Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3540

Experiment: D-Salicin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Salicin (C)
4,193,778	+		Echvi_3539	0.54	-0.4
4,193,828	+		Echvi_3539	0.60	-0.8
4,193,829	-		Echvi_3539	0.60	+0.2
4,193,894	-		Echvi_3539	0.67	+0.1
4,193,943	+		Echvi_3539	0.73	-0.2
4,193,943	+		Echvi_3539	0.73	+0.3
4,193,946	-		Echvi_3539	0.73	+0.3
4,193,946	-		Echvi_3539	0.73	-1.4
4,193,948	+		Echvi_3539	0.73	+1.5
4,193,978	-		Echvi_3539	0.77	-1.1
4,194,051	+		Echvi_3539	0.85	+1.4
4,194,058	+		Echvi_3539	0.86	-1.8
4,194,089	+		Echvi_3539	0.89	+0.9
4,194,089	+		Echvi_3539	0.89	-0.8
4,194,104	+				-0.2
4,194,105	-				-1.6
4,194,110	+				+1.9
4,194,165	+				+0.8
4,194,184	-				+1.3
4,194,224	-				+1.2
4,194,287	+				+0.1
4,194,287	+				-0.6
4,194,288	-				-0.6
4,194,290	+				-1.2
4,194,291	-				-1.1
4,194,479	+				+0.4
4,194,601	-				-0.7
4,194,635	+				-1.1
4,194,635	+				-0.2
4,194,636	-				-2.0
4,194,636	-				-3.3
4,194,744	+				-0.7
4,194,765	+				+0.0
4,194,801	-				+0.4
4,194,878	+				-0.7
4,194,879	-				-0.1
4,194,879	-				-0.1
4,194,918	+				-0.4
4,194,918	+				-0.5
4,194,939	-				+1.8
4,194,984	-				+1.8
4,195,038	+				-1.8
4,195,038	+				-0.5
4,195,039	-				-0.7
4,195,039	-				-2.1
4,195,103	+		Echvi_3540	0.11	+0.3
4,195,103	+		Echvi_3540	0.11	+0.3
4,195,103	+		Echvi_3540	0.11	-1.1
4,195,103	+		Echvi_3540	0.11	+0.8
4,195,103	+		Echvi_3540	0.11	-0.6
4,195,103	+		Echvi_3540	0.11	-1.1
4,195,103	+		Echvi_3540	0.11	-0.8
4,195,103	+		Echvi_3540	0.11	+0.0
4,195,104	-		Echvi_3540	0.11	+0.8
4,195,104	-		Echvi_3540	0.11	+0.4
4,195,104	-		Echvi_3540	0.11	+0.6
4,195,104	-		Echvi_3540	0.11	-1.6
4,195,104	-		Echvi_3540	0.11	+0.5
4,195,104	-		Echvi_3540	0.11	-2.0
4,195,105	+		Echvi_3540	0.11	+0.7
4,195,105	+		Echvi_3540	0.11	-0.3
4,195,105	+		Echvi_3540	0.11	+0.0
4,195,106	-		Echvi_3540	0.11	+0.2
4,195,106	-		Echvi_3540	0.11	+1.3
4,195,106	-		Echvi_3540	0.11	+0.5
4,195,107	+		Echvi_3540	0.11	+0.1
4,195,107	+		Echvi_3540	0.11	-0.3
4,195,107	+		Echvi_3540	0.11	-0.3
4,195,128	+		Echvi_3540	0.12	-0.7
4,195,213	-		Echvi_3540	0.15	-1.2
4,195,363	-		Echvi_3540	0.20	+0.1
4,195,363	-		Echvi_3540	0.20	+0.5
