Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15345 and CA264_15350 are separated by 9 nucleotides CA264_15350 and CA264_15355 are separated by 181 nucleotides CA264_15355 and CA264_15360 are separated by 246 nucleotides
CA264_15345: CA264_15345 - ferrous iron transporter B, at 3,594,232 to 3,596,385
_15345
CA264_15350: CA264_15350 - ferrous iron transport protein A, at 3,596,395 to 3,596,646
_15350
CA264_15355: CA264_15355 - bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase, at 3,596,828 to 3,599,284
_15355
CA264_15360: CA264_15360 - permease, at 3,599,531 to 3,600,478
_15360
Position (kb)
3596
3597
3598
3599
3600 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3596.377 kb on + strand at 3596.651 kb on + strand at 3596.661 kb on + strand at 3596.984 kb on + strand at 3596.996 kb on - strand at 3596.996 kb on - strand at 3597.329 kb on - strand, within CA264_15355 at 3597.567 kb on + strand, within CA264_15355 at 3597.621 kb on + strand, within CA264_15355 at 3598.569 kb on - strand, within CA264_15355 at 3599.107 kb on - strand at 3599.334 kb on + strand at 3599.513 kb on + strand at 3599.514 kb on - strand at 3599.516 kb on - strand at 3599.543 kb on - strand at 3599.559 kb on - strand at 3599.585 kb on - strand at 3599.596 kb on + strand at 3599.596 kb on + strand at 3599.736 kb on + strand, within CA264_15360 at 3599.828 kb on + strand, within CA264_15360 at 3599.842 kb on + strand, within CA264_15360 at 3599.849 kb on - strand, within CA264_15360 at 3599.887 kb on + strand, within CA264_15360 at 3600.024 kb on + strand, within CA264_15360 at 3600.044 kb on + strand, within CA264_15360 at 3600.045 kb on - strand, within CA264_15360 at 3600.139 kb on + strand, within CA264_15360
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 3,596,377 + +0.1 3,596,651 + +2.8 3,596,661 + +2.7 3,596,984 + -0.8 3,596,996 - -1.3 3,596,996 - -2.2 3,597,329 - CA264_15355 0.20 -4.1 3,597,567 + CA264_15355 0.30 -0.8 3,597,621 + CA264_15355 0.32 -1.2 3,598,569 - CA264_15355 0.71 -1.1 3,599,107 - -2.1 3,599,334 + +0.9 3,599,513 + +0.3 3,599,514 - +0.8 3,599,516 - +1.5 3,599,543 - -2.7 3,599,559 - -0.2 3,599,585 - -0.1 3,599,596 + -0.3 3,599,596 + -0.4 3,599,736 + CA264_15360 0.22 +0.5 3,599,828 + CA264_15360 0.31 -0.2 3,599,842 + CA264_15360 0.33 -0.4 3,599,849 - CA264_15360 0.34 -0.6 3,599,887 + CA264_15360 0.38 -0.5 3,600,024 + CA264_15360 0.52 -1.9 3,600,044 + CA264_15360 0.54 -0.2 3,600,045 - CA264_15360 0.54 -0.4 3,600,139 + CA264_15360 0.64 -1.5
Or see this region's nucleotide sequence