Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14730 and CA264_14735 are separated by 24 nucleotides CA264_14735 and CA264_14740 are separated by 23 nucleotides CA264_14740 and CA264_14745 are separated by 143 nucleotides
CA264_14730: CA264_14730 - hypothetical protein, at 3,461,306 to 3,461,728
_14730
CA264_14735: CA264_14735 - damage-inducible protein DinB, at 3,461,753 to 3,462,229
_14735
CA264_14740: CA264_14740 - dihydroorotase, at 3,462,253 to 3,463,587
_14740
CA264_14745: CA264_14745 - DEAD/DEAH box helicase, at 3,463,731 to 3,465,092
_14745
Position (kb)
3462
3463
3464 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3461.276 kb on - strand at 3461.278 kb on - strand at 3461.278 kb on - strand at 3461.279 kb on + strand at 3461.289 kb on + strand at 3461.291 kb on + strand at 3461.292 kb on - strand at 3461.294 kb on + strand at 3461.340 kb on + strand at 3461.341 kb on - strand at 3461.349 kb on - strand, within CA264_14730 at 3461.384 kb on - strand, within CA264_14730 at 3461.388 kb on + strand, within CA264_14730 at 3461.417 kb on + strand, within CA264_14730 at 3461.418 kb on - strand, within CA264_14730 at 3461.456 kb on + strand, within CA264_14730 at 3461.456 kb on + strand, within CA264_14730 at 3461.457 kb on - strand, within CA264_14730 at 3461.468 kb on + strand, within CA264_14730 at 3461.551 kb on - strand, within CA264_14730 at 3461.551 kb on - strand, within CA264_14730 at 3461.592 kb on + strand, within CA264_14730 at 3461.609 kb on + strand, within CA264_14730 at 3461.610 kb on - strand, within CA264_14730 at 3461.684 kb on + strand, within CA264_14730 at 3461.685 kb on - strand, within CA264_14730 at 3461.735 kb on + strand at 3461.749 kb on - strand at 3461.782 kb on + strand at 3461.782 kb on + strand at 3461.783 kb on - strand at 3461.783 kb on - strand at 3461.829 kb on + strand, within CA264_14735 at 3461.894 kb on - strand, within CA264_14735 at 3461.897 kb on + strand, within CA264_14735 at 3461.912 kb on + strand, within CA264_14735 at 3461.916 kb on + strand, within CA264_14735 at 3461.917 kb on - strand, within CA264_14735 at 3461.917 kb on - strand, within CA264_14735 at 3462.016 kb on + strand, within CA264_14735 at 3462.017 kb on - strand, within CA264_14735 at 3462.063 kb on + strand, within CA264_14735 at 3462.063 kb on + strand, within CA264_14735 at 3462.063 kb on + strand, within CA264_14735 at 3462.064 kb on - strand, within CA264_14735 at 3462.064 kb on - strand, within CA264_14735 at 3462.127 kb on + strand, within CA264_14735 at 3462.198 kb on + strand at 3462.199 kb on - strand at 3462.199 kb on - strand at 3462.242 kb on + strand at 3462.243 kb on - strand at 3462.251 kb on - strand at 3462.251 kb on - strand at 3462.254 kb on + strand at 3462.254 kb on + strand at 3462.254 kb on + strand at 3462.254 kb on + strand at 3462.255 kb on - strand at 3462.255 kb on - strand at 3462.342 kb on + strand at 3462.396 kb on - strand, within CA264_14740 at 3462.474 kb on - strand, within CA264_14740 at 3462.685 kb on - strand, within CA264_14740 at 3462.752 kb on - strand, within CA264_14740 at 3462.809 kb on - strand, within CA264_14740 at 3462.935 kb on + strand, within CA264_14740 at 3462.967 