Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15165 and CA264_15170 are separated by 23 nucleotides CA264_15170 and CA264_15175 are separated by 19 nucleotides CA264_15175 and CA264_15180 are separated by 3 nucleotides
CA264_15165: CA264_15165 - flagellar motor protein MotA, at 3,555,290 to 3,556,156
_15165
CA264_15170: CA264_15170 - biopolymer transporter ExbD, at 3,556,180 to 3,556,785
_15170
CA264_15175: CA264_15175 - biopolymer transporter ExbD, at 3,556,805 to 3,557,329
_15175
CA264_15180: CA264_15180 - energy transducer TonB, at 3,557,333 to 3,558,163
_15180
Position (kb)
3556
3557
3558 Strain fitness (log2 ratio)
-2
-1
0
1 at 3555.857 kb on - strand, within CA264_15165 at 3555.865 kb on + strand, within CA264_15165 at 3555.904 kb on + strand, within CA264_15165 at 3555.904 kb on + strand, within CA264_15165 at 3555.910 kb on + strand, within CA264_15165 at 3556.241 kb on + strand, within CA264_15170 at 3556.266 kb on + strand, within CA264_15170 at 3556.305 kb on - strand, within CA264_15170 at 3556.311 kb on + strand, within CA264_15170 at 3556.312 kb on - strand, within CA264_15170 at 3556.380 kb on + strand, within CA264_15170 at 3556.427 kb on + strand, within CA264_15170 at 3556.597 kb on - strand, within CA264_15170 at 3556.626 kb on - strand, within CA264_15170 at 3556.783 kb on + strand at 3556.784 kb on - strand at 3556.804 kb on - strand at 3557.069 kb on + strand, within CA264_15175 at 3557.235 kb on + strand, within CA264_15175 at 3557.344 kb on + strand at 3557.408 kb on + strand at 3557.660 kb on - strand, within CA264_15180 at 3557.838 kb on + strand, within CA264_15180 at 3557.857 kb on + strand, within CA264_15180 at 3557.857 kb on + strand, within CA264_15180 at 3557.861 kb on + strand, within CA264_15180 at 3557.977 kb on - strand, within CA264_15180 at 3558.161 kb on + strand at 3558.247 kb on + strand at 3558.250 kb on + strand at 3558.251 kb on - strand at 3558.251 kb on - strand at 3558.255 kb on - strand at 3558.327 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 3,555,857 - CA264_15165 0.65 -0.7 3,555,865 + CA264_15165 0.66 -0.6 3,555,904 + CA264_15165 0.71 -0.2 3,555,904 + CA264_15165 0.71 -1.6 3,555,910 + CA264_15165 0.72 +1.1 3,556,241 + CA264_15170 0.10 -1.5 3,556,266 + CA264_15170 0.14 -1.6 3,556,305 - CA264_15170 0.21 -0.5 3,556,311 + CA264_15170 0.22 -1.4 3,556,312 - CA264_15170 0.22 +0.1 3,556,380 + CA264_15170 0.33 -2.7 3,556,427 + CA264_15170 0.41 -0.7 3,556,597 - CA264_15170 0.69 -0.5 3,556,626 - CA264_15170 0.74 -2.1 3,556,783 + -0.9 3,556,784 - +0.3 3,556,804 - -0.9 3,557,069 + CA264_15175 0.50 +0.5 3,557,235 + CA264_15175 0.82 -0.6 3,557,344 + -1.2 3,557,408 + -0.8 3,557,660 - CA264_15180 0.39 -0.5 3,557,838 + CA264_15180 0.61 +0.7 3,557,857 + CA264_15180 0.63 -1.4 3,557,857 + CA264_15180 0.63 -0.7 3,557,861 + CA264_15180 0.64 -0.9 3,557,977 - CA264_15180 0.77 -0.7 3,558,161 + -1.0 3,558,247 + -1.0 3,558,250 + -0.7 3,558,251 - +0.8 3,558,251 - -2.4 3,558,255 - -1.4 3,558,327 + -0.5
Or see this region's nucleotide sequence