Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07965

Experiment: m.b. Nalidixic 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.016 mg/ml
1,840,885	-		CA264_07955	0.74	-0.2
1,840,940	+		CA264_07955	0.79	-0.4
1,840,982	+		CA264_07955	0.82	+1.1
1,841,048	+		CA264_07955	0.88	-0.8
1,841,048	+		CA264_07955	0.88	-0.1
1,841,048	+		CA264_07955	0.88	+2.4
1,841,102	+				+0.3
1,841,102	+				-1.2
1,841,103	-				-0.8
1,841,130	-				-0.5
1,841,130	-				+0.6
1,841,204	+				+0.5
1,841,204	+				-0.1
1,841,213	+				-0.6
1,841,213	+				+0.1
1,841,278	-		CA264_07960	0.12	-1.0
1,841,278	-		CA264_07960	0.12	+1.9
1,841,278	-		CA264_07960	0.12	-0.0
1,841,278	-		CA264_07960	0.12	-0.0
1,841,280	+		CA264_07960	0.12	+0.6
1,841,280	+		CA264_07960	0.12	+0.8
1,841,281	-		CA264_07960	0.13	-1.4
1,841,288	-		CA264_07960	0.14	-0.4
1,841,293	-		CA264_07960	0.14	+0.5
1,841,293	-		CA264_07960	0.14	-0.5
1,841,308	-		CA264_07960	0.16	-1.9
1,841,308	-		CA264_07960	0.16	-1.0
1,841,341	-		CA264_07960	0.21	+1.0
1,841,459	+		CA264_07960	0.38	-1.5
1,841,612	-		CA264_07960	0.60	-0.9
1,841,636	+		CA264_07960	0.64	-2.0
1,841,636	+		CA264_07960	0.64	-1.1
1,841,789	+		CA264_07960	0.86	-1.0
1,841,789	+		CA264_07960	0.86	-0.1
1,841,862	+				-1.3
1,841,863	-				-0.7
1,841,870	+				+0.1
1,841,872	+				-1.1
1,841,872	+				-0.7
1,841,873	-				+0.7
1,841,873	-				-1.3
1,841,874	+				+0.3
1,841,875	-				+0.6
1,841,897	-				-0.2
1,841,943	+				-0.5
1,841,943	+				-0.1
1,841,943	+				-1.1
1,841,944	-				-0.5
1,841,959	-				+0.3
1,842,008	-				-0.0
1,842,018	+				-0.4
1,842,019	-				-1.4
1,842,060	+		CA264_07965	0.12	-0.9
1,842,061	-		CA264_07965	0.12	+0.4
1,842,091	+		CA264_07965	0.14	-0.1
1,842,092	-		CA264_07965	0.14	+0.0
1,842,131	+		CA264_07965	0.17	+0.4
1,842,131	+		CA264_07965	0.17	-1.2
1,842,131	+		CA264_07965	0.17	-0.1
1,842,132	-		CA264_07965	0.17	+0.2
1,842,132	-		CA264_07965	0.17	-2.4
1,842,132	-		CA264_07965	0.17	+0.1
1,842,133	+		CA264_07965	0.17	-0.8
1,842,134	-		CA264_07965	0.17	+0.9
1,842,153	+		CA264_07965	0.18	-1.7
1,842,156	+		CA264_07965	0.18	-1.2
1,842,159	+		CA264_07965	0.19	-0.8
1,842,197	-		CA264_07965	0.21	-1.0
1,842,222	+		CA264_07965	0.23	+1.7
1,842,226	+		CA264_07965	0.23	-0.8
1,842,226	+		CA264_07965	0.23	+0.7
1,842,226	+		CA264_07965	0.23	-0.3
1,842,226	+		CA264_07965	0.23	-0.4
1,842,227	-		CA264_07965	0.23	-1.1
1,842,227	-		CA264_07965	0.23	-1.4
1,842,227	-		CA264_07965	0.23	+0.5
1,842,229	-		CA264_07965	0.23	-1.1
1,842,229	-		CA264_07965	0.23	-1.4
1,842,229	-		CA264_07965	0.23	-0.0
1,842,237	+		CA264_07965	0.24	-0.1
1,842,237	+		CA264_07965	0.24	+0.2
1,842,238	-		CA264_07965	0.24	-0.4
1,842,238	-		CA264_07965	0.24	+0.6
1,842,238	-		CA264_07965	0.24	+0.7
1,842,286	-		CA264_07965	0.27	-0.6
1,842,286	-		CA264_07965	0.27	+0.4
1,842,327	+		CA264_07965	0.30	+0.8
1,842,338	-		CA264_07965	0.31	-2.0
1,842,338	-		CA264_07965	0.31	-0.3
1,842,338	-		CA264_07965	0.31	-1.3
1,842,465	+		CA264_07965	0.39	-1.4
1,842,466	-		CA264_07965	0.39	-0.5
1,842,466	-		CA264_07965	0.39	+0.1
1,842,478	-		CA264_07965	0.40	-2.6
1,842,514	+		CA264_07965	0.42	-0.8
1,842,625	+		CA264_07965	0.50	-0.8
