Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16960

Experiment: m.b. Nalidixic 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.016 mg/ml
3,946,788	-				-0.7
3,946,799	+				-0.8
3,946,822	+				+1.1
3,946,888	-		CA264_16955	0.14	-2.0
3,946,973	+		CA264_16955	0.29	+0.5
3,947,095	+		CA264_16955	0.49	-0.5
3,947,098	+		CA264_16955	0.50	-1.0
3,947,099	-		CA264_16955	0.50	-0.9
3,947,099	-		CA264_16955	0.50	-0.1
3,947,099	-		CA264_16955	0.50	-0.4
3,947,183	-		CA264_16955	0.65	-0.7
3,947,183	-		CA264_16955	0.65	-0.8
3,947,183	-		CA264_16955	0.65	-0.8
3,947,217	-		CA264_16955	0.70	-0.8
3,947,276	+		CA264_16955	0.81	-0.6
3,947,309	+		CA264_16955	0.86	-0.1
3,947,310	-		CA264_16955	0.86	-1.1
3,947,317	+		CA264_16955	0.88	-1.3
3,947,317	+		CA264_16955	0.88	-0.7
3,947,318	-		CA264_16955	0.88	-0.8
3,947,319	+		CA264_16955	0.88	+0.8
3,947,387	-				-0.3
3,947,387	-				-1.2
3,947,398	+				-0.6
3,947,399	-				-0.6
3,947,402	-				-0.8
3,947,456	-				+1.3
3,947,456	-				-2.0
3,947,456	-				+0.1
3,947,457	+				+0.1
3,947,647	+		CA264_16960	0.12	-0.6
3,947,647	+		CA264_16960	0.12	+0.6
3,947,696	+		CA264_16960	0.15	-0.4
3,947,718	-		CA264_16960	0.17	-0.6
3,947,722	-		CA264_16960	0.17	-0.3
3,947,830	-		CA264_16960	0.24	-0.0
3,947,947	-		CA264_16960	0.32	-0.8
3,947,970	-		CA264_16960	0.33	-0.1
3,948,109	-		CA264_16960	0.43	+0.6
3,948,153	+		CA264_16960	0.46	+1.9
3,948,153	+		CA264_16960	0.46	-0.8
3,948,154	-		CA264_16960	0.46	-1.5
3,948,154	-		CA264_16960	0.46	-0.2
3,948,279	+		CA264_16960	0.54	-0.7
3,948,280	-		CA264_16960	0.54	+0.2
3,948,408	+		CA264_16960	0.62	-1.0
3,948,473	+		CA264_16960	0.67	-0.3
3,948,474	-		CA264_16960	0.67	-0.8
3,948,521	-		CA264_16960	0.70	-0.9
3,948,535	+		CA264_16960	0.71	-1.0
3,948,601	+		CA264_16960	0.75	+0.1
3,948,640	-		CA264_16960	0.78	-0.4
3,948,657	+		CA264_16960	0.79	-0.5
3,948,657	+		CA264_16960	0.79	-1.2
3,948,657	+		CA264_16960	0.79	-0.6
3,948,658	-		CA264_16960	0.79	+0.2
3,948,658	-		CA264_16960	0.79	-0.7
3,948,664	+		CA264_16960	0.80	-1.1
3,948,665	-		CA264_16960	0.80	-0.5
3,948,676	+		CA264_16960	0.80	+0.0
3,948,677	-		CA264_16960	0.80	-1.2
3,948,691	+		CA264_16960	0.81	-0.1
3,948,696	-		CA264_16960	0.82	+1.3
3,948,722	-		CA264_16960	0.83	-0.5
3,948,722	-		CA264_16960	0.83	-1.8
3,948,722	-		CA264_16960	0.83	+0.1
3,948,722	-		CA264_16960	0.83	-0.6
3,948,733	+		CA264_16960	0.84	-0.3
3,948,771	+		CA264_16960	0.87	+0.7
3,948,771	+		CA264_16960	0.87	-0.3
3,948,772	-		CA264_16960	0.87	-1.0
3,948,772	-		CA264_16960	0.87	+0.2
3,948,777	-		CA264_16960	0.87	-1.2
3,948,886	+				+0.2
3,948,886	+				+0.2
3,948,909	+				+0.0
3,948,910	-				-0.5
3,948,990	-				-0.5
3,948,994	-				-0.3
3,948,994	-				+0.2
3,949,008	+				+0.1
3,949,012	+				-2.1
3,949,013	-				-0.7
3,949,014	+				-0.2
3,949,015	-				-0.1
3,949,127	-		CA264_16965	0.15	-0.3
3,949,170	-		CA264_16965	0.26	+1.2
3,949,173	+		CA264_16965	0.26	+1.4
3,949,173	+		CA264_16965	0.26	-0.3
3,949,173	+		CA264_16965	0.26	+0.8
3,949,237	-		CA264_16965	0.42	+0.3
3,949,249	+		CA264_16965	0.45	+0.6
3,949,330	-		CA264_16965	0.64	-1.3
3,949,349	+		CA264_16965	0.68	+0.2
3,949,349	+		CA264_16965	0.68	+0.2
3,949,350	-		CA264_16965	0.69	-0.2
3,949,350	-		CA264_16965	0.69	-0.4
3,949,383	+		CA264_16965	0.76	-0.3
3,949,383	+		CA264_16965	0.76	+0.2
3,949,462	-				-0.4
3,949,481	+				-0.2
3,949,482	-				-0.2
3,949,487	+				-0.7
3,949,487	+				+0.2
3,949,488	-				-0.3
3,949,541	+				+0.1
3,949,542	-				-0.3
3,949,543	+				-1.2
3,949,544	-				-0.5
3,949,544	-				-0.0
3,949,544	-				-0.1
3,949,544	-				+0.3
3,949,547	+				+0.1
3,949,547	+				+0.6
3,949,547	+				-0.2
3,949,548	-				-0.2
3,949,548	-				+0.3
3,949,549	+				-0.3
3,949,549	+				-0.6
3,949,550	-				-0.4
3,949,583	+				+0.5
3,949,595	-				+0.0
3,949,611	+				-0.2
3,949,612	-				-0.8
3,949,612	-				-0.1
3,949,615	+				-0.6
3,949,616	-				+0.7
3,949,643	-				-0.4
3,949,643	-				-1.4
3,949,643	-				-0.1
3,949,647	+				-0.3
3,949,656	-				-0.8
3,949,759	+				-0.7
3,949,760	-				+0.1
3,949,773	-				-0.4