Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15060 and CA264_15065 are separated by 239 nucleotides CA264_15065 and CA264_15070 are separated by 107 nucleotides CA264_15070 and CA264_15075 are separated by 72 nucleotides
CA264_15060: CA264_15060 - long-chain fatty acid--CoA ligase, at 3,536,036 to 3,537,793
_15060
CA264_15065: CA264_15065 - formiminoglutamase, at 3,538,033 to 3,539,199
_15065
CA264_15070: CA264_15070 - cytochrome b5, at 3,539,307 to 3,539,567
_15070
CA264_15075: CA264_15075 - hypothetical protein, at 3,539,640 to 3,540,506
_15075
Position (kb)
3538
3539
3540 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3537.072 kb on + strand, within CA264_15060 at 3537.072 kb on + strand, within CA264_15060 at 3537.073 kb on - strand, within CA264_15060 at 3537.076 kb on - strand, within CA264_15060 at 3537.076 kb on - strand, within CA264_15060 at 3537.076 kb on - strand, within CA264_15060 at 3537.080 kb on - strand, within CA264_15060 at 3537.080 kb on - strand, within CA264_15060 at 3537.099 kb on + strand, within CA264_15060 at 3537.106 kb on - strand, within CA264_15060 at 3537.106 kb on - strand, within CA264_15060 at 3537.265 kb on - strand, within CA264_15060 at 3537.265 kb on - strand, within CA264_15060 at 3537.269 kb on - strand, within CA264_15060 at 3537.269 kb on - strand, within CA264_15060 at 3537.269 kb on - strand, within CA264_15060 at 3537.377 kb on + strand, within CA264_15060 at 3537.394 kb on - strand, within CA264_15060 at 3537.518 kb on + strand, within CA264_15060 at 3537.604 kb on + strand, within CA264_15060 at 3537.604 kb on + strand, within CA264_15060 at 3537.604 kb on + strand, within CA264_15060 at 3537.611 kb on + strand, within CA264_15060 at 3537.824 kb on + strand at 3537.825 kb on - strand at 3537.825 kb on - strand at 3537.825 kb on - strand at 3537.825 kb on - strand at 3537.825 kb on - strand at 3537.828 kb on + strand at 3537.918 kb on - strand at 3537.940 kb on - strand at 3537.946 kb on - strand at 3537.953 kb on + strand at 3537.958 kb on - strand at 3537.958 kb on - strand at 3537.986 kb on - strand at 3537.994 kb on + strand at 3538.010 kb on + strand at 3538.011 kb on - strand at 3538.033 kb on - strand at 3538.342 kb on + strand, within CA264_15065 at 3538.427 kb on - strand, within CA264_15065 at 3538.724 kb on + strand, within CA264_15065 at 3538.865 kb on - strand, within CA264_15065 at 3538.871 kb on - strand, within CA264_15065 at 3539.284 kb on + strand at 3539.285 kb on - strand at 3539.302 kb on - strand at 3539.302 kb on - strand at 3539.382 kb on + strand, within CA264_15070 at 3539.397 kb on + strand, within CA264_15070 at 3539.398 kb on - strand, within CA264_15070 at 3539.398 kb on - strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.405 kb on - strand, within CA264_15070 at 3539.405 kb on - strand, within CA264_15070 at 3539.405 kb on - strand, within CA264_15070 at 3539.477 kb on - strand, within CA264_15070 at 3539.565 kb on + strand at 3539.566 kb on - strand at 3539.589 kb on + strand at 3539.590 kb on - strand at 3539.590 kb on - strand at 3539.601 kb on - strand at 3539.618 kb on + strand at 3539.628 kb on + strand at 3539.628 kb on + strand at 3539.632 kb on + strand at 3539.632 kb on + strand at 3539.632 kb on + strand at 3539.633 kb on - strand at 3539.634 kb on + strand at 3539.634 kb on + strand at 3539.635 kb on - strand at 3539.635 kb on - strand at 3539.648 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 3,537,072 + CA264_15060 0.59 -0.5 3,537,072 + CA264_15060 0.59 -0.2 3,537,073 - CA264_15060 0.59 -0.3 3,537,076 - CA264_15060 0.59 -0.3 3,537,076 - CA264_15060 0.59 -0.8 3,537,076 - CA264_15060 0.59 -0.3 3,537,080 - CA264_15060 0.59 -0.4 3,537,080 - CA264_15060 0.59 +0.7 3,537,099 + CA264_15060 0.60 -0.4 3,537,106 - CA264_15060 0.61 -0.8 3,537,106 - CA264_15060 0.61 -0.8 3,537,265 - CA264_15060 0.70 -0.4 3,537,265 - CA264_15060 0.70 -1.1 3,537,269 - CA264_15060 0.70 +0.0 3,537,269 - CA264_15060 0.70 +0.3 3,537,269 - CA264_15060 0.70 +1.7 3,537,377 + CA264_15060 0.76 -0.3 3,537,394 - CA264_15060 0.77 -0.1 3,537,518 + CA264_15060 0.84 -0.4 3,537,604 + CA264_15060 0.89 -0.4 3,537,604 + CA264_15060 0.89 +1.9 3,537,604 + CA264_15060 0.89 -0.6 3,537,611 + CA264_15060 0.90 -0.2 3,537,824 + -1.7 3,537,825 - +0.3 3,537,825 - +0.0 3,537,825 - +0.4 3,537,825 - +0.7 3,537,825 - -0.0 3,537,828 + -0.0 3,537,918 - +0.6 3,537,940 - -0.4 3,537,946 - +1.1 3,537,953 + -0.8 3,537,958 - -1.7 3,537,958 - -0.1 3,537,986 - +0.3 3,537,994 + -0.6 3,538,010 + +1.3 3,538,011 - -1.5 3,538,033 - -0.5 3,538,342 + CA264_15065 0.26 -0.2 3,538,427 - CA264_15065 0.34 +0.2 3,538,724 + CA264_15065 0.59 -0.5 3,538,865 - CA264_15065 0.71 -1.4 3,538,871 - CA264_15065 0.72 -2.1 3,539,284 + +0.8 3,539,285 - +0.3 3,539,302 - +0.5 3,539,302 - +0.1 3,539,382 + CA264_15070 0.29 +1.2 3,539,397 + CA264_15070 0.34 +0.3 3,539,398 - CA264_15070 0.35 -1.0 3,539,398 - CA264_15070 0.35 -0.1 3,539,404 + CA264_15070 0.37 -0.1 3,539,404 + CA264_15070 0.37 +0.1 3,539,404 + CA264_15070 0.37 +0.4 3,539,404 + CA264_15070 0.37 -0.0 3,539,405 - CA264_15070 0.38 +0.8 3,539,405 - CA264_15070 0.38 +0.0 3,539,405 - CA264_15070 0.38 +0.5 3,539,477 - CA264_15070 0.65 +0.0 3,539,565 + +0.5 3,539,566 - -0.4 3,539,589 + -0.3 3,539,590 - -0.4 3,539,590 - -0.0 3,539,601 - -0.4 3,539,618 + +0.4 3,539,628 + +0.2 3,539,628 + -0.5 3,539,632 + -0.0 3,539,632 + -0.3 3,539,632 + -0.0 3,539,633 - +0.7 3,539,634 + -0.5 3,539,634 + -0.1 3,539,635 - -0.0 3,539,635 - -1.1 3,539,648 - -0.4
Or see this region's nucleotide sequence