4,195,371	+		Echvi_3540	0.20	+1.4
4,195,483	+		Echvi_3540	0.24	+1.9
4,195,489	-		Echvi_3540	0.24	+0.4
4,195,518	+		Echvi_3540	0.25	-0.4
4,195,561	+		Echvi_3540	0.26	+0.7
4,195,566	+		Echvi_3540	0.27	+0.1
4,195,566	+		Echvi_3540	0.27	+1.7
4,195,566	+		Echvi_3540	0.27	+1.7
4,195,567	-		Echvi_3540	0.27	-0.3
4,195,567	-				+2.4
4,195,570	+		Echvi_3540	0.27	+2.0
4,195,570	+		Echvi_3540	0.27	-0.7
4,195,570	+		Echvi_3540	0.27	-1.8
4,195,570	+		Echvi_3540	0.27	-1.6
4,195,571	-		Echvi_3540	0.27	-0.6
4,195,571	-		Echvi_3540	0.27	+0.0
4,195,571	-		Echvi_3540	0.27	+0.1
4,195,571	-		Echvi_3540	0.27	-1.6
4,195,596	+		Echvi_3540	0.28	-0.2
4,195,658	-		Echvi_3540	0.30	+1.3
4,195,666	+		Echvi_3540	0.30	+0.6
4,195,666	+		Echvi_3540	0.30	+1.2
4,195,667	-		Echvi_3540	0.30	+0.9
4,195,713	+		Echvi_3540	0.31	-0.6
4,195,753	-		Echvi_3540	0.33	+0.3
4,195,786	-		Echvi_3540	0.34	-0.1
4,195,786	-		Echvi_3540	0.34	+0.9
4,195,786	-		Echvi_3540	0.34	+0.5
4,195,799	+		Echvi_3540	0.34	+0.4
4,195,867	-		Echvi_3540	0.36	+0.5
4,195,871	+		Echvi_3540	0.37	-0.6
4,195,872	-		Echvi_3540	0.37	+0.9
4,195,872	-		Echvi_3540	0.37	-1.4
4,195,933	+		Echvi_3540	0.39	-1.6
4,195,934	-		Echvi_3540	0.39	+1.1
4,195,951	-		Echvi_3540	0.39	+0.1
4,196,014	+		Echvi_3540	0.41	-2.3
4,196,014	+		Echvi_3540	0.41	-0.1
4,196,014	+		Echvi_3540	0.41	+0.2
4,196,015	-		Echvi_3540	0.41	-0.5
4,196,042	+		Echvi_3540	0.42	+1.0
4,196,042	+		Echvi_3540	0.42	-0.3
4,196,044	+		Echvi_3540	0.42	+0.3
4,196,044	+		Echvi_3540	0.42	+1.3
4,196,044	+		Echvi_3540	0.42	-1.0
4,196,044	+		Echvi_3540	0.42	-0.0
4,196,045	-		Echvi_3540	0.42	+0.4
4,196,045	-		Echvi_3540	0.42	-0.6
4,196,045	-		Echvi_3540	0.42	-1.7
4,196,045	-		Echvi_3540	0.42	-0.6
4,196,102	-		Echvi_3540	0.44	+0.8
4,196,275	-		Echvi_3540	0.50	-0.8
4,196,278	+		Echvi_3540	0.50	-1.2
4,196,278	+		Echvi_3540	0.50	-0.1
4,196,278	+		Echvi_3540	0.50	+0.3
4,196,278	+		Echvi_3540	0.50	+0.5
4,196,279	-		Echvi_3540	0.50	+0.0
4,196,281	-		Echvi_3540	0.50	-0.4
4,196,302	+		Echvi_3540	0.51	-1.7
4,196,302	+		Echvi_3540	0.51	-1.6
4,196,303	-		Echvi_3540	0.51	-0.5
4,196,308	-		Echvi_3540	0.51	+0.6
4,196,324	-		Echvi_3540	0.52	-0.4
4,196,340	+		Echvi_3540	0.52	-2.0
4,196,340	+		Echvi_3540	0.52	-0.4