1,842,636	+		CA264_07965	0.50	+1.0
1,842,637	-		CA264_07965	0.50	-0.5
1,842,652	+		CA264_07965	0.51	-0.8
1,842,652	+		CA264_07965	0.51	-1.0
1,842,655	-		CA264_07965	0.52	-1.5
1,842,661	-		CA264_07965	0.52	-0.6
1,842,661	-		CA264_07965	0.52	-0.1
1,842,661	-		CA264_07965	0.52	-0.1
1,842,661	-		CA264_07965	0.52	-0.6
1,842,701	+		CA264_07965	0.55	+0.1
1,842,701	+		CA264_07965	0.55	+0.1
1,842,702	-		CA264_07965	0.55	-0.3
1,842,705	+		CA264_07965	0.55	-0.4
1,842,706	-		CA264_07965	0.55	+0.8
1,842,706	-		CA264_07965	0.55	-0.8
1,842,771	+		CA264_07965	0.59	-0.9
1,842,839	-		CA264_07965	0.64	+0.4
1,842,882	+		CA264_07965	0.67	-2.0
1,842,893	-		CA264_07965	0.67	-0.0
1,842,905	-		CA264_07965	0.68	-0.7
1,842,925	-		CA264_07965	0.70	-1.4
1,842,954	+		CA264_07965	0.72	-0.3
1,842,962	-		CA264_07965	0.72	-1.3
1,843,015	-		CA264_07965	0.76	-1.5
1,843,019	+		CA264_07965	0.76	-0.8
1,843,041	-		CA264_07965	0.77	+0.3
1,843,070	+		CA264_07965	0.79	-0.7
1,843,070	+		CA264_07965	0.79	-1.6
1,843,084	+		CA264_07965	0.80	-0.9
1,843,084	+		CA264_07965	0.80	-1.1
1,843,114	-		CA264_07965	0.82	+0.4
1,843,151	+		CA264_07965	0.85	-0.6
1,843,151	+		CA264_07965	0.85	-1.8
1,843,152	-		CA264_07965	0.85	-0.5
1,843,222	-		CA264_07965	0.89	-1.8
1,843,249	-				-1.2
1,843,266	+				-0.8
1,843,266	+				+0.3
1,843,354	+				-0.4
1,843,379	+				-0.1
1,843,389	+				-1.5
1,843,389	+				-0.5
1,843,390	-				-0.4
1,843,390	-				-0.1
1,843,391	+				-0.3
1,843,391	+				-0.2
1,843,392	-				+0.4
1,843,392	-				-0.2
1,843,392	-				-0.3
1,843,392	-				+0.4
1,843,396	+				-0.3
1,843,396	+				+0.4
1,843,397	-				-0.1
1,843,397	-				+0.6
1,843,411	+				-0.4
1,843,424	-				-1.1
1,843,425	+				+0.6
1,843,426	-				-0.3
1,843,571	-		CA264_07970	0.15	-0.7
1,843,615	+		CA264_07970	0.20	-0.4
1,843,616	-		CA264_07970	0.20	-0.4
1,843,709	-		CA264_07970	0.30	+0.7
1,843,750	+		CA264_07970	0.34	+0.1
1,843,750	+		CA264_07970	0.34	-0.2
1,843,751	-		CA264_07970	0.35	+0.2
1,843,751	-		CA264_07970	0.35	-0.8
1,843,756	-		CA264_07970	0.35	-1.2
1,843,763	+		CA264_07970	0.36	-0.2
1,843,763	+		CA264_07970	0.36	-0.2
1,843,764	-		CA264_07970	0.36	-0.4
1,843,764	-		CA264_07970	0.36	-0.7
1,843,784	+		CA264_07970	0.38	-1.8
1,843,784	+		CA264_07970	0.38	-0.3
1,843,786	+		CA264_07970	0.38	+0.4
1,843,831	+		CA264_07970	0.43	-1.7
1,843,850	+		CA264_07970	0.45	+0.1
1,843,850	+		CA264_07970	0.45	-1.1
1,843,906	+		CA264_07970	0.51	-0.2
1,843,906	+		CA264_07970	0.51	-0.2
1,843,911	+		CA264_07970	0.52	-0.1
1,843,912	-		CA264_07970	0.52	-0.1
1,843,948	+		CA264_07970	0.56	-0.8
1,843,953	+		CA264_07970	0.56	+1.0
1,843,954	-		CA264_07970	0.56	-1.5
1,844,044	-		CA264_07970	0.66	-0.1
1,844,114	+		CA264_07970	0.74	+0.0
1,844,120	-		CA264_07970	0.74	-1.2
1,844,181	+		CA264_07970	0.81	-0.4
1,844,235	+		CA264_07970	0.87	-1.4
1,844,235	+		CA264_07970	0.87	-0.6
1,844,236	-		CA264_07970	0.87	-1.5
1,844,236	-		CA264_07970	0.87	+0.9
1,844,236	-		CA264_07970	0.87	-1.9
1,844,330	+				-1.6
1,844,330	+				+1.7
1,844,330	+				+0.4
1,844,357	+				+0.3
1,844,358	-				+1.5
1,844,358	-				+0.2
1,844,361	-				-0.7
1,844,363	+				-1.3
1,844,364	-				-0.3
1,844,364	-				-0.7