Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10365

Experiment: m.b. Nalidixic 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_10360 and CA264_10365 overlap by 4 nucleotidesCA264_10365 and CA264_10370 are separated by 543 nucleotides CA264_10360: CA264_10360 - hypothetical protein, at 2,409,032 to 2,410,042 _10360 CA264_10365: CA264_10365 - hypothetical protein, at 2,410,039 to 2,410,245 _10365 CA264_10370: CA264_10370 - hypothetical protein, at 2,410,789 to 2,412,804 _10370 Position (kb) 2410 2411Strain fitness (log2 ratio) -3 -2 -1 0 1at 2409.225 kb on + strand, within CA264_10360at 2409.315 kb on + strand, within CA264_10360at 2409.315 kb on + strand, within CA264_10360at 2409.315 kb on + strand, within CA264_10360at 2409.327 kb on + strand, within CA264_10360at 2409.327 kb on + strand, within CA264_10360at 2409.427 kb on + strand, within CA264_10360at 2409.498 kb on + strand, within CA264_10360at 2409.498 kb on + strand, within CA264_10360at 2409.498 kb on + strand, within CA264_10360at 2409.505 kb on + strand, within CA264_10360at 2409.561 kb on + strand, within CA264_10360at 2409.645 kb on + strand, within CA264_10360at 2409.714 kb on + strand, within CA264_10360at 2410.126 kb on + strand, within CA264_10365at 2410.187 kb on + strand, within CA264_10365at 2410.348 kb on + strandat 2410.377 kb on + strandat 2410.436 kb on + strandat 2410.436 kb on + strandat 2410.445 kb on + strandat 2410.476 kb on + strandat 2410.477 kb on - strandat 2410.477 kb on - strandat 2410.477 kb on - strandat 2410.484 kb on - strandat 2410.484 kb on - strandat 2410.535 kb on + strandat 2410.544 kb on + strandat 2410.544 kb on + strandat 2410.547 kb on + strandat 2410.548 kb on - strandat 2410.593 kb on + strandat 2410.626 kb on + strandat 2410.656 kb on + strandat 2410.680 kb on + strandat 2410.744 kb on + strandat 2410.748 kb on + strandat 2410.748 kb on + strandat 2410.748 kb on + strandat 2410.749 kb on - strandat 2410.749 kb on - strandat 2410.760 kb on + strandat 2410.760 kb on + strandat 2410.760 kb on + strandat 2410.761 kb on - strandat 2410.766 kb on + strandat 2410.778 kb on + strandat 2410.778 kb on + strandat 2410.782 kb on + strandat 2410.791 kb on - strandat 2410.810 kb on + strandat 2410.850 kb on + strandat 2410.850 kb on + strandat 2410.851 kb on - strandat 2410.864 kb on + strandat 2410.866 kb on + strandat 2410.867 kb on - strandat 2410.867 kb on - strandat 2410.906 kb on - strandat 2410.918 kb on - strandat 2410.918 kb on - strandat 2410.977 kb on - strandat 2411.096 kb on + strand, within CA264_10370at 2411.096 kb on + strand, within CA264_10370at 2411.096 kb on + strand, within CA264_10370at 2411.097 kb on - strand, within CA264_10370at 2411.097 kb on - strand, within CA264_10370at 2411.097 kb on - strand, within CA264_10370at 2411.097 kb on - strand, within CA264_10370at 2411.097 kb on - strand, within CA264_10370at 2411.097 kb on - strand, within CA264_10370at 2411.183 kb on - strand, within CA264_10370at 2411.183 kb on - strand, within CA264_10370at 2411.196 kb on - strand, within CA264_10370

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml
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2,409,225 + CA264_10360 0.19 -1.7
2,409,315 + CA264_10360 0.28 -2.1
2,409,315 + CA264_10360 0.28 -1.5
2,409,315 + CA264_10360 0.28 -2.7
2,409,327 + CA264_10360 0.29 +0.8
2,409,327 + CA264_10360 0.29 -3.2
2,409,427 + CA264_10360 0.39 -2.1
2,409,498 + CA264_10360 0.46 -1.6
2,409,498 + CA264_10360 0.46 -2.8
2,409,498 + CA264_10360 0.46 -0.7
2,409,505 + CA264_10360 0.47 -1.1
2,409,561 + CA264_10360 0.52 -2.1
2,409,645 + CA264_10360 0.61 -2.6
2,409,714 + CA264_10360 0.67 +0.8
2,410,126 + CA264_10365 0.42 -0.7
2,410,187 + CA264_10365 0.71 -1.1
2,410,348 + -1.3
2,410,377 + +0.2
2,410,436 + +0.5
2,410,436 + -0.8
2,410,445 + -0.5
2,410,476 + +0.1
2,410,477 - +0.7
2,410,477 - -2.2
2,410,477 - -0.4
2,410,484 - -2.1
2,410,484 - -2.8
2,410,535 + -0.3
2,410,544 + -1.7
2,410,544 + +0.1
2,410,547 + +0.3
2,410,548 - -2.5
2,410,593 + -0.3
2,410,626 + +0.1
2,410,656 + -0.1
2,410,680 + -0.4
2,410,744 + -0.5
2,410,748 + -0.1
2,410,748 + +0.3
2,410,748 + -0.3
2,410,749 - +0.2
2,410,749 - +0.6
2,410,760 + -0.1
2,410,760 + -1.1
2,410,760 + +0.6
2,410,761 - +0.8
2,410,766 + -0.4
2,410,778 + +0.4
2,410,778 + -1.5
2,410,782 + -0.5
2,410,791 - -0.3
2,410,810 + -0.9
2,410,850 + -1.1
2,410,850 + -0.8
2,410,851 - -1.1
2,410,864 + -0.4
2,410,866 + -0.3
2,410,867 - +0.5
2,410,867 - -0.5
2,410,906 - -0.8
2,410,918 - +0.2
2,410,918 - -0.2
2,410,977 - +0.1
2,411,096 + CA264_10370 0.15 +0.2
2,411,096 + CA264_10370 0.15 +0.4
2,411,096 + CA264_10370 0.15 +0.2
2,411,097 - CA264_10370 0.15 -1.6
2,411,097 - CA264_10370 0.15 -0.9
2,411,097 - CA264_10370 0.15 +0.5
2,411,097 - CA264_10370 0.15 +0.5
2,411,097 - CA264_10370 0.15 -0.1
2,411,097 - CA264_10370 0.15 +0.4
2,411,183 - CA264_10370 0.20 -0.3
2,411,183 - CA264_10370 0.20 -0.3
2,411,196 - CA264_10370 0.20 +0.2

Or see this region's nucleotide sequence