4,196,341	-		Echvi_3540	0.52	-0.3
4,196,341	-		Echvi_3540	0.52	-1.0
4,196,344	+		Echvi_3540	0.52	+0.0
4,196,345	-		Echvi_3540	0.52	+0.2
4,196,345	-		Echvi_3540	0.52	-0.4
4,196,391	+		Echvi_3540	0.54	+1.5
4,196,405	+		Echvi_3540	0.54	+0.9
4,196,405	+		Echvi_3540	0.54	-1.8
4,196,406	-		Echvi_3540	0.54	+1.3
4,196,498	-		Echvi_3540	0.57	+0.5
4,196,498	-		Echvi_3540	0.57	+0.0
4,196,498	-		Echvi_3540	0.57	+1.7
4,196,503	+		Echvi_3540	0.58	-1.6
4,196,504	-		Echvi_3540	0.58	+0.5
4,196,631	-		Echvi_3540	0.62	-0.3
4,196,663	+		Echvi_3540	0.63	-1.8
4,196,663	+		Echvi_3540	0.63	-1.1
4,196,663	+		Echvi_3540	0.63	+2.4
4,196,664	-		Echvi_3540	0.63	-1.3
4,196,664	-		Echvi_3540	0.63	+0.2
4,196,664	-		Echvi_3540	0.63	-1.1
4,196,707	+		Echvi_3540	0.64	-0.7
4,196,752	+		Echvi_3540	0.66	-0.5
4,196,752	+		Echvi_3540	0.66	-2.0
4,196,752	+		Echvi_3540	0.66	-0.6
4,196,752	+		Echvi_3540	0.66	+0.2
4,196,752	+		Echvi_3540	0.66	-1.4
4,196,752	+		Echvi_3540	0.66	+2.1
4,196,753	-		Echvi_3540	0.66	-1.1
4,196,753	-		Echvi_3540	0.66	-1.8
4,196,753	-		Echvi_3540	0.66	+0.3
4,196,753	-		Echvi_3540	0.66	-0.2
4,196,753	-		Echvi_3540	0.66	-0.1
4,196,753	-		Echvi_3540	0.66	-0.0
4,196,753	-		Echvi_3540	0.66	+0.7
4,196,833	+		Echvi_3540	0.68	+0.9
4,196,833	+		Echvi_3540	0.68	-0.0
4,196,836	-		Echvi_3540	0.69	-0.7
4,196,847	-		Echvi_3540	0.69	-1.3
4,196,852	-		Echvi_3540	0.69	+0.2
4,196,853	+		Echvi_3540	0.69	+0.8
4,196,853	+		Echvi_3540	0.69	-0.9
4,196,853	+		Echvi_3540	0.69	-0.2
4,196,853	+		Echvi_3540	0.69	+0.8
4,196,853	+		Echvi_3540	0.69	-1.0
4,196,854	-		Echvi_3540	0.69	-1.5
4,196,891	+		Echvi_3540	0.70	+0.3
4,196,891	+		Echvi_3540	0.70	+0.2
4,196,892	-		Echvi_3540	0.70	-1.6
4,196,892	-		Echvi_3540	0.70	+0.3
4,196,892	-		Echvi_3540	0.70	-0.6
4,196,892	-		Echvi_3540	0.70	+1.3
4,196,893	+		Echvi_3540	0.70	+1.0
4,196,969	+		Echvi_3540	0.73	-1.0
4,196,970	-		Echvi_3540	0.73	-0.3
4,196,970	-		Echvi_3540	0.73	+0.5
4,196,998	-		Echvi_3540	0.74	-0.6
4,197,018	-		Echvi_3540	0.75	+0.4
4,197,052	-		Echvi_3540	0.76	+1.1
4,197,058	-		Echvi_3540	0.76	-0.4
4,197,060	+		Echvi_3540	0.76	+1.0
4,197,060	+		Echvi_3540	0.76	+0.4
4,197,060	+		Echvi_3540	0.76	-0.6
4,197,060	+		Echvi_3540	0.76	+0.2
