Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_14825

Experiment: m.b. Nalidixic 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.016 mg/ml
3,479,148	-				-0.6
3,479,159	+				-1.2
3,479,174	+				+0.4
3,479,174	+				-1.6
3,479,179	+				-1.1
3,479,194	+				+0.1
3,479,194	+				-0.0
3,479,217	-				-0.4
3,479,220	+				-1.4
3,479,284	+				-0.5
3,479,284	+				-1.0
3,479,284	+				+0.3
3,479,284	+				-0.4
3,479,285	-				+0.5
3,479,285	-				-0.7
3,479,298	+				+0.4
3,479,298	+				-0.9
3,479,302	+				-0.4
3,479,302	+				-0.2
3,479,318	+				-1.1
3,479,318	+				-0.4
3,479,330	-				-0.5
3,479,340	+				-0.9
3,479,341	-				-0.0
3,479,342	+				-0.7
3,479,342	+				-1.0
3,479,342	+				-0.8
3,479,377	-		CA264_14815	0.13	-0.3
3,479,495	-		CA264_14815	0.64	+0.7
3,479,562	+				-1.1
3,479,610	+				-1.5
3,479,631	-				-1.6
3,479,664	-				-0.9
3,479,737	+				-1.0
3,479,737	+				-1.6
3,479,738	-				-0.7
3,479,765	-				-0.9
3,479,822	+		CA264_14820	0.25	-0.6
3,479,822	+		CA264_14820	0.25	-1.0
3,479,823	-		CA264_14820	0.26	-0.4
3,479,823	-		CA264_14820	0.26	-0.5
3,479,823	-		CA264_14820	0.26	-0.8
3,479,833	-		CA264_14820	0.29	-0.6
3,479,858	+		CA264_14820	0.36	+0.3
3,479,858	+		CA264_14820	0.36	-1.3
3,479,858	+		CA264_14820	0.36	-0.7
3,479,858	+		CA264_14820	0.36	-1.2
3,479,859	-		CA264_14820	0.37	-1.2
3,479,859	-		CA264_14820	0.37	-1.5
3,479,891	+		CA264_14820	0.46	-0.9
3,479,891	+		CA264_14820	0.46	-0.0
3,479,891	+		CA264_14820	0.46	+0.0
3,479,893	+		CA264_14820	0.47	-0.3
3,479,894	-		CA264_14820	0.47	-1.0
3,479,896	+		CA264_14820	0.48	-1.1
3,479,896	+		CA264_14820	0.48	-1.5
3,479,896	+		CA264_14820	0.48	-0.2
3,479,897	-		CA264_14820	0.48	-0.7
3,479,897	-		CA264_14820	0.48	-0.0
3,479,897	-		CA264_14820	0.48	-0.3
3,479,897	-		CA264_14820	0.48	-0.0
3,479,897	-		CA264_14820	0.48	+0.1
3,479,897	-		CA264_14820	0.48	-2.0
3,479,924	-		CA264_14820	0.56	-0.3
3,479,933	+		CA264_14820	0.59	-1.0
3,480,050	+				+3.4
3,480,050	+				-1.1
3,480,050	+				-0.8
3,480,051	-				+0.9
3,480,051	-				-0.2
3,480,051	-				-1.5
3,480,054	+				-0.7
3,480,054	+				-1.0
3,480,054	+				+0.0
3,480,054	+				-0.9
3,480,054	+				-1.8
3,480,055	-				-1.8
3,480,065	+				-1.4
3,480,074	+				+0.3
3,480,074	+				-1.3
3,480,074	+				-0.3
3,480,075	-				-0.3
3,480,075	-				-0.6
3,480,075	-				-0.3
3,480,075	-				-0.2
3,480,075	-				+0.6
3,480,075	-				+0.2
3,480,079	-				-1.0
3,480,151	-				-0.7
3,480,153	+				-1.0
3,480,156	+				+0.1
3,480,156	+				-2.3
3,480,157	-				+0.6
3,480,157	-				-0.8
3,480,232	-		CA264_14825	0.23	+0.1
3,480,255	+		CA264_14825	0.29	-1.0
3,480,255	+		CA264_14825	0.29	-1.2
3,480,256	-		CA264_14825	0.29	+1.1
3,480,256	-		CA264_14825	0.29	-0.6
3,480,261	-		CA264_14825	0.30	-0.2
3,480,283	+		CA264_14825	0.36	-1.6
3,480,285	+		CA264_14825	0.36	-1.0
3,480,286	-		CA264_14825	0.36	-0.1
3,480,286	-		CA264_14825	0.36	-0.4
3,480,286	-		CA264_14825	0.36	-0.4
3,480,286	-		CA264_14825	0.36	-0.1
