796 kb on + strand at 662.797 kb on - strand at 662.797 kb on - strand at 662.803 kb on - strand at 662.823 kb on - strand at 662.865 kb on - strand at 662.902 kb on + strand at 662.903 kb on - strand at 662.918 kb on + strand at 662.919 kb on - strand at 662.919 kb on - strand at 662.952 kb on + strand at 662.991 kb on + strand, within CA264_02910 at 662.998 kb on + strand, within CA264_02910 at 662.999 kb on - strand, within CA264_02910 at 663.137 kb on - strand, within CA264_02910 at 663.154 kb on - strand, within CA264_02910 at 663.207 kb on + strand, within CA264_02910 at 663.325 kb on - strand at 663.325 kb on - strand at 663.344 kb on + strand at 663.345 kb on - strand at 663.349 kb on - strand at 663.370 kb on + strand at 663.377 kb on + strand at 663.378 kb on - strand at 663.427 kb on + strand at 663.444 kb on - strand at 663.492 kb on - strand, within CA264_02915 at 663.500 kb on + strand, within CA264_02915 at 663.548 kb on + strand, within CA264_02915 at 663.548 kb on + strand, within CA264_02915 at 663.548 kb on + strand, within CA264_02915 at 663.602 kb on + strand, within CA264_02915 at 663.603 kb on - strand, within CA264_02915 at 663.660 kb on + strand, within CA264_02915 at 663.665 kb on + strand, within CA264_02915 at 663.798 kb on + strand at 663.798 kb on + strand at 663.798 kb on + strand at 663.825 kb on + strand at 663.825 kb on + strand at 663.826 kb on - strand at 663.828 kb on - strand at 663.828 kb on - strand at 663.828 kb on - strand at 663.828 kb on - strand at 663.832 kb on + strand at 663.833 kb on - strand at 663.869 kb on + strand at 663.870 kb on - strand at 663.874 kb on - strand at 663.874 kb on - strand at 663.880 kb on - strand at 663.880 kb on - strand at 663.880 kb on - strand at 663.880 kb on - strand at 664.087 kb on + strand at 664.088 kb on - strand at 664.128 kb on + strand at 664.129 kb on - strand at 664.187 kb on + strand, within CA264_02920 at 664.188 kb on - strand, within CA264_02920 at 664.225 kb on + strand, within CA264_02920 at 664.246 kb on + strand, within CA264_02920 at 664.247 kb on - strand, within CA264_02920 at 664.280 kb on + strand, within CA264_02920 at 664.291 kb on - strand, within CA264_02920
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 661,943 - -0.7 661,944 + -0.9 661,975 + -1.3 662,002 + -2.7 662,002 + +0.4 662,002 + -0.2 662,003 - +1.0 662,019 - +1.2 662,085 + -0.1 662,085 + +1.3 662,086 - +0.3 662,086 - -0.6 662,086 - -2.2 662,087 + +2.1 662,087 + -1.7 662,087 + -0.9 662,087 + -0.8 662,088 - +1.2 662,088 - -0.7 662,093 + -1.4 662,094 - +1.0 662,196 + CA264_02905 0.21 +1.0 662,197 - CA264_02905 0.21 -2.4 662,197 - CA264_02905 0.21 -0.2 662,197 - CA264_02905 0.21 -1.2 662,236 + CA264_02905 0.26 -0.4 662,241 + CA264_02905 0.27 -0.2 662,242 - CA264_02905 0.27 +0.2 662,355 + CA264_02905 0.41 +2.0 662,356 - CA264_02905 0.41 -2.2 662,356 - CA264_02905 0.41 +0.2 662,357 + CA264_02905 0.41 -1.3 662,357 + CA264_02905 0.41 +0.8 662,444 + CA264_02905 0.52 -1.1 662,648 + CA264_02905 0.77 +0.8 662,694 - CA264_02905 0.83 -1.1 662,701 - CA264_02905 0.84 -0.1 662,701 - CA264_02905 0.84 -1.0 662,701 - CA264_02905 0.84 +1.5 662,732 + CA264_02905 0.88 -0.9 662,732 + CA264_02905 0.88 -0.2 662,732 + CA264_02905 0.88 -0.7 662,732 + CA264_02905 0.88 -1.5 662,733 - CA264_02905 0.88 +1.8 662,733 - CA264_02905 0.88 +0.5 662,733 - CA264_02905 0.88 +1.4 662,733 - CA264_02905 0.88 +0.3 662,735 - CA264_02905 0.88 +0.7 662,742 + CA264_02905 0.89 -0.7 662,743 - CA264_02905 0.89 -2.5 662,743 - CA264_02905 0.89 +0.1 662,796 + -2.2 662,796 + +1.2 662,797 - +0.1 662,797 - -2.1 662,803 - -0.7 662,823 - -2.8 662,865 - -0.1 662,902 + -0.0 662,903 - -1.3 662,918 + -0.8 662,919 - -2.4 662,919 - -1.4 662,952 + -0.3 662,991 + CA264_02910 0.15 +0.5 662,998 + CA264_02910 0.17 +0.2 662,999 - CA264_02910 0.17 -0.6 663,137 - CA264_02910 0.54 +0.4 663,154 - CA264_02910 0.59 +1.7 663,207 + CA264_02910 0.73 -1.8 663,325 - -0.4 663,325 - -0.5 663,344 + -0.2 663,345 - -0.2 663,349 - -1.8 663,370 + +0.5 663,377 + -2.9 663,378 - +0.7 663,427 + -0.2 663,444 - -2.1 663,492 - CA264_02915 0.14 -0.6 663,500 + CA264_02915 0.16 +0.5 663,548 + CA264_02915 0.29 +0.0 663,548 + CA264_02915 0.29 -1.7 663,548 + CA264_02915 0.29 +0.8 663,602 + CA264_02915 0.43 -0.8 663,603 - CA264_02915 0.43 -0.7 663,660 + CA264_02915 0.58 -1.1 663,665 + CA264_02915 0.59 +0.7 663,798 + -0.4 663,798 + -0.5 663,798 + +0.5 663,825 + +0.0 663,825 + -0.7 663,826 - -0.3 663,828 - -0.3 663,828 - -0.5 663,828 - +0.1 663,828 - -1.3 663,832 + +1.2 663,833 - -0.2 663,869 + +2.2 663,870 - -0.6 663,874 - -0.7 663,874 - -1.6 663,880 - -0.3 663,880 - -0.8 663,880 - -0.1 663,880 - +0.4 664,087 + -2.2 664,088 - -1.4 664,128 + -0.7 664,129 - -0.5 664,187 + CA264_02920 0.17 -0.6 664,188 - CA264_02920 0.17 +0.1 664,225 + CA264_02920 0.26 -0.9 664,246 + CA264_02920 0.31 -1.3 664,247 - CA264_02920 0.32 +0.2 664,280 + CA264_02920 0.40 +1.2 664,291 - CA264_02920 0.42 +1.2
Or see this region's nucleotide sequence