Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07585 and CA264_07590 are separated by 99 nucleotides CA264_07590 and CA264_07595 are separated by 34 nucleotides
CA264_07585: CA264_07585 - hypothetical protein, at 1,758,578 to 1,759,390
_07585
CA264_07590: CA264_07590 - hypothetical protein, at 1,759,490 to 1,760,134
_07590
CA264_07595: CA264_07595 - chemotaxis protein CheA, at 1,760,169 to 1,761,809
_07595
Position (kb)
1759
1760
1761 Strain fitness (log2 ratio)
-1
0
1
2 at 1758.505 kb on + strand at 1758.505 kb on + strand at 1758.544 kb on + strand at 1758.545 kb on - strand at 1758.615 kb on - strand at 1758.748 kb on + strand, within CA264_07585 at 1758.756 kb on + strand, within CA264_07585 at 1758.757 kb on - strand, within CA264_07585 at 1758.759 kb on + strand, within CA264_07585 at 1758.760 kb on - strand, within CA264_07585 at 1758.852 kb on + strand, within CA264_07585 at 1758.871 kb on + strand, within CA264_07585 at 1758.877 kb on - strand, within CA264_07585 at 1758.935 kb on + strand, within CA264_07585 at 1758.955 kb on + strand, within CA264_07585 at 1759.028 kb on - strand, within CA264_07585 at 1759.071 kb on + strand, within CA264_07585 at 1759.159 kb on + strand, within CA264_07585 at 1759.160 kb on - strand, within CA264_07585 at 1759.273 kb on - strand, within CA264_07585 at 1759.317 kb on - strand at 1759.410 kb on + strand at 1759.410 kb on + strand at 1759.410 kb on + strand at 1759.410 kb on + strand at 1759.411 kb on - strand at 1759.411 kb on - strand at 1759.414 kb on + strand at 1759.415 kb on - strand at 1759.415 kb on - strand at 1759.415 kb on - strand at 1759.466 kb on + strand at 1759.476 kb on + strand at 1759.477 kb on - strand at 1759.477 kb on - strand at 1759.540 kb on + strand at 1759.603 kb on + strand, within CA264_07590 at 1759.604 kb on - strand, within CA264_07590 at 1759.628 kb on + strand, within CA264_07590 at 1759.673 kb on - strand, within CA264_07590 at 1759.691 kb on + strand, within CA264_07590 at 1759.726 kb on - strand, within CA264_07590 at 1759.726 kb on - strand, within CA264_07590 at 1759.729 kb on + strand, within CA264_07590 at 1759.877 kb on - strand, within CA264_07590 at 1759.877 kb on - strand, within CA264_07590 at 1759.877 kb on - strand, within CA264_07590 at 1759.959 kb on + strand, within CA264_07590 at 1759.959 kb on + strand, within CA264_07590 at 1760.024 kb on + strand, within CA264_07590 at 1760.085 kb on - strand at 1760.095 kb on + strand at 1760.095 kb on + strand at 1760.099 kb on - strand at 1760.203 kb on - strand at 1760.211 kb on + strand at 1760.264 kb on - strand at 1760.264 kb on - strand at 1760.267 kb on + strand at 1760.302 kb on - strand at 1760.330 kb on + strand at 1760.331 kb on - strand at 1760.334 kb on + strand, within CA264_07595 at 1760.335 kb on - strand, within CA264_07595 at 1760.335 kb on - strand, within CA264_07595 at 1760.340 kb on + strand, within CA264_07595 at 1760.378 kb on + strand, within CA264_07595 at 1760.379 kb on - strand, within