Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02495 and CA264_02500 are separated by 647 nucleotides CA264_02500 and CA264_02505 are separated by 50 nucleotides CA264_02505 and CA264_02510 are separated by 880 nucleotides
CA264_02495: CA264_02495 - hypothetical protein, at 579,925 to 580,821
_02495
CA264_02500: CA264_02500 - hypothetical protein, at 581,469 to 581,738
_02500
CA264_02505: CA264_02505 - hypothetical protein, at 581,789 to 582,454
_02505
CA264_02510: CA264_02510 - TonB-dependent receptor, at 583,335 to 585,830
_02510
Position (kb)
581
582
583 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 580.803 kb on - strand at 580.803 kb on - strand at 580.803 kb on - strand at 580.803 kb on - strand at 580.818 kb on - strand at 580.927 kb on + strand at 580.942 kb on + strand at 580.942 kb on + strand at 580.942 kb on + strand at 580.942 kb on + strand at 580.943 kb on - strand at 580.943 kb on - strand at 580.943 kb on - strand at 580.943 kb on - strand at 580.943 kb on - strand at 580.943 kb on - strand at 580.945 kb on - strand at 580.945 kb on - strand at 580.946 kb on + strand at 580.947 kb on - strand at 580.959 kb on - strand at 580.961 kb on + strand at 580.964 kb on + strand at 580.965 kb on - strand at 581.081 kb on - strand at 581.081 kb on - strand at 581.093 kb on + strand at 581.100 kb on - strand at 581.100 kb on - strand at 581.101 kb on + strand at 581.102 kb on - strand at 581.104 kb on + strand at 581.178 kb on - strand at 581.178 kb on - strand at 581.191 kb on + strand at 581.191 kb on + strand at 581.191 kb on + strand at 581.197 kb on + strand at 581.198 kb on - strand at 581.201 kb on - strand at 581.250 kb on - strand at 581.258 kb on - strand at 581.281 kb on - strand at 581.283 kb on - strand at 581.283 kb on - strand at 581.290 kb on + strand at 581.308 kb on + strand at 581.308 kb on + strand at 581.309 kb on - strand at 581.309 kb on - strand at 581.317 kb on + strand at 581.319 kb on + strand at 581.325 kb on + strand at 581.326 kb on - strand at 581.326 kb on - strand at 581.334 kb on - strand at 581.444 kb on + strand at 581.444 kb on + strand at 581.444 kb on + strand at 581.444 kb on + strand at 581.606 kb on - strand, within CA264_02500 at 581.657 kb on + strand, within CA264_02500 at 581.657 kb on + strand, within CA264_02500 at 581.657 kb on + strand, within CA264_02500 at 581.682 kb on + strand, within CA264_02500 at 581.683 kb on - strand, within CA264_02500 at 581.722 kb on - strand at 581.732 kb on - strand at 581.790 kb on + strand at 581.889 kb on + strand, within CA264_02505 at 581.899 kb on + strand, within CA264_02505 at 581.905 kb on + strand, within CA264_02505 at 581.963 kb on - strand, within CA264_02505 at 581.963 kb on - strand, within CA264_02505 at 582.005 kb on - strand, within CA264_02505 at 582.051 kb on + strand, within CA264_02505 at 582.052 kb on - strand, within CA264_02505 at 582.162 kb on - strand, within CA264_02505 at 582.162 kb on - strand, within CA264_02505 at 582.162 kb on - strand, within CA264_02505 at 582.162 kb on - strand, within CA264_02505 at 582.186 kb on - strand, within CA264_02505 at 582.207 kb on + strand, within CA264_02505 at 582.332 kb on + strand, within CA264_02505 at 582.336 kb on + strand, within CA264_02505 at 582.337 kb on - strand, within CA264_02505 at 582.378 kb on - strand, within CA264_02505 at 582.454 kb on + strand at 582.482 kb on - strand at 582.485 kb on + strand at 582.485 kb on + strand at 582.485 kb on + strand at 