Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21450 and CA264_21455 are separated by 65 nucleotides CA264_21455 and CA264_21460 are separated by 74 nucleotides
CA264_21450: CA264_21450 - hypothetical protein, at 156,223 to 157,485
_21450
CA264_21455: CA264_21455 - hypothetical protein, at 157,551 to 158,864
_21455
CA264_21460: CA264_21460 - hypothetical protein, at 158,939 to 160,138
_21460
Position (kb) 157
158
159 Strain fitness (log2 ratio) -2
-1
0
1
2 at 156.611 kb on - strand, within CA264_21450 at 156.613 kb on - strand, within CA264_21450 at 156.613 kb on - strand, within CA264_21450 at 156.644 kb on - strand, within CA264_21450 at 156.700 kb on - strand, within CA264_21450 at 156.710 kb on - strand, within CA264_21450 at 156.732 kb on - strand, within CA264_21450 at 156.745 kb on - strand, within CA264_21450 at 157.623 kb on - strand at 157.648 kb on - strand at 157.725 kb on - strand, within CA264_21455 at 157.876 kb on - strand, within CA264_21455 at 157.876 kb on - strand, within CA264_21455 at 157.940 kb on - strand, within CA264_21455 at 157.947 kb on - strand, within CA264_21455 at 158.027 kb on - strand, within CA264_21455 at 158.029 kb on - strand, within CA264_21455 at 158.151 kb on - strand, within CA264_21455 at 158.348 kb on - strand, within CA264_21455 at 158.362 kb on - strand, within CA264_21455 at 158.362 kb on - strand, within CA264_21455 at 159.039 kb on - strand at 159.039 kb on - strand at 159.041 kb on - strand at 159.041 kb on - strand at 159.050 kb on - strand at 159.227 kb on - strand, within CA264_21460 at 159.233 kb on - strand, within CA264_21460 at 159.239 kb on - strand, within CA264_21460
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 156,611 - CA264_21450 0.31 +0.6 156,613 - CA264_21450 0.31 -0.7 156,613 - CA264_21450 0.31 -0.3 156,644 - CA264_21450 0.33 -1.5 156,700 - CA264_21450 0.38 -0.4 156,710 - CA264_21450 0.39 -0.5 156,732 - CA264_21450 0.40 -1.3 156,745 - CA264_21450 0.41 -0.2 157,623 - +0.4 157,648 - +0.2 157,725 - CA264_21455 0.13 +0.6 157,876 - CA264_21455 0.25 -0.1 157,876 - CA264_21455 0.25 +0.1 157,940 - CA264_21455 0.30 +1.9 157,947 - CA264_21455 0.30 +0.1 158,027 - CA264_21455 0.36 -1.4 158,029 - CA264_21455 0.36 +0.0 158,151 - CA264_21455 0.46 +1.6 158,348 - CA264_21455 0.61 +1.2 158,362 - CA264_21455 0.62 -0.4 158,362 - CA264_21455 0.62 -0.3 159,039 - +1.1 159,039 - +0.4 159,041 - -0.8 159,041 - +0.9 159,050 - -0.7 159,227 - CA264_21460 0.24 +0.0 159,233 - CA264_21460 0.24 -2.0 159,239 - CA264_21460 0.25 +0.6
Or see this region's nucleotide sequence