Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12420

Experiment: m.b. Nalidixic 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.016 mg/ml
2,891,927	-		CA264_12415	0.24	+0.6
2,891,953	-		CA264_12415	0.27	-0.3
2,891,957	-		CA264_12415	0.27	+0.6
2,891,978	+		CA264_12415	0.29	+0.4
2,891,984	-		CA264_12415	0.29	-1.1
2,892,009	-		CA264_12415	0.31	+1.2
2,892,012	+		CA264_12415	0.32	-1.6
2,892,012	+		CA264_12415	0.32	+0.6
2,892,012	+		CA264_12415	0.32	+0.3
2,892,013	-		CA264_12415	0.32	+0.4
2,892,021	+		CA264_12415	0.32	-2.6
2,892,021	+		CA264_12415	0.32	+0.4
2,892,053	-		CA264_12415	0.35	-1.2
2,892,086	+		CA264_12415	0.38	-0.9
2,892,087	-		CA264_12415	0.38	+1.1
2,892,099	-		CA264_12415	0.39	-0.2
2,892,111	+		CA264_12415	0.40	+0.2
2,892,244	+		CA264_12415	0.51	+0.1
2,892,246	+		CA264_12415	0.51	-1.7
2,892,247	-		CA264_12415	0.51	-1.1
2,892,269	+		CA264_12415	0.53	+0.2
2,892,280	+		CA264_12415	0.54	-1.2
2,892,284	+		CA264_12415	0.55	+0.8
2,892,284	+		CA264_12415	0.55	-0.4
2,892,285	-		CA264_12415	0.55	-0.1
2,892,304	+		CA264_12415	0.56	+0.1
2,892,384	+		CA264_12415	0.63	+0.2
2,892,384	+		CA264_12415	0.63	-0.4
2,892,385	-		CA264_12415	0.63	+0.1
2,892,390	+		CA264_12415	0.64	+0.1
2,892,392	+		CA264_12415	0.64	+0.1
2,892,392	+		CA264_12415	0.64	-1.4
2,892,417	+		CA264_12415	0.66	+0.5
2,892,417	+		CA264_12415	0.66	-0.2
2,892,417	+		CA264_12415	0.66	+0.9
2,892,424	+		CA264_12415	0.66	-0.2
2,892,434	+		CA264_12415	0.67	-2.0
2,892,434	+		CA264_12415	0.67	-0.0
2,892,435	-		CA264_12415	0.67	-1.1
2,892,435	-		CA264_12415	0.67	+0.2
2,892,435	-		CA264_12415	0.67	-0.6
2,892,506	-		CA264_12415	0.73	-0.3
2,892,596	-		CA264_12415	0.81	-0.0
2,892,650	+		CA264_12415	0.86	+0.7
2,892,657	+		CA264_12415	0.86	-0.2
2,892,667	+		CA264_12415	0.87	+0.2
2,892,685	+		CA264_12415	0.88	-0.2
2,892,691	+		CA264_12415	0.89	+0.7
2,892,768	+				+0.4
2,892,768	+				+0.4
2,892,768	+				-0.0
2,892,781	+				-1.4
2,892,782	-				+0.8
2,892,782	-				+1.4
2,892,806	+				+1.4
2,892,820	+				-0.7
2,892,821	-				-0.6
2,892,823	+				-0.2
2,892,824	-				+1.3
2,892,826	-				-0.0
2,892,901	+				+0.2
2,892,905	+				+0.3
2,892,912	-				+0.7
2,892,912	-				+0.4
2,892,940	-				+1.0
2,892,980	-				+1.1
2,892,982	-				+1.2
2,892,991	-				+0.2
2,893,009	+				-0.2
2,893,018	-				-0.6
2,893,029	+				-0.9
2,893,035	+				+0.4
2,893,035	+				-0.6
2,893,045	-				+0.2
2,893,057	+				-0.8
2,893,087	+		CA264_12420	0.10	-2.3
2,893,088	-		CA264_12420	0.10	-2.2
2,893,101	+		CA264_12420	0.11	+0.5
2,893,234	+		CA264_12420	0.19	-2.8
2,893,234	+		CA264_12420	0.19	-1.6
2,893,393	+		CA264_12420	0.28	-1.2
2,893,393	+		CA264_12420	0.28	+1.1
2,893,393	+		CA264_12420	0.28	-1.5
2,893,397	+		CA264_12420	0.28	-1.2
2,893,460	+		CA264_12420	0.32	-2.0
2,893,461	-		CA264_12420	0.32	-2.5
2,893,464	+		CA264_12420	0.32	+1.2
2,893,600	-		CA264_12420	0.40	-2.0
2,893,785	-		CA264_12420	0.51	-1.9
2,893,851	+		CA264_12420	0.55	-0.9
2,894,167	-		CA264_12420	0.73	-0.2
2,894,181	+		CA264_12420	0.74	-0.3
2,894,181	+				+0.1
2,894,292	+		CA264_12420	0.80	-0.9
2,894,338	-		CA264_12420	0.83	+0.4
2,894,340	+		CA264_12420	0.83	+0.8
2,894,446	+		CA264_12420	0.89	-2.2
2,894,479	-				-0.4
2,894,549	-				-0.4
2,894,759	+				-1.6
2,894,827	+		CA264_12425	0.18	-1.0
2,894,827	+		CA264_12425	0.18	-0.6
2,894,850	+		CA264_12425	0.22	-1.4
2,894,850	+		CA264_12425	0.22	-0.8
2,894,850	+		CA264_12425	0.22	-3.4
2,894,851	-		CA264_12425	0.22	-0.7
2,894,920	+		CA264_12425	0.32	-0.6
2,894,922	+		CA264_12425	0.32	-1.2
2,894,959	-		CA264_12425	0.38	-0.9
2,894,990	+		CA264_12425	0.42	-0.3
2,895,014	+		CA264_12425	0.46	-2.4
2,895,015	-				+0.4
2,895,017	-		CA264_12425	0.46	-0.1
2,895,017	-		CA264_12425	0.46	+0.7
2,895,064	+		CA264_12425	0.53	-1.3
2,895,082	+		CA264_12425	0.56	-1.4
2,895,085	-		CA264_12425	0.56	-0.2
2,895,194	+		CA264_12425	0.72	+0.1
2,895,393	+				+0.7
2,895,393	+				+0.5
2,895,397	-				+0.8
2,895,401	+				+0.6
2,895,401	+				+0.8
2,895,402	-				+1.9
2,895,402	-				+1.4
2,895,402	-				-1.1
2,895,403	+				+0.7
2,895,403	+				+0.5
2,895,405	+				+1.5
2,895,405	+				+0.3
2,895,406	-				+1.1
2,895,406	-				+1.7
2,895,448	+				+1.8
2,895,549	-		CA264_12430	0.16	-1.3
2,895,571	-		CA264_12430	0.18	+0.7
2,895,575	+		CA264_12430	0.18	+0.6
2,895,594	-		CA264_12430	0.20	+0.2
2,895,600	+		CA264_12430	0.21	-0.4
2,895,600	+		CA264_12430	0.21	+0.5
2,895,600	+		CA264_12430	0.21	+0.1
2,895,602	+		CA264_12430	0.21	+1.0
2,895,602	+		CA264_12430	0.21	+0.8
2,895,602	+		CA264_12430	0.21	-1.5
2,895,603	-		CA264_12430	0.21	+1.5