Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2766

Experiment: D-Salicin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Salicin (C)
3,299,033	+		Echvi_2765	0.11	-0.4
3,299,033	+		Echvi_2765	0.11	+0.8
3,299,034	-		Echvi_2765	0.11	-1.7
3,299,044	+		Echvi_2765	0.12	+0.1
3,299,045	-		Echvi_2765	0.12	+0.6
3,299,049	+		Echvi_2765	0.12	+1.1
3,299,049	+		Echvi_2765	0.12	+0.1
3,299,050	-		Echvi_2765	0.12	+0.2
3,299,111	-		Echvi_2765	0.18	-2.1
3,299,186	+		Echvi_2765	0.25	+0.2
3,299,277	-		Echvi_2765	0.34	+2.8
3,299,277	-		Echvi_2765	0.34	-1.2
3,299,292	+		Echvi_2765	0.35	+0.2
3,299,293	-		Echvi_2765	0.35	+0.8
3,299,293	-		Echvi_2765	0.35	-0.2
3,299,296	+		Echvi_2765	0.35	-0.1
3,299,297	-		Echvi_2765	0.36	+0.3
3,299,297	-		Echvi_2765	0.36	+1.8
3,299,297	-		Echvi_2765	0.36	-0.4
3,299,297	-		Echvi_2765	0.36	+1.0
3,299,297	-		Echvi_2765	0.36	+0.6
3,299,380	+		Echvi_2765	0.43	-0.3
3,299,414	+		Echvi_2765	0.47	+0.5
3,299,415	-		Echvi_2765	0.47	+0.5
3,299,437	+		Echvi_2765	0.49	-0.5
3,299,489	+		Echvi_2765	0.54	+1.0
3,299,490	-		Echvi_2765	0.54	+1.5
3,299,490	-		Echvi_2765	0.54	-0.1
3,299,490	-		Echvi_2765	0.54	-2.0
3,299,491	+		Echvi_2765	0.54	+0.2
3,299,491	+		Echvi_2765	0.54	+0.3
3,299,491	+		Echvi_2765	0.54	+0.9
3,299,491	+		Echvi_2765	0.54	+0.4
3,299,491	+		Echvi_2765	0.54	+0.2
3,299,491	+		Echvi_2765	0.54	-1.3
3,299,491	+		Echvi_2765	0.54	-0.1
3,299,491	+		Echvi_2765	0.54	+0.6
3,299,491	+		Echvi_2765	0.54	+0.5
3,299,491	+		Echvi_2765	0.54	-0.8
3,299,491	+		Echvi_2765	0.54	-1.3
3,299,491	+		Echvi_2765	0.54	-0.5
3,299,491	+		Echvi_2765	0.54	-0.4
3,299,492	-		Echvi_2765	0.54	-0.4
3,299,492	-		Echvi_2765	0.54	-2.0
3,299,492	-		Echvi_2765	0.54	+0.3
3,299,492	-		Echvi_2765	0.54	-0.1
3,299,492	-		Echvi_2765	0.54	-0.7
3,299,492	-		Echvi_2765	0.54	+0.0
3,299,492	-		Echvi_2765	0.54	+0.5
3,299,492	-		Echvi_2765	0.54	+0.2
3,299,492	-		Echvi_2765	0.54	-0.1
3,299,572	+		Echvi_2765	0.61	+0.6
3,299,572	+		Echvi_2765	0.61	-0.9
3,299,573	-		Echvi_2765	0.62	-0.5
3,299,573	-		Echvi_2765	0.62	+0.9
3,299,573	-		Echvi_2765	0.62	+0.5
3,299,573	-		Echvi_2765	0.62	+1.0
3,299,573	-		Echvi_2765	0.62	-0.2
3,299,575	-		Echvi_2765	0.62	+0.0
3,299,581	-		Echvi_2765	0.62	+0.9
3,299,593	+		Echvi_2765	0.63	+0.3
3,299,810	+		Echvi_2765	0.84	-0.4
3,299,847	-		Echvi_2765	0.87	+2.4
3,299,869	-		Echvi_2765	0.89	+0.5
3,299,875	-		Echvi_2765	0.90	-0.8
3,299,875	-		Echvi_2765	0.90	+0.6
3,299,880	+				-0.6
3,299,880	+				-2.2
3,299,881	-				-0.1
3,299,881	-				+0.6
3,299,881	-				+0.0
3,299,956	-				+1.2
3,299,956	-				-1.4
3,299,981	-				-1.0
3,299,981	-				-0.7
3,299,992	-				+0.6
3,300,003	+				-3.5
3,300,010	+				-0.8
3,300,010	+				-0.2
3,300,010	+				-0.0
3,300,010	+				+0.2
3,300,010	+				+0.0
3,300,011	-				-0.2
3,300,014	+				-0.3
3,300,015	-				-0.4
3,300,078	+				+0.1
3,300,130	+				-1.2
3,300,170	-				-1.6
3,300,191	-				+0.3