3,480,290	+		CA264_14825	0.37	-0.7
3,480,291	-		CA264_14825	0.37	-1.0
3,480,297	+		CA264_14825	0.39	-2.7
3,480,308	+		CA264_14825	0.42	-1.3
3,480,308	+		CA264_14825	0.42	-1.2
3,480,309	-		CA264_14825	0.42	-2.3
3,480,314	+		CA264_14825	0.43	-0.8
3,480,314	+		CA264_14825	0.43	-0.8
3,480,315	-		CA264_14825	0.43	-0.1
3,480,315	-		CA264_14825	0.43	-0.3
3,480,315	-		CA264_14825	0.43	-0.0
3,480,450	+		CA264_14825	0.76	-1.7
3,480,450	+		CA264_14825	0.76	-1.7
3,480,450	+		CA264_14825	0.76	-2.1
3,480,450	+		CA264_14825	0.76	-1.8
3,480,451	-		CA264_14825	0.76	+0.2
3,480,451	-		CA264_14825	0.76	-1.5
3,480,523	+				-0.1
3,480,524	-				-0.3
3,480,524	-				-0.3
3,480,525	+				-1.1
3,480,530	-				-0.5
3,480,554	-				+0.0
3,480,586	-				-0.5
3,480,586	-				-0.7
3,480,636	-				-1.3
3,480,636	-				-2.8
3,480,640	+				-1.7
3,480,641	-				-1.4
3,480,643	-				-1.2
3,480,643	-				-0.9
3,480,645	+				-2.5
3,480,646	-				-2.8
3,480,646	-				-2.7
3,480,646	-				-3.1
3,480,646	-				+1.7
3,480,650	+				-2.0
3,480,650	+				-2.1
3,480,650	+				-1.9
3,480,651	-				-1.7
3,480,710	-				+1.1
3,480,710	-				-1.6
3,480,731	-				-1.0
3,480,731	-				-1.8
3,480,753	-				-0.9
3,480,753	-				-1.3
3,480,787	+				-1.1
3,480,788	-				-2.2
3,480,788	-				-1.4
3,480,819	+				-1.8
3,480,819	+				-2.1
3,480,823	+				-1.1
3,480,857	-				-0.9
3,480,899	-				-0.4
3,480,920	-				-1.1
3,480,967	-				-0.8
3,480,968	+				-0.7
3,480,969	-				+0.3
3,480,969	-				+0.5
3,480,969	-				+0.2
3,480,971	+				-0.7
3,480,971	+				-1.2
3,480,971	+				-2.4
3,480,972	-				-1.5
3,480,972	-				-0.1
3,480,972	-				-1.0
3,480,972	-				-0.9
3,480,972	-				-0.7
3,480,973	+				-1.7
3,480,989	-				-2.5
3,480,994	+				+0.3
3,480,994	+				-1.8
3,480,999	+				-1.0
3,480,999	+				-1.5
3,481,000	-				-2.0
3,481,000	-				-0.4
3,481,018	+				-2.7
3,481,018	+				-1.5
3,481,019	-				-1.8
3,481,019	-				-2.1
3,481,087	+				+1.7
3,481,088	-				-1.2
3,481,091	+				-2.2
3,481,091	+				-1.2
3,481,092	-				-0.2
3,481,101	+				-1.5
3,481,101	+				-1.3
3,481,101	+				-1.6
3,481,105	+				-1.3
3,481,105	+				+0.3
3,481,120	-				+0.3
3,481,200	-		CA264_14830	0.12	-1.0
3,481,209	-		CA264_14830	0.13	-0.4
3,481,209	-		CA264_14830	0.13	+0.1
3,481,212	-		CA264_14830	0.13	+0.2
3,481,217	-		CA264_14830	0.13	-1.0
3,481,332	-		CA264_14830	0.16	-0.9
3,481,398	-		CA264_14830	0.19	-1.3
3,481,398	-		CA264_14830	0.19	-1.2
3,481,398	-		CA264_14830	0.19	-1.4
3,481,399	+		CA264_14830	0.19	-1.7
3,481,409	+		CA264_14830	0.19	-1.7
3,481,409	+		CA264_14830	0.19	-2.1
3,481,410	-		CA264_14830	0.19	-1.6
3,481,431	-		CA264_14830	0.20	-0.6
3,481,435	-		CA264_14830	0.20	+0.1
3,481,453	-		CA264_14830	0.20	-2.8
3,481,453	-		CA264_14830	0.20	-0.2
3,481,489	+		CA264_14830	0.21	-3.0
3,481,490	-		CA264_14830	0.21	-1.8
3,481,490	-		CA264_14830	0.21	-1.8
3,481,490	-		CA264_14830	0.21	-1.8
3,481,499	+		CA264_14830	0.22	-1.6
3,481,525	+		CA264_14830	0.23	-1.4