4,197,061	-		Echvi_3540	0.76	-1.4
4,197,061	-		Echvi_3540	0.76	+0.4
4,197,061	-		Echvi_3540	0.76	-0.9
4,197,061	-		Echvi_3540	0.76	-0.9
4,197,069	+		Echvi_3540	0.76	-2.1
4,197,070	-		Echvi_3540	0.76	+1.6
4,197,070	-		Echvi_3540	0.76	-1.3
4,197,076	-		Echvi_3540	0.77	+0.6
4,197,143	-		Echvi_3540	0.79	+0.3
4,197,145	-		Echvi_3540	0.79	-0.8
4,197,145	-		Echvi_3540	0.79	+0.4
4,197,145	-		Echvi_3540	0.79	-1.2
4,197,166	+		Echvi_3540	0.80	-0.3
4,197,167	-		Echvi_3540	0.80	-1.4
4,197,167	-		Echvi_3540	0.80	+0.3
4,197,185	+		Echvi_3540	0.80	-0.1
4,197,186	-		Echvi_3540	0.80	-2.2
4,197,196	-		Echvi_3540	0.81	-0.0
4,197,196	-		Echvi_3540	0.81	-1.1
4,197,196	-		Echvi_3540	0.81	+0.4
4,197,196	-		Echvi_3540	0.81	+0.4
4,197,208	+		Echvi_3540	0.81	+0.3
4,197,313	+		Echvi_3540	0.84	+0.1
4,197,314	-		Echvi_3540	0.84	-1.0
4,197,314	-		Echvi_3540	0.84	+1.1
4,197,314	-		Echvi_3540	0.84	+1.2
4,197,317	-		Echvi_3540	0.85	-0.0
4,197,340	-		Echvi_3540	0.85	-1.0
4,197,358	-		Echvi_3540	0.86	+1.0
4,197,382	-		Echvi_3540	0.87	+1.4
4,197,468	+		Echvi_3540	0.90	+0.6
4,197,468	+		Echvi_3540	0.90	+1.5
4,197,487	+				+0.8
4,197,488	-				+0.2
4,197,544	-				-1.2
4,197,544	-				+1.0
4,197,544	-				+1.1
4,197,544	-				-2.1
4,197,559	+				+1.2
4,197,559	+				-0.2
4,197,559	+				-0.3
4,197,560	-				-1.2
4,197,564	+				-1.4
4,197,591	+				+1.6
4,197,592	-				-0.7
4,197,629	+				+0.0
4,197,631	+				-2.5
4,197,631	+				-0.5
4,197,631	+				-1.8
4,197,631	+				-1.5
4,197,631	+				-1.4
4,197,632	-				-0.3
4,197,632	-				-0.6
4,197,632	-				+0.5
4,197,632	-				-0.5
4,197,632	-				-0.2
4,197,654	+				-2.0
4,197,654	+				-1.8
4,197,655	-				-0.7
4,197,655	-				-0.7
4,197,667	+				-0.7
4,197,668	-				-1.1
4,197,668	-				-0.6
4,197,670	-				+0.4
4,197,699	+				+1.2
4,197,751	-				-0.7
4,197,751	-				-1.5
4,197,755	-				+0.9
4,197,755	-				-1.6
4,197,756	+				+1.0
4,197,756	+				+0.3
4,197,757	-				+1.6
4,197,757	-				+0.1
4,197,774	+				+0.9
4,197,774	+				-0.8
4,197,775	-				+0.9
4,197,809	+				+0.8
4,197,823	-				+1.6
4,197,824	+				+0.0
4,197,824	+				+0.2
4,197,824	+				-0.8
4,197,824	+				-2.4
4,197,826	+				-0.6
4,197,826	+				+0.5
4,197,827	-				+0.3
4,197,827	-				-0.2