3,300,191	-				-0.7
3,300,193	+				+0.1
3,300,291	+		Echvi_2766	0.13	+0.0
3,300,358	+		Echvi_2766	0.17	-0.8
3,300,359	-		Echvi_2766	0.17	+0.2
3,300,359	-		Echvi_2766	0.17	+0.5
3,300,409	-		Echvi_2766	0.19	+0.4
3,300,433	+		Echvi_2766	0.20	-1.7
3,300,437	-		Echvi_2766	0.20	-0.3
3,300,560	+		Echvi_2766	0.26	-0.2
3,300,561	-		Echvi_2766	0.26	+1.6
3,300,627	-		Echvi_2766	0.30	-1.4
3,300,627	-		Echvi_2766	0.30	-0.6
3,300,688	+		Echvi_2766	0.32	-0.3
3,300,697	+		Echvi_2766	0.33	-1.6
3,300,773	+		Echvi_2766	0.36	+0.0
3,300,773	+		Echvi_2766	0.36	-0.3
3,300,774	-		Echvi_2766	0.37	-1.6
3,300,774	-		Echvi_2766	0.37	+0.6
3,300,774	-		Echvi_2766	0.37	-1.0
3,300,774	-		Echvi_2766	0.37	-0.4
3,300,785	+		Echvi_2766	0.37	-0.9
3,300,785	+		Echvi_2766	0.37	+1.3
3,300,785	+		Echvi_2766	0.37	+0.6
3,300,786	-		Echvi_2766	0.37	-0.9
3,300,790	-		Echvi_2766	0.37	-1.7
3,300,808	+		Echvi_2766	0.38	-0.1
3,300,809	-		Echvi_2766	0.38	+0.0
3,300,809	-		Echvi_2766	0.38	-0.3
3,300,863	-		Echvi_2766	0.41	+0.0
3,300,865	+		Echvi_2766	0.41	-0.3
3,300,993	-		Echvi_2766	0.47	-1.6
3,300,993	-		Echvi_2766	0.47	-1.7
3,300,993	-		Echvi_2766	0.47	-0.5
3,301,012	+		Echvi_2766	0.48	+0.8
3,301,013	-		Echvi_2766	0.48	+0.4
3,301,096	-		Echvi_2766	0.52	-0.8
3,301,096	-		Echvi_2766	0.52	-0.2
3,301,123	+		Echvi_2766	0.53	+1.2
3,301,264	+		Echvi_2766	0.60	+0.6
3,301,488	-		Echvi_2766	0.71	-0.3
3,301,488	-		Echvi_2766	0.71	-0.7
3,301,603	+		Echvi_2766	0.76	-1.2
3,301,632	+		Echvi_2766	0.78	-3.3
3,301,680	-		Echvi_2766	0.80	-1.9
3,301,876	+		Echvi_2766	0.89	-0.5
3,301,877	-		Echvi_2766	0.89	+1.3
3,301,877	-		Echvi_2766	0.89	-1.2
3,301,949	-				-0.7
3,302,092	-				+0.5
3,302,105	+				-0.3
3,302,105	+				+0.4
3,302,106	-				-0.9
3,302,106	-				+1.2
3,302,108	+				+0.6
3,302,108	+				-1.2
3,302,119	+				+1.6
3,302,120	-				-0.1
3,302,122	+				+0.3
3,302,123	-				+0.1
3,302,126	+				-0.8
3,302,127	-				-0.7
3,302,162	-				+0.5
3,302,162	-				+0.4
3,302,190	+				+1.0
3,302,190	+				+1.6
3,302,192	+				+0.3
3,302,193	-				+0.6
3,302,193	-				-2.2
3,302,193	-				-1.4
3,302,250	-				-1.2
3,302,256	-				+0.4
3,302,262	-				+0.3
3,302,281	+				-0.3
3,302,284	+				-0.7
3,302,284	+				+0.1
3,302,285	-				-1.6
3,302,349	+				-0.5
3,302,448	-				-0.4
3,302,451	+				-1.2
3,302,452	-				+0.6
3,302,452	-				+0.6
3,302,457	+				+0.0
3,302,458	-				+1.2
3,302,458	-				+1.0
3,302,458	-				+0.3
3,302,556	-				+0.0
3,302,556	-				+0.3
3,302,556	-				-1.0
3,302,559	-				-1.7
3,302,631	-				-0.4
3,302,713	+		Echvi_2767	0.12	-0.7
3,302,714	-		Echvi_2767	0.12	-0.7
3,302,729	-		Echvi_2767	0.12	-0.2
3,302,761	+		Echvi_2767	0.13	-0.4
3,302,761	+		Echvi_2767	0.13	-0.7
3,302,762	-		Echvi_2767	0.13	-1.6
3,302,763	+		Echvi_2767	0.13	-0.4
3,302,763	+		Echvi_2767	0.13	+0.1
3,302,771	-		Echvi_2767	0.13	-0.4
3,302,849	+		Echvi_2767	0.15	+0.9
3,303,037	+		Echvi_2767	0.20	-1.0