CA264_07595 at 1760.423 kb on + strand, within CA264_07595 at 1760.463 kb on + strand, within CA264_07595 at 1760.464 kb on - strand, within CA264_07595 at 1760.556 kb on + strand, within CA264_07595 at 1760.572 kb on + strand, within CA264_07595 at 1760.572 kb on + strand, within CA264_07595 at 1760.576 kb on - strand, within CA264_07595 at 1760.618 kb on + strand, within CA264_07595 at 1760.637 kb on + strand, within CA264_07595 at 1760.688 kb on + strand, within CA264_07595 at 1760.801 kb on + strand, within CA264_07595 at 1760.801 kb on + strand, within CA264_07595 at 1760.801 kb on + strand, within CA264_07595 at 1760.833 kb on - strand, within CA264_07595
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 1,758,505 + +0.4 1,758,505 + +0.7 1,758,544 + +0.5 1,758,545 - -0.3 1,758,615 - -0.8 1,758,748 + CA264_07585 0.21 +0.6 1,758,756 + CA264_07585 0.22 -0.9 1,758,757 - CA264_07585 0.22 +0.1 1,758,759 + CA264_07585 0.22 +0.2 1,758,760 - CA264_07585 0.22 -1.2 1,758,852 + CA264_07585 0.34 -0.7 1,758,871 + CA264_07585 0.36 -1.1 1,758,877 - CA264_07585 0.37 +0.1 1,758,935 + CA264_07585 0.44 +1.1 1,758,955 + CA264_07585 0.46 +0.8 1,759,028 - CA264_07585 0.55 +0.3 1,759,071 + CA264_07585 0.61 +0.7 1,759,159 + CA264_07585 0.71 +0.5 1,759,160 - CA264_07585 0.72 +0.0 1,759,273 - CA264_07585 0.85 -1.0 1,759,317 - -1.7 1,759,410 + -0.7 1,759,410 + +0.3 1,759,410 + -0.5 1,759,410 + -0.9 1,759,411 - -1.2 1,759,411 - -0.2 1,759,414 + -1.4 1,759,415 - +0.4 1,759,415 - +0.4 1,759,415 - -0.4 1,759,466 + +0.9 1,759,476 + -1.6 1,759,477 - +1.0 1,759,477 - -0.3 1,759,540 + +0.2 1,759,603 + CA264_07590 0.18 -0.1 1,759,604 - CA264_07590 0.18 +0.9 1,759,628 + CA264_07590 0.21 +0.6 1,759,673 - CA264_07590 0.28 -1.5 1,759,691 + CA264_07590 0.31 -0.8 1,759,726 - CA264_07590 0.37 +0.8 1,759,726 - CA264_07590 0.37 -0.4 1,759,729 + CA264_07590 0.37 -1.2 1,759,877 - CA264_07590 0.60 -1.5 1,759,877 - CA264_07590 0.60 +0.3 1,759,877 - CA264_07590 0.60 +0.3 1,759,959 + CA264_07590 0.73 +0.1 1,759,959 + CA264_07590 0.73 +2.7 1,760,024 + CA264_07590 0.83 -0.3 1,760,085 - +0.4 1,760,095 + -0.1 1,760,095 + -0.6 1,760,099 - +0.2 1,760,203 - -0.5 1,760,211 + -0.7 1,760,264 - -0.4 1,760,264 - -0.2 1,760,267 + +0.3 1,760,302 - +0.7 1,760,330 + +0.5 1,760,331 - -0.4 1,760,334 + CA264_07595 0.10 -0.5 1,760,335 - CA264_07595 0.10 -1.2 1,760,335 - CA264_07595 0.10 -1.3 1,760,340 + CA264_07595 0.10 -0.3 1,760,378 + CA264_07595 0.13 -0.7 1,760,379 - CA264_07595 0.13 +0.5 1,760,423 + CA264_07595 0.15 -0.2 1,760,463 + CA264_07595 0.18 -1.1 1,760,464 - CA264_07595 0.18 -0.5 1,760,556 + CA264_07595 0.24 -0.2 1,760,572 + CA264_07595 0.25 +0.8 1,760,572 + CA264_07595 0.25 +0.4 1,760,576 - CA264_07595 0.25 -0.5 1,760,618 + CA264_07595 0.27 -0.6 1,760,637 + CA264_07595 0.29 +1.6 1,760,688 + CA264_07595 0.32 +0.5 1,760,801 + CA264_07595 0.39 +1.3 1,760,801 + CA264_07595 0.39 -0.2 1,760,801 + CA264_07595 0.39 -0.9 1,760,833 - CA264_07595 0.40 -0.1
Or see this region's nucleotide sequence