Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17790 and CA264_17795 overlap by 1 nucleotides CA264_17795 and CA264_17800 are separated by 185 nucleotides CA264_17800 and CA264_17805 are separated by 137 nucleotides CA264_17805 and CA264_17810 are separated by 210 nucleotides
CA264_17790: CA264_17790 - hypothetical protein, at 4,137,128 to 4,138,066
_17790
CA264_17795: CA264_17795 - dephospho-CoA kinase, at 4,138,066 to 4,138,662
_17795
CA264_17800: CA264_17800 - tRNA-Val, at 4,138,848 to 4,138,922
_17800
CA264_17805: CA264_17805 - tRNA-Val, at 4,139,060 to 4,139,137
_17805
CA264_17810: CA264_17810 - hypothetical protein, at 4,139,348 to 4,141,834
_17810
Position (kb)
4138
4139 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4137.935 kb on - strand, within CA264_17790 at 4137.960 kb on - strand, within CA264_17790 at 4137.960 kb on - strand, within CA264_17790 at 4138.023 kb on + strand at 4138.024 kb on - strand at 4138.024 kb on - strand at 4138.024 kb on - strand at 4138.024 kb on - strand at 4138.066 kb on - strand at 4138.077 kb on - strand at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.741 kb on - strand at 4138.760 kb on + strand at 4138.760 kb on + strand at 4138.762 kb on + strand at 4138.762 kb on + strand at 4138.763 kb on - strand at 4138.763 kb on - strand at 4138.886 kb on + strand, within CA264_17800 at 4138.887 kb on - strand, within CA264_17800 at 4138.915 kb on - strand at 4138.915 kb on - strand at 4139.025 kb on - strand at 4139.254 kb on + strand at 4139.268 kb on + strand at 4139.268 kb on + strand at 4139.279 kb on + strand at 4139.294 kb on + strand at 4139.304 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.409 kb on - strand at 4139.427 kb on + strand at 4139.509 kb on + strand at 4139.510 kb on - strand at 4139.608 kb on + strand, within CA264_17810 at 4139.609 kb on - strand, within CA264_17810 at 4139.649 kb on + strand, within CA264_17810 at 4139.650 kb on - strand, within CA264_17810 at 4139.650 kb on - strand, within CA264_17810 at 4139.660 kb on + strand, within CA264_17810 at 4139.682 kb on - strand, within CA264_17810
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 4,137,935 - CA264_17790 0.86 -0.9 4,137,960 - CA264_17790 0.89 -0.0 4,137,960 - CA264_17790 0.89 -0.4 4,138,023 + +0.1 4,138,024 - -0.1 4,138,024 - -0.3 4,138,024 - -0.4 4,138,024 - -0.1 4,138,066 - +0.9 4,138,077 - -0.9 4,138,732 + -0.1 4,138,732 + +1.3 4,138,732 + -0.6 4,138,732 + +0.3 4,138,741 - -0.3 4,138,760 + +0.4 4,138,760 + +0.6 4,138,762 + -0.1 4,138,762 + -0.4 4,138,763 - +0.7 4,138,763 - -1.6 4,138,886 + CA264_17800 0.51 -0.1 4,138,887 - CA264_17800 0.52 -0.2 4,138,915 - +0.6 4,138,915 - -0.4 4,139,025 - +2.3 4,139,254 + -0.4 4,139,268 + -0.3 4,139,268 + -0.4 4,139,279 + +0.0 4,139,294 + +0.4 4,139,304 + -0.4 4,139,408 + -1.5 4,139,408 + +0.6 4,139,408 + -0.4 4,139,408 + -1.1 4,139,408 + -0.2 4,139,408 + -0.6 4,139,408 + +0.0 4,139,408 + +0.3 4,139,409 - -0.0 4,139,427 + -0.4 4,139,509 + -1.3 4,139,510 - -0.9 4,139,608 + CA264_17810 0.10 -0.5 4,139,609 - CA264_17810 0.10 -2.2 4,139,649 + CA264_17810 0.12 -0.9 4,139,650 - CA264_17810 0.12 -0.5 4,139,650 - CA264_17810 0.12 -2.5 4,139,660 + CA264_17810 0.13 +0.9 4,139,682 - CA264_17810 0.13 -0.7
Or see this region's nucleotide sequence