4,197,856	+				+0.9
4,197,856	+				+0.8
4,197,856	+				-0.5
4,197,858	+				-1.2
4,197,859	-				-0.6
4,197,888	+				-0.6
4,197,898	+				-0.2
4,197,901	+				-0.0
4,197,934	+				+1.5
4,197,934	+				-1.8
4,197,935	-				-1.2
4,197,935	-				+0.6
4,197,935	-				-0.2
4,198,059	+		Echvi_3541	0.16	+0.0
4,198,059	+		Echvi_3541	0.16	-1.4
4,198,060	-		Echvi_3541	0.17	-0.2
4,198,075	-		Echvi_3541	0.17	-0.5
4,198,226	-		Echvi_3541	0.27	+0.3
4,198,263	+		Echvi_3541	0.29	+0.5
4,198,263	+		Echvi_3541	0.29	-0.2
4,198,324	+		Echvi_3541	0.33	+0.3
4,198,415	+		Echvi_3541	0.39	+1.1
4,198,419	+		Echvi_3541	0.39	+0.4
4,198,419	+		Echvi_3541	0.39	+0.1
4,198,420	-		Echvi_3541	0.39	-0.3
4,198,485	+		Echvi_3541	0.43	+0.2
4,198,485	+		Echvi_3541	0.43	+1.1
4,198,485	+		Echvi_3541	0.43	+0.3
4,198,485	+		Echvi_3541	0.43	-1.2
4,198,486	-		Echvi_3541	0.43	+0.0
4,198,486	-		Echvi_3541	0.43	+1.9
4,198,568	+		Echvi_3541	0.48	-1.4
4,198,569	-		Echvi_3541	0.48	+1.2
4,198,572	+		Echvi_3541	0.49	-1.0
4,198,573	-		Echvi_3541	0.49	-0.2
4,198,586	+		Echvi_3541	0.49	+1.3
4,198,587	-		Echvi_3541	0.49	+2.4
4,198,601	+		Echvi_3541	0.50	+0.9
4,198,616	+		Echvi_3541	0.51	-0.2
4,198,658	+		Echvi_3541	0.54	-0.2
4,198,658	+		Echvi_3541	0.54	-1.6
4,198,659	-		Echvi_3541	0.54	+0.1
4,198,659	-		Echvi_3541	0.54	-2.5
4,198,659	-		Echvi_3541	0.54	-0.1
4,198,660	+		Echvi_3541	0.54	-0.0
4,198,660	+		Echvi_3541	0.54	+0.2
4,198,660	+		Echvi_3541	0.54	-0.5
4,198,660	+		Echvi_3541	0.54	+0.6
4,198,661	-		Echvi_3541	0.54	-0.9
4,198,661	-		Echvi_3541	0.54	-0.4
4,198,661	-		Echvi_3541	0.54	+0.9
4,198,661	-		Echvi_3541	0.54	-0.0
4,198,661	-		Echvi_3541	0.54	+0.4
4,198,663	+		Echvi_3541	0.54	-0.2
4,198,663	+		Echvi_3541	0.54	+0.7
4,198,663	+		Echvi_3541	0.54	-0.2
4,198,664	-		Echvi_3541	0.54	-0.8
4,198,664	-		Echvi_3541	0.54	+0.3
4,198,664	-		Echvi_3541	0.54	+0.1
4,198,667	+		Echvi_3541	0.54	-0.6
4,198,668	-		Echvi_3541	0.54	-0.3
4,198,668	-		Echvi_3541	0.54	+0.8
4,198,707	-		Echvi_3541	0.57	+0.8
4,198,730	+		Echvi_3541	0.58	-0.0
4,198,761	+		Echvi_3541	0.60	-0.3
4,198,761	+		Echvi_3541	0.60	-0.7
4,198,762	-		Echvi_3541	0.60	+0.0
4,198,762	-		Echvi_3541	0.60	-2.3
4,198,762	-		Echvi_3541	0.60	-0.8