Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1906

Experiment: D-Salicin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Salicin (C)
2,234,623	+				-0.6
2,234,624	-				-1.1
2,234,688	+		Echvi_1904	0.13	+0.5
2,234,688	+		Echvi_1904	0.13	-0.5
2,234,688	+		Echvi_1904	0.13	-1.8
2,234,689	-		Echvi_1904	0.13	-0.9
2,234,689	-		Echvi_1904	0.13	+0.8
2,234,689	-		Echvi_1904	0.13	+0.6
2,234,689	-		Echvi_1904	0.13	+0.3
2,234,856	-		Echvi_1904	0.41	-0.3
2,234,927	+		Echvi_1904	0.53	-0.3
2,234,927	+		Echvi_1904	0.53	-0.5
2,234,952	+		Echvi_1904	0.58	+0.5
2,234,953	-		Echvi_1904	0.58	-0.5
2,234,980	+		Echvi_1904	0.62	+0.0
2,234,981	-		Echvi_1904	0.62	-0.3
2,235,041	+		Echvi_1904	0.73	+0.0
2,235,175	-				+0.2
2,235,346	+				+0.7
2,235,346	+				-0.1
2,235,346	+				+1.0
2,235,347	-				-0.3
2,235,347	-				-0.0
2,235,352	+				-2.3
2,235,352	+				-0.1
2,235,353	-				+1.7
2,235,361	+				-0.8
2,235,561	+				-1.5
2,235,561	+				-0.3
2,235,561	+				-0.7
2,235,561	+				-1.7
2,235,562	-				-0.6
2,235,565	+				+1.3
2,235,565	+				+0.1
2,235,565	+				+0.0
2,235,565	+				+0.1
2,235,565	+				-1.0
2,235,566	-				+1.7
2,235,566	-				-0.2
2,235,566	-				+0.1
2,235,569	+				-0.5
2,235,569	+				-0.5
2,235,570	-				-1.0
2,235,574	+				-0.2
2,235,574	+				-0.3
2,235,575	-				+0.7
2,235,590	-				+2.4
2,235,594	+				-0.3
2,235,594	+				+1.7
2,235,594	+				-1.1
2,235,594	+				-0.3
2,235,595	-				-0.1
2,235,598	+				+0.1
2,235,598	+				-2.0
2,235,598	+				+0.9
2,235,726	+				-2.0
2,235,727	-				-0.8
2,235,742	+				+0.7
2,235,744	+				+1.7
2,235,744	+				+0.5
2,235,843	+				+3.1
2,235,843	+				-0.5
2,235,843	+				-0.4
2,235,844	-				+1.0
2,235,844	-				-1.5
2,235,853	+				-1.5
2,235,910	+				-0.5
2,235,958	+		Echvi_1906	0.10	-0.1
2,235,958	+		Echvi_1906	0.10	-1.5
2,235,958	+		Echvi_1906	0.10	-1.6
2,235,958	+		Echvi_1906	0.10	+1.3
2,235,959	-		Echvi_1906	0.10	-1.0
2,235,960	+		Echvi_1906	0.10	+0.4
2,235,960	+		Echvi_1906	0.10	+1.9
2,235,961	-		Echvi_1906	0.11	+0.2
2,235,961	-		Echvi_1906	0.11	+1.5
2,235,961	-		Echvi_1906	0.11	+0.1
2,235,961	-		Echvi_1906	0.11	-2.0
2,235,975	-		Echvi_1906	0.11	+1.3
2,235,976	+		Echvi_1906	0.11	-1.1
2,236,009	+		Echvi_1906	0.12	-0.9
2,236,010	-		Echvi_1906	0.12	-0.1
2,236,017	-		Echvi_1906	0.12	+0.0
2,236,113	+		Echvi_1906	0.15	-0.1
2,236,114	-		Echvi_1906	0.15	+0.8
2,236,126	+		Echvi_1906	0.15	-1.2
2,236,126	+		Echvi_1906	0.15	+0.6
2,236,126	+		Echvi_1906	0.15	-0.4
2,236,151	+		Echvi_1906	0.16	-0.6
2,236,204	-		Echvi_1906	0.17	-0.1
2,236,306	+		Echvi_1906	0.20	+0.1
2,236,307	-		Echvi_1906	0.20	-0.0
2,236,467	+		Echvi_1906	0.25	-0.6
2,236,468	-		Echvi_1906	0.25	+0.1
2,236,468	-		Echvi_1906	0.25	+1.3
2,236,523	+		Echvi_1906	0.26	+1.2
2,236,612	+		Echvi_1906	0.29	+1.0
2,236,613	-		Echvi_1906	0.29	+1.2
2,236,616	-		Echvi_1906	0.29	+0.4
2,236,656	-		Echvi_1906	0.30	-0.8
2,236,659	-		Echvi_1906	0.30	-2.3
2,236,660	+		Echvi_1906	0.30	-1.0
2,236,735	+		Echvi_1906	0.32	-0.8
2,236,736	-		Echvi_1906	0.32	-0.5
2,236,831	-		Echvi_1906	0.35	-1.3
2,236,974	-		Echvi_1906	0.39	-0.1
2,237,080	-		Echvi_1906	0.42	-0.5
2,237,309	+		Echvi_1906	0.48	-1.1
2,237,309	+		Echvi_1906	0.48	-0.0
2,237,333	+		Echvi_1906	0.49	-0.1
2,237,333	+		Echvi_1906	0.49	-0.0
2,237,333	+		Echvi_1906	0.49	-0.0
2,237,334	-		Echvi_1906	0.49	+0.3