kb on + strand, within CA264_14740 at 3463.004 kb on + strand, within CA264_14740 at 3463.183 kb on - strand, within CA264_14740 at 3463.233 kb on - strand, within CA264_14740 at 3463.263 kb on + strand, within CA264_14740 at 3463.264 kb on - strand, within CA264_14740 at 3463.456 kb on + strand at 3463.481 kb on - strand at 3463.534 kb on - strand at 3463.537 kb on + strand at 3463.538 kb on - strand at 3463.539 kb on + strand at 3463.540 kb on - strand at 3463.540 kb on - strand at 3463.593 kb on + strand at 3463.614 kb on - strand at 3463.616 kb on + strand at 3463.671 kb on - strand at 3463.702 kb on + strand at 3463.707 kb on + strand at 3463.717 kb on + strand at 3463.718 kb on - strand at 3463.719 kb on + strand at 3463.719 kb on + strand at 3463.720 kb on - strand at 3463.724 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 3,461,276 - +0.6 3,461,278 - -0.5 3,461,278 - +0.0 3,461,279 + -0.7 3,461,289 + +0.1 3,461,291 + -1.4 3,461,292 - -0.3 3,461,294 + -0.3 3,461,340 + -0.7 3,461,341 - +0.3 3,461,349 - CA264_14730 0.10 -0.0 3,461,384 - CA264_14730 0.18 -1.0 3,461,388 + CA264_14730 0.19 -0.3 3,461,417 + CA264_14730 0.26 +2.1 3,461,418 - CA264_14730 0.26 -0.2 3,461,456 + CA264_14730 0.35 -0.1 3,461,456 + CA264_14730 0.35 +0.7 3,461,457 - CA264_14730 0.36 -0.7 3,461,468 + CA264_14730 0.38 -0.4 3,461,551 - CA264_14730 0.58 +0.3 3,461,551 - CA264_14730 0.58 -0.2 3,461,592 + CA264_14730 0.68 -1.2 3,461,609 + CA264_14730 0.72 -0.5 3,461,610 - CA264_14730 0.72 +0.0 3,461,684 + CA264_14730 0.89 -0.3 3,461,685 - CA264_14730 0.90 +1.9 3,461,735 + +0.6 3,461,749 - -0.2 3,461,782 + +0.6 3,461,782 + -0.4 3,461,783 - +0.7 3,461,783 - -0.3 3,461,829 + CA264_14735 0.16 +0.1 3,461,894 - CA264_14735 0.30 -0.6 3,461,897 + CA264_14735 0.30 +0.1 3,461,912 + CA264_14735 0.33 +0.0 3,461,916 + CA264_14735 0.34 -0.5 3,461,917 - CA264_14735 0.34 +0.3 3,461,917 - CA264_14735 0.34 -0.3 3,462,016 + CA264_14735 0.55 -0.1 3,462,017 - CA264_14735 0.55 +0.8 3,462,063 + CA264_14735 0.65 -0.2 3,462,063 + CA264_14735 0.65 -0.1 3,462,063 + CA264_14735 0.65 -0.5 3,462,064 - CA264_14735 0.65 +0.5 3,462,064 - CA264_14735 0.65 +1.8 3,462,127 + CA264_14735 0.78 -0.0 3,462,198 + -1.1 3,462,199 - +0.3 3,462,199 - -0.3 3,462,242 + +0.4 3,462,243 - -0.2 3,462,251 - -0.1 3,462,251 - -3.3 3,462,254 + +0.3 3,462,254 + +0.5 3,462,254 + +0.5 3,462,254 + -0.3 3,462,255 - -0.2 3,462,255 - +0.4 3,462,342 + -0.1 3,462,396 - CA264_14740 0.11 +0.2 3,462,474 - CA264_14740 0.17 +0.4 3,462,685 - CA264_14740 0.32 +1.4 3,462,752 - CA264_14740 0.37 +0.7 3,462,809 - CA264_14740 0.42 +0.6 3,462,935 + CA264_14740 0.51 +1.0 3,462,967 + CA264_14740 0.53 -1.4 3,463,004 + CA264_14740 0.56 +2.1 3,463,183 - CA264_14740 0.70 -1.0 3,463,233 - CA264_14740 0.73 -0.8 3,463,263 + CA264_14740 0.76 -0.8 3,463,264 - CA264_14740 0.76 +0.8 3,463,456 + +0.5 3,463,481 - +0.3 3,463,534 - -0.0 3,463,537 + +1.3 3,463,538 - +0.7 3,463,539 + -0.1 3,463,540 - +0.5 3,463,540 - +0.3 3,463,593 + +0.7 3,463,614 - +0.4 3,463,616 + -0.7 3,463,671 - +0.0 3,463,702 + +0.3 3,463,707 + +0.1 3,463,717 + -0.4 3,463,718 - +0.1 3,463,719 + -0.7 3,463,719 + +0.2 3,463,720 - -0.8 3,463,724 + -0.2
Or see this region's nucleotide sequence