582.486 kb on - strand at 582.507 kb on - strand at 582.517 kb on - strand at 582.517 kb on - strand at 582.531 kb on + strand at 582.532 kb on - strand at 582.532 kb on - strand at 582.534 kb on + strand at 582.534 kb on + strand at 582.535 kb on - strand at 582.556 kb on - strand at 582.565 kb on - strand at 582.615 kb on + strand at 582.658 kb on - strand at 582.658 kb on - strand at 582.768 kb on - strand at 582.798 kb on + strand at 582.801 kb on - strand at 582.838 kb on + strand at 582.847 kb on - strand at 582.916 kb on - strand at 582.970 kb on - strand at 583.141 kb on - strand at 583.141 kb on - strand at 583.160 kb on + strand at 583.160 kb on + strand at 583.161 kb on - strand at 583.162 kb on + strand at 583.163 kb on - strand at 583.163 kb on - strand at 583.166 kb on + strand at 583.261 kb on - strand at 583.308 kb on + strand at 583.312 kb on + strand at 583.312 kb on + strand at 583.318 kb on + strand at 583.319 kb on - strand at 583.322 kb on + strand at 583.322 kb on + strand at 583.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 580,803 - -0.7 580,803 - -1.0 580,803 - +0.7 580,803 - -0.1 580,818 - +0.7 580,927 + -1.4 580,942 + -0.6 580,942 + -1.4 580,942 + -0.5 580,942 + +3.0 580,943 - +0.5 580,943 - -1.7 580,943 - -0.6 580,943 - -1.2 580,943 - -0.5 580,943 - -1.3 580,945 - +0.4 580,945 - +0.7 580,946 + -1.7 580,947 - +0.1 580,959 - +0.3 580,961 + +0.7 580,964 + -1.5 580,965 - +1.5 581,081 - -0.7 581,081 - -0.7 581,093 + -0.6 581,100 - -0.3 581,100 - -1.1 581,101 + +0.7 581,102 - -1.5 581,104 + -0.4 581,178 - -0.4 581,178 - +0.8 581,191 + -0.7 581,191 + +1.1 581,191 + +0.9 581,197 + +3.6 581,198 - -1.7 581,201 - -0.1 581,250 - -0.2 581,258 - +1.4 581,281 - +0.6 581,283 - -0.3 581,283 - +0.3 581,290 + +0.5 581,308 + -0.8 581,308 + +1.0 581,309 - -0.7 581,309 - +2.9 581,317 + -0.9 581,319 + -0.1 581,325 + -1.2 581,326 - +1.0 581,326 - -2.9 581,334 - +1.0 581,444 + -0.7 581,444 + -0.7 581,444 + -0.5 581,444 + -0.6 581,606 - CA264_02500 0.51 +0.3 581,657 + CA264_02500 0.70 +0.3 581,657 + CA264_02500 0.70 -0.6 581,657 + CA264_02500 0.70 -1.0 581,682 + CA264_02500 0.79 +0.2 581,683 - CA264_02500 0.79 +1.7 581,722 - -1.3 581,732 - +0.0 581,790 + -1.4 581,889 + CA264_02505 0.15 +0.0 581,899 + CA264_02505 0.17 +0.7 581,905 + CA264_02505 0.17 +0.0 581,963 - CA264_02505 0.26 +1.1 581,963 - CA264_02505 0.26 -0.9 582,005 - CA264_02505 0.32 +2.6 582,051 + CA264_02505 0.39 -0.3 582,052 - CA264_02505 0.39 +1.3 582,162 - CA264_02505 0.56 -1.1 582,162 - CA264_02505 0.56 -1.1 582,162 - CA264_02505 0.56 -0.9 582,162 - CA264_02505 0.56 +2.0 582,186 - CA264_02505 0.60 -0.2 582,207 + CA264_02505 0.63 -0.3 582,332 + CA264_02505 0.82 -1.4 582,336 + CA264_02505 0.82 -0.1 582,337 - CA264_02505 0.82 +1.0 582,378 - CA264_02505 0.88 -1.1 582,454 + -1.0 582,482 - +1.0 582,485 + -0.7 582,485 + -0.4 582,485 + +0.9 582,486 - +0.7 582,507 - -0.7 582,517 - -1.2 582,517 - +0.6 582,531 + +0.3 582,532 - -0.6 582,532 - +0.4 582,534 + -0.6 582,534 + -1.0 582,535 - +1.4 582,556 - +1.6 582,565 - +2.5 582,615 + -0.8 582,658 - -0.2 582,658 - -1.0 582,768 - -1.4 582,798 + +0.6 582,801 - -0.6 582,838 + -0.7 582,847 - -2.2 582,916 - -1.2 582,970 - -1.7 583,141 - -0.8 583,141 - -0.2 583,160 + -0.2 583,160 + -0.5 583,161 - -0.8 583,162 + -0.4 583,163 - -1.3 583,163 - -1.0 583,166 + +1.6 583,261 - -1.1 583,308 + -1.2 583,312 + -2.4 583,312 + +0.4 583,318 + -0.4 583,319 - +0.3 583,322 + -1.0 583,322 + +1.1 583,323 - -1.1
Or see this region's nucleotide sequence