2,237,459	+		Echvi_1906	0.52	-0.4
2,237,459	+		Echvi_1906	0.52	-0.1
2,237,460	-		Echvi_1906	0.52	-0.0
2,237,460	-		Echvi_1906	0.52	-0.4
2,237,465	-		Echvi_1906	0.52	-3.3
2,237,479	+		Echvi_1906	0.53	-0.6
2,237,480	-		Echvi_1906	0.53	-0.2
2,237,480	-		Echvi_1906	0.53	-0.8
2,237,480	-		Echvi_1906	0.53	+0.7
2,237,480	-		Echvi_1906	0.53	-0.1
2,237,519	-		Echvi_1906	0.54	-0.3
2,237,601	-		Echvi_1906	0.56	-0.2
2,237,721	-		Echvi_1906	0.59	+0.3
2,237,722	+		Echvi_1906	0.59	-0.1
2,237,723	-		Echvi_1906	0.59	-2.2
2,237,723	-		Echvi_1906	0.59	-2.0
2,237,728	+		Echvi_1906	0.59	-0.9
2,237,773	-		Echvi_1906	0.61	-1.9
2,237,794	+		Echvi_1906	0.61	+0.4
2,237,823	-		Echvi_1906	0.62	-1.2
2,237,891	+		Echvi_1906	0.64	+0.0
2,237,966	+		Echvi_1906	0.66	-0.1
2,237,966	+		Echvi_1906	0.66	+0.5
2,238,033	+		Echvi_1906	0.68	-1.2
2,238,034	-		Echvi_1906	0.68	-1.1
2,238,042	-		Echvi_1906	0.68	+0.2
2,238,042	-		Echvi_1906	0.68	-0.3
2,238,042	-		Echvi_1906	0.68	-1.8
2,238,042	-		Echvi_1906	0.68	+0.4
2,238,042	-		Echvi_1906	0.68	-0.3
2,238,042	-		Echvi_1906	0.68	+0.7
2,238,044	-		Echvi_1906	0.68	+0.1
2,238,074	+		Echvi_1906	0.69	-0.1
2,238,075	-		Echvi_1906	0.69	-0.3
2,238,095	-		Echvi_1906	0.70	+1.0
2,238,096	+		Echvi_1906	0.70	+0.3
2,238,097	-		Echvi_1906	0.70	-0.9
2,238,141	-		Echvi_1906	0.71	+0.1
2,238,209	+		Echvi_1906	0.73	+0.6
2,238,313	-		Echvi_1906	0.76	-2.9
2,238,313	-		Echvi_1906	0.76	+0.5
2,238,440	-		Echvi_1906	0.79	-2.2
2,238,440	-		Echvi_1906	0.79	-0.2
2,238,440	-		Echvi_1906	0.79	+0.6
2,238,470	+		Echvi_1906	0.80	-1.2
2,238,471	-		Echvi_1906	0.80	-1.3
2,238,471	-		Echvi_1906	0.80	+0.2
2,238,471	-		Echvi_1906	0.80	+0.4
2,238,472	+		Echvi_1906	0.80	-2.4
2,238,472	+		Echvi_1906	0.80	-1.8
2,238,473	-		Echvi_1906	0.80	+0.7
2,238,473	-		Echvi_1906	0.80	+0.3
2,238,473	-		Echvi_1906	0.80	+0.1
2,238,473	-		Echvi_1906	0.80	-0.1
2,238,474	+		Echvi_1906	0.80	-0.2
2,238,475	-		Echvi_1906	0.80	-0.8
2,238,475	-		Echvi_1906	0.80	+1.5
2,238,490	+		Echvi_1906	0.81	-0.1
2,238,490	+		Echvi_1906	0.81	+1.3
2,238,994	+				-1.0
2,239,052	+				-0.1
2,239,130	+				-3.4
2,239,131	-				-0.3
2,239,131	-				-0.0
2,239,132	+				-0.1
2,239,133	-				+0.1
2,239,133	-				-0.2
2,239,133	-				-0.2
2,239,208	+				-0.5
2,239,209	-				+0.1
2,239,217	+				-0.6
2,239,218	-				+0.1
2,239,230	-				+0.9
2,239,247	-				+0.0
2,239,328	+				-0.6
2,239,328	+				-0.0
2,239,329	-				+0.1
2,239,329	-				+0.6
2,239,329	-				+2.7
2,239,330	+				+1.0
2,239,331	-				+0.1
2,239,439	-		Echvi_1907	0.14	-0.1
2,239,490	+		Echvi_1907	0.17	+0.3
2,239,541	-		Echvi_1907	0.21	+0.1
2,239,641	-		Echvi_1907	0.28	-0.4
2,239,641	-		Echvi_1907	0.28	+1.6
2,239,648	+		Echvi_1907	0.29	+0.5
2,239,648	+		Echvi_1907	0.29	-0.3
2,239,648	+		Echvi_1907	0.29	+0.8
2,239,706	+		Echvi_1907	0.33	+0.9
2,239,732	+		Echvi_1907	0.35	-0.5
2,239,733	-		Echvi_1907	0.35	-0.5
2,239,733	-		Echvi_1907	0.35	+0.2
2,239,876	+		Echvi_1907	0.46	-0.5
2,239,918	+		Echvi_1907	0.49	-0.3
2,239,987	+		Echvi_1907	0.54	-1.3
2,239,988	-		Echvi_1907	0.54	-1.9
2,239,988	-		Echvi_1907	0.54	+0.2
2,240,099	+		Echvi_1907	0.62	+0.1
2,240,099	+		Echvi_1907	0.62	+0.3
2,240,099	+		Echvi_1907	0.62	+1.0
2,240,100	-		Echvi_1907	0.62	-1.5
2,240,165	+		Echvi_1907	0.67	+0.7
2,240,166	-		Echvi_1907	0.67	+0.2
2,240,166	-		Echvi_1907	0